FFCP PHASE1:Hg19::chr21:34442439..34442455,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:34442439..34442455,+ to FFCP PHASE1:Hg19::chr21:34442439..34442455,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116448 | |EntrezGene=116448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16983 | |HGNC=16983 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAK6 | |UniProt=Q8TAK6 | ||
|association_with_transcript=0bp_to_ENST00000333063,ENST00000382348,NM_138983,uc002yqz.2_5end | |||
|cluster_id=chr21:34442439..34442455,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_OLIG1_5end | |||
|id=chr21:34442439..34442455,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.25e-33!42;CL:0000860!6.15e-30!45;CL:0000766!7.97e-28!76;CL:0002194!9.97e-28!63;CL:0000576!9.97e-28!63;CL:0000040!9.97e-28!63;CL:0000559!9.97e-28!63;CL:0002009!2.98e-27!65;CL:0000763!2.53e-26!112;CL:0000049!2.53e-26!112;CL:0000839!3.42e-25!70;CL:0000557!2.96e-23!71;CL:0000037!5.06e-18!172;CL:0000566!5.06e-18!172;CL:0002032!2.76e-17!165;CL:0000837!2.76e-17!165;CL:0002087!1.09e-15!119;CL:0000988!1.76e-15!182;CL:0000738!3.06e-15!140;CL:0002031!6.13e-14!124;CL:0002393!4.28e-07!9;CL:0002397!4.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-33;33!CL:0002057;1.41e-33;33!CL:0000576;1.18e-28;48!CL:0000473;4.23e-26;39!CL:0000234;4.23e-26;39!CL:0000766;1.55e-20;69!CL:0000763;7.05e-12;100!CL:0002087;2.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-44,42;CL:0002057,2.03e-44,42;CL:0000473,2.76e-42,48;CL:0000234,2.76e-42,48;CL:0000766,2.83e-39,72;CL:0002194,1.71e-38,59;CL:0000576,1.71e-38,59;CL:0000040,1.71e-38,59;CL:0000559,1.71e-38,59;CL:0002009,1.08e-36,61;CL:0000839,1.59e-35,66;CL:0000763,3.96e-33,108;CL:0000049,3.96e-33,108;CL:0000557,6.06e-32,67;CL:0000037,1.76e-19,168;CL:0002032,6.98e-19,161;CL:0000837,6.98e-19,161;CL:0000738,2.92e-18,136;CL:0002087,3.21e-18,115;CL:0000988,2.06e-17,177;CL:0002031,7.55e-16,120;CL:0002393,5.21e-09,9;CL:0002397,5.21e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.67e-32;42!CL:0000049;8.40e-11;108!UBERON:0006601;6.41e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-44!115;UBERON:0001049!1.62e-42!57;UBERON:0005068!1.62e-42!57;UBERON:0006241!1.62e-42!57;UBERON:0007135!1.62e-42!57;UBERON:0001017!1.66e-38!82;UBERON:0005743!1.42e-36!86;UBERON:0002616!2.49e-34!59;UBERON:0000073!4.17e-32!94;UBERON:0001016!4.17e-32!94;UBERON:0003080!4.90e-32!42;UBERON:0002780!1.09e-31!41;UBERON:0001890!1.09e-31!41;UBERON:0006240!1.09e-31!41;UBERON:0000955!1.27e-31!69;UBERON:0006238!1.27e-31!69;UBERON:0001893!8.90e-30!34;UBERON:0002020!9.60e-30!34;UBERON:0003528!9.60e-30!34;UBERON:0002791!7.90e-29!33;UBERON:0001869!9.70e-28!32;UBERON:0003075!1.56e-26!86;UBERON:0007284!1.56e-26!86;UBERON:0002390!1.45e-24!102;UBERON:0003061!1.45e-24!102;UBERON:0002346!2.57e-24!90;UBERON:0002193!1.11e-21!112;UBERON:0000956!3.41e-21!25;UBERON:0000203!3.41e-21!25;UBERON:0002619!5.44e-20!22;UBERON:0003056!1.01e-19!61;UBERON:0002371!2.93e-19!80;UBERON:0001950!4.81e-18!20;UBERON:0001474!2.80e-17!86;UBERON:0000153!1.05e-14!129;UBERON:0007811!1.05e-14!129;UBERON:0000033!5.17e-14!123;UBERON:0004765!6.90e-13!101;UBERON:0001434!6.90e-13!101;UBERON:0004121!5.20e-12!169;UBERON:0002405!1.05e-11!115;UBERON:0003076!2.36e-11!15;UBERON:0003057!2.36e-11!15;UBERON:0000924!3.29e-11!173;UBERON:0006601!3.29e-11!173;UBERON:0002308!5.17e-10!9;UBERON:0000125!5.17e-10!9;UBERON:0002420!5.96e-10!9;UBERON:0007245!5.96e-10!9;UBERON:0010009!5.96e-10!9;UBERON:0010011!5.96e-10!9;UBERON:0000454!5.96e-10!9;UBERON:0004732!1.37e-09!13;UBERON:0004733!1.35e-08!12;UBERON:0002028!1.35e-08!12;UBERON:0007277!1.35e-08!12;UBERON:0002298!1.81e-08!8;UBERON:0009663!4.30e-08!7;UBERON:0000200!5.24e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.82e-32;34!UBERON:0003528;4.06e-32;34!UBERON:0002020;4.06e-32;34!UBERON:0001869;1.22e-31;32!UBERON:0002791;1.24e-31;32!UBERON:0002780;6.67e-29;41!UBERON:0001890;6.67e-29;41!UBERON:0000073;1.07e-27;53!UBERON:0002616;1.07e-27;53!UBERON:0002619;1.33e-26;22!UBERON:0000956;1.65e-26;25!UBERON:0000203;1.65e-26;25!UBERON:0001950;5.67e-24;20!UBERON:0001017;8.93e-19;75!UBERON:0000955;1.21e-18;68!UBERON:0001016;2.48e-16;83!UBERON:0000125;6.27e-13;9!UBERON:0002308;6.27e-13;9!UBERON:0002420;7.80e-13;9!UBERON:0007245;7.80e-13;9!UBERON:0010009;7.80e-13;9!UBERON:0010011;7.80e-13;9!UBERON:0000454;7.80e-13;9!UBERON:0007023;1.11e-10;114!UBERON:0009663;2.41e-10;7!UBERON:0004732;7.78e-10;13!UBERON:0002298;3.14e-09;6!UBERON:0000200;6.82e-09;6!UBERON:0000178;1.27e-08;15!UBERON:0000179;1.27e-08;15!UBERON:0000463;1.27e-08;15!UBERON:0004733;1.39e-08;12!UBERON:0002028;1.39e-08;12!UBERON:0000349;5.63e-08;5!UBERON:0001872;1.10e-07;5!UBERON:0002021;1.36e-07;5!UBERON:0001871;2.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.26e-52,56;UBERON:0005068,2.26e-52,56;UBERON:0006241,2.26e-52,56;UBERON:0007135,2.26e-52,56;UBERON:0000073,2.17e-48,53;UBERON:0002616,2.17e-48,53;UBERON:0001017,1.91e-47,81;UBERON:0001016,1.51e-42,89;UBERON:0002780,3.80e-41,41;UBERON:0001890,3.80e-41,41;UBERON:0003080,3.80e-41,41;UBERON:0006240,3.80e-41,41;UBERON:0000955,1.43e-40,68;UBERON:0006238,1.43e-40,68;UBERON:0001893,4.89e-38,34;UBERON:0003528,5.40e-38,34;UBERON:0002020,5.40e-38,34;UBERON:0002791,2.37e-35,32;UBERON:0001869,2.65e-35,32;UBERON:0007023,5.19e-35,114;UBERON:0003075,4.71e-33,82;UBERON:0007284,4.71e-33,82;UBERON:0002390,2.12e-32,98;UBERON:0003061,2.12e-32,98;UBERON:0002346,1.17e-30,86;UBERON:0002193,1.50e-27,108;UBERON:0002619,1.33e-26,22;UBERON:0000956,1.60e-26,25;UBERON:0000203,1.60e-26,25;UBERON:0003056,2.70e-26,61;UBERON:0002371,2.93e-26,76;UBERON:0001950,5.64e-24,20;UBERON:0010371,3.31e-23,104;UBERON:0001474,3.45e-23,82;UBERON:0002405,1.82e-20,93;UBERON:0004765,9.25e-20,90;UBERON:0001434,2.30e-17,100;UBERON:0010314,5.43e-17,132;UBERON:0004121,4.93e-14,171;UBERON:0000924,4.93e-14,171;UBERON:0006601,4.93e-14,171;UBERON:0000125,6.32e-13,9;UBERON:0002308,6.32e-13,9;UBERON:0002420,7.65e-13,9;UBERON:0007245,7.65e-13,9;UBERON:0010009,7.65e-13,9;UBERON:0010011,7.65e-13,9;UBERON:0000454,7.65e-13,9;UBERON:0003076,4.17e-12,15;UBERON:0003057,4.17e-12,15;UBERON:0009663,2.39e-10,7;UBERON:0004732,7.86e-10,13;UBERON:0011216,2.37e-09,223;UBERON:0002298,3.18e-09,6;UBERON:0000200,6.83e-09,6;UBERON:0000923,8.42e-09,560;UBERON:0010316,8.42e-09,560;UBERON:0005291,8.42e-09,560;UBERON:0006598,8.42e-09,560;UBERON:0010317,8.42e-09,560;UBERON:0002532,8.42e-09,560;UBERON:0005423,1.02e-08,581;UBERON:0000178,1.25e-08,15;UBERON:0000179,1.25e-08,15;UBERON:0000463,1.25e-08,15;UBERON:0004733,1.41e-08,12;UBERON:0002028,1.41e-08,12;UBERON:0007277,1.41e-08,12;UBERON:0002050,1.69e-08,564;UBERON:0000349,5.60e-08,5;UBERON:0000922,6.54e-08,592;UBERON:0001872,1.11e-07,5;UBERON:0002021,1.36e-07,5;UBERON:0001871,2.01e-07,6;UBERON:0003081,2.02e-07,203;UBERON:0000479,2.69e-07,773 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,9.73202356245593,2.46373965131192,0.376627918784408,0,0,0,17.3080281813518,8.06041736004147,21.5194411409346,0,0,0,0,0,0.293600439334847,11.6339035791694,19.853900299544,6.07630438004385,1.11957737119962,1.6194683300949,0.515151135268373,84.185580253368,245.241487454037,187.274895236994,249.163927562894,364.294748787338,360.498215721901,32.7969327247252,110.149103807513,55.3368417939289,60.6752398096449,80.0401007643944,106.98692440953,68.8966962725933,171.930874536443,93.4849695291552,45.9125838556354,91.7857017437628,50.5076329381243,31.9955761181115,114.292675817195,70.7533085884272,96.0592579860613,197.450058192517,109.616715823221,68.5908856150909,147.058182994497,94.4771474467257,86.5721288765717,117.848843516021,85.1283822215979,24.9281237848091,26.3629331956654,7.54771123830153,47.4026823438209,59.319872672395,22.0194053775,35.9116057113973,54.9010029069489,15.1611247624646,0,0,0,1.28019066769952,0,0,0.661044872784862,0,0,0,0,0,2.80254281490768,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,1.20460095262218,0.895906278080929,3.74792179657038,1.4206635122641,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,55.8625756997744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,4.13552934676983,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,32.5241119004753,5.20559415430487,2.31986643833309,7.03568314404265,4.46557126157214,23.2192177423627,38.8909896965232,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.51132920165282,12.0799952458425,5.87001567918944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,1.8300481571743,0,0,0,19.0625871548286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,18.2638973506952,0,0,0,0,40.0883611293414,51.9953300856815,52.9771884071971,24.7761046476101,15.6317663772754,29.829772314865,24.3014146757152,16.6556287021797,0,3.84991942105343,0,0,0,0,0.797131363644112,0.199579371432817,0.191505370132367,0.846694330895531,0.324621940274555,15.1630476181268,45.6469358066384,6.11051593514791,5.01268954180134,5.0787533340481,1.1241165257259,6.25579092292247,13.6270796060904,25.0758901671708,10.1389452221791,9.39439653148147,6.50711652676443,49.2378000413142,0,0,0,0,0,0,0,0,0,0,0,0,0,222.689073099651,254.330304870207,0,0,0,0.996239941255349,0,0,0,0,0,0,0.716084698702437,0,0,9.57932369387759,0,425.537075535801,230.435955834039,183.644694161099,0,0,0.724999575434793,0.227586896570999,0,0.236387681767936,0,0,0,295.837622861822,146.404076491245,71.7134160690291,61.8138063015546,124.721095198397,139.529112589927,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,553.49810403732,5.61804353109152,406.448813333463,0,0.586993856796269,0,0,0,59.3781157563151,3.28570214068137,1.9542044523884,1.7626992537532,0.664653872707185,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0,0,0,0,0,0,0.677942222341597,0,0,213.484003963223,0.195551382734803,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,748.123679732398,247.524925036723,0,0,0,0.558564802544508,0,0,0,0,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,295.030214919251,279.080779122618,0.160753148465019,0,0.415440338029185,0.2249738915515,0,183.524410663893,0,2.44297692627514,0.472091293214983,0,0,0,1.42939065274673,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,423.143116171355,222.283003529462,0,0,0.854299300541557,0.78602152549833,0,0.496166021811951,0,0,0,0,0,0,0,0.785270481251171,170.125090553661,235.632717525691,176.268830434752,321.68255878213,150.530722935509,333.085105377581,0,0,0.454947352624943,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,218.724845992038,0,0,0,0,0,0,0,56.2265415488122,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,225.508809313669,222.463624831168,207.683650633354,241.011727982887,81.1670861833932,282.299904558937,213.793754816571,1273.50322871166,0,0.235939446695481,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,235.098332056632,285.093505994054,171.756727892484,244.277700866929,102.831264095425,0,0,0,0,18.74956425574,17.15046983316,0,0,0.266107110487916,0.115233987555779,0,217.367206059908,259.93400112038,0,0,0.078493092850514,123.021506904229,0,0,0,0,0.4288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| ||
|short_description=p1@OLIG1 | |||
}} | }} |
Latest revision as of 03:52, 18 September 2015
Short description: | p1@OLIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OLIG1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000333063, ENST00000382348, NM_138983, uc002yqz.2_5end |
EntrezGene: | OLIG1 |
HGNC: | 16983 |
UniProt: | Q8TAK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.03e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-44 | 42 |
defensive cell | 2.76e-42 | 48 |
phagocyte | 2.76e-42 | 48 |
myeloid leukocyte | 2.83e-39 | 72 |
monopoietic cell | 1.71e-38 | 59 |
monocyte | 1.71e-38 | 59 |
monoblast | 1.71e-38 | 59 |
promonocyte | 1.71e-38 | 59 |
macrophage dendritic cell progenitor | 1.08e-36 | 61 |
myeloid lineage restricted progenitor cell | 1.59e-35 | 66 |
myeloid cell | 3.96e-33 | 108 |
common myeloid progenitor | 3.96e-33 | 108 |
granulocyte monocyte progenitor cell | 6.06e-32 | 67 |
hematopoietic stem cell | 1.76e-19 | 168 |
hematopoietic oligopotent progenitor cell | 6.98e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.98e-19 | 161 |
leukocyte | 2.92e-18 | 136 |
nongranular leukocyte | 3.21e-18 | 115 |
hematopoietic cell | 2.06e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 7.55e-16 | 120 |
intermediate monocyte | 5.21e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.21e-09 | 9 |