FFCP PHASE1:Hg19::chr16:77822511..77822522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57687 | |EntrezGene=57687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29315 | |HGNC=29315 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ6 | |UniProt=Q9HCJ6 | ||
|association_with_transcript=28bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | |association_with_transcript=28bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | ||
|cluster_id=chr16:77822511..77822522,+ | |||
|coexpression_cluster_id=C3590 | |||
|description=CAGE_peak_3_at_VAT1L_5end | |description=CAGE_peak_3_at_VAT1L_5end | ||
|id=chr16:77822511..77822522,+ | |id=chr16:77822511..77822522,+ | ||
|ontology_enrichment_celltype=CL:0000192!4.90e-10!42;CL:0000514!4.90e-10!42;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000359!1.40e-07!32;CL:0000055!4.96e-07!180;CL:0002539!9.22e-07!10 | |ontology_enrichment_celltype=CL:0000192!4.90e-10!42;CL:0000514!4.90e-10!42;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000359!1.40e-07!32;CL:0000055!4.96e-07!180;CL:0002539!9.22e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002539;3.13e-11;10!CL:0002322;3.13e-08;5!CL:0000359;4.60e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,9.98e-12,10;CL:0002322,5.66e-08,5;CL:0000047,2.81e-07,8;CL:0000359,3.21e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.06e-10;82!UBERON:0006241;9.98e-09;3!UBERON:0003057;9.98e-09;3!UBERON:0010122;5.99e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.49e-35!86;UBERON:0000073!2.59e-34!94;UBERON:0001016!2.59e-34!94;UBERON:0001049!8.72e-33!57;UBERON:0005068!8.72e-33!57;UBERON:0006241!8.72e-33!57;UBERON:0007135!8.72e-33!57;UBERON:0001017!3.90e-32!82;UBERON:0003075!2.63e-31!86;UBERON:0007284!2.63e-31!86;UBERON:0002346!6.70e-29!90;UBERON:0002616!8.32e-26!59;UBERON:0000955!9.47e-26!69;UBERON:0006238!9.47e-26!69;UBERON:0002780!2.45e-23!41;UBERON:0001890!2.45e-23!41;UBERON:0006240!2.45e-23!41;UBERON:0003080!1.77e-22!42;UBERON:0003056!5.54e-22!61;UBERON:0002020!7.88e-21!34;UBERON:0003528!7.88e-21!34;UBERON:0001893!1.47e-20!34;UBERON:0002791!1.37e-19!33;UBERON:0001869!2.13e-19!32;UBERON:0007023!3.21e-18!115;UBERON:0004121!2.82e-17!169;UBERON:0000033!5.71e-17!123;UBERON:0000025!1.67e-16!194;UBERON:0000924!2.63e-16!173;UBERON:0006601!2.63e-16!173;UBERON:0000153!7.20e-16!129;UBERON:0007811!7.20e-16!129;UBERON:0004111!1.38e-14!241;UBERON:0000956!1.20e-12!25;UBERON:0000203!1.20e-12!25;UBERON:0000477!2.93e-12!286;UBERON:0000483!3.26e-12!309;UBERON:0000119!3.72e-12!312;UBERON:0003076!1.75e-11!15;UBERON:0003057!1.75e-11!15;UBERON:0001950!3.71e-11!20;UBERON:0002619!4.20e-11!22;UBERON:0002049!1.41e-10!79;UBERON:0007798!1.41e-10!79;UBERON:0002308!2.11e-10!9;UBERON:0000125!2.11e-10!9;UBERON:0000468!2.59e-10!659;UBERON:0000055!3.90e-10!69;UBERON:0000467!9.68e-10!625;UBERON:0001637!1.06e-09!42;UBERON:0003509!1.06e-09!42;UBERON:0004572!1.06e-09!42;UBERON:0000480!1.21e-09!626;UBERON:0004732!1.53e-09!13;UBERON:0001981!3.48e-09!60;UBERON:0007500!3.48e-09!60;UBERON:0004537!3.48e-09!60;UBERON:0006965!3.48e-09!60;UBERON:0000475!1.14e-08!365;UBERON:0004733!1.61e-08!12;UBERON:0002028!1.61e-08!12;UBERON:0007277!1.61e-08!12;UBERON:0001135!3.14e-08!15;UBERON:0000947!3.33e-08!21;UBERON:0010191!3.33e-08!21;UBERON:0009663!3.66e-08!7;UBERON:0002420!1.14e-07!9;UBERON:0007245!1.14e-07!9;UBERON:0010009!1.14e-07!9;UBERON:0010011!1.14e-07!9;UBERON:0000454!1.14e-07!9;UBERON:0004573!3.76e-07!33;UBERON:0004571!3.76e-07!33;UBERON:0002298!4.38e-07!8;UBERON:0001009!6.15e-07!113;UBERON:0004237!9.22e-07!10;UBERON:0004695!9.22e-07!10;UBERON:0002111!9.22e-07!10;UBERON:0004178!9.22e-07!10 | |ontology_enrichment_uberon=UBERON:0005743!6.49e-35!86;UBERON:0000073!2.59e-34!94;UBERON:0001016!2.59e-34!94;UBERON:0001049!8.72e-33!57;UBERON:0005068!8.72e-33!57;UBERON:0006241!8.72e-33!57;UBERON:0007135!8.72e-33!57;UBERON:0001017!3.90e-32!82;UBERON:0003075!2.63e-31!86;UBERON:0007284!2.63e-31!86;UBERON:0002346!6.70e-29!90;UBERON:0002616!8.32e-26!59;UBERON:0000955!9.47e-26!69;UBERON:0006238!9.47e-26!69;UBERON:0002780!2.45e-23!41;UBERON:0001890!2.45e-23!41;UBERON:0006240!2.45e-23!41;UBERON:0003080!1.77e-22!42;UBERON:0003056!5.54e-22!61;UBERON:0002020!7.88e-21!34;UBERON:0003528!7.88e-21!34;UBERON:0001893!1.47e-20!34;UBERON:0002791!1.37e-19!33;UBERON:0001869!2.13e-19!32;UBERON:0007023!3.21e-18!115;UBERON:0004121!2.82e-17!169;UBERON:0000033!5.71e-17!123;UBERON:0000025!1.67e-16!194;UBERON:0000924!2.63e-16!173;UBERON:0006601!2.63e-16!173;UBERON:0000153!7.20e-16!129;UBERON:0007811!7.20e-16!129;UBERON:0004111!1.38e-14!241;UBERON:0000956!1.20e-12!25;UBERON:0000203!1.20e-12!25;UBERON:0000477!2.93e-12!286;UBERON:0000483!3.26e-12!309;UBERON:0000119!3.72e-12!312;UBERON:0003076!1.75e-11!15;UBERON:0003057!1.75e-11!15;UBERON:0001950!3.71e-11!20;UBERON:0002619!4.20e-11!22;UBERON:0002049!1.41e-10!79;UBERON:0007798!1.41e-10!79;UBERON:0002308!2.11e-10!9;UBERON:0000125!2.11e-10!9;UBERON:0000468!2.59e-10!659;UBERON:0000055!3.90e-10!69;UBERON:0000467!9.68e-10!625;UBERON:0001637!1.06e-09!42;UBERON:0003509!1.06e-09!42;UBERON:0004572!1.06e-09!42;UBERON:0000480!1.21e-09!626;UBERON:0004732!1.53e-09!13;UBERON:0001981!3.48e-09!60;UBERON:0007500!3.48e-09!60;UBERON:0004537!3.48e-09!60;UBERON:0006965!3.48e-09!60;UBERON:0000475!1.14e-08!365;UBERON:0004733!1.61e-08!12;UBERON:0002028!1.61e-08!12;UBERON:0007277!1.61e-08!12;UBERON:0001135!3.14e-08!15;UBERON:0000947!3.33e-08!21;UBERON:0010191!3.33e-08!21;UBERON:0009663!3.66e-08!7;UBERON:0002420!1.14e-07!9;UBERON:0007245!1.14e-07!9;UBERON:0010009!1.14e-07!9;UBERON:0010011!1.14e-07!9;UBERON:0000454!1.14e-07!9;UBERON:0004573!3.76e-07!33;UBERON:0004571!3.76e-07!33;UBERON:0002298!4.38e-07!8;UBERON:0001009!6.15e-07!113;UBERON:0004237!9.22e-07!10;UBERON:0004695!9.22e-07!10;UBERON:0002111!9.22e-07!10;UBERON:0004178!9.22e-07!10 | ||
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| ||
|short_description=p3@VAT1L | |short_description=p3@VAT1L | ||
}} | }} |
Latest revision as of 22:53, 17 September 2015
Short description: | p3@VAT1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | 28bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 9.98e-12 | 10 |
embryonic stem cell | 5.66e-08 | 5 |
neuronal stem cell | 2.81e-07 | 8 |
vascular associated smooth muscle cell | 3.21e-07 | 32 |