FFCP PHASE1:Hg19::chr21:34442540..34442560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116448 | |EntrezGene=116448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16983 | |HGNC=16983 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAK6 | |UniProt=Q8TAK6 | ||
|association_with_transcript=90bp_to_ENST00000333063,ENST00000382348,NM_138983,uc002yqz.2_5end | |association_with_transcript=90bp_to_ENST00000333063,ENST00000382348,NM_138983,uc002yqz.2_5end | ||
|cluster_id=chr21:34442540..34442560,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_2_at_OLIG1_5end | |description=CAGE_peak_2_at_OLIG1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!6.76e-36!42;CL:0000860!2.14e-32!45;CL:0000766!3.06e-29!76;CL:0002194!1.24e-28!63;CL:0000576!1.24e-28!63;CL:0000040!1.24e-28!63;CL:0000559!1.24e-28!63;CL:0002009!3.35e-27!65;CL:0000839!2.41e-26!70;CL:0000763!3.49e-25!112;CL:0000049!3.49e-25!112;CL:0000557!2.04e-23!71;CL:0000037!1.32e-15!172;CL:0000566!1.32e-15!172;CL:0002032!3.05e-15!165;CL:0000837!3.05e-15!165;CL:0002087!7.25e-15!119;CL:0000738!1.94e-14!140;CL:0000988!1.75e-13!182;CL:0002031!8.81e-13!124;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9 | |ontology_enrichment_celltype=CL:0002057!6.76e-36!42;CL:0000860!2.14e-32!45;CL:0000766!3.06e-29!76;CL:0002194!1.24e-28!63;CL:0000576!1.24e-28!63;CL:0000040!1.24e-28!63;CL:0000559!1.24e-28!63;CL:0002009!3.35e-27!65;CL:0000839!2.41e-26!70;CL:0000763!3.49e-25!112;CL:0000049!3.49e-25!112;CL:0000557!2.04e-23!71;CL:0000037!1.32e-15!172;CL:0000566!1.32e-15!172;CL:0002032!3.05e-15!165;CL:0000837!3.05e-15!165;CL:0002087!7.25e-15!119;CL:0000738!1.94e-14!140;CL:0000988!1.75e-13!182;CL:0002031!8.81e-13!124;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-35;33!CL:0002057;3.90e-35;33!CL:0000576;1.03e-29;48!CL:0000473;4.70e-25;39!CL:0000234;4.70e-25;39!CL:0000766;1.36e-20;69!CL:0000763;7.81e-12;100!CL:0002393;1.63e-07;6!CL:0002397;1.63e-07;6!CL:0000094;8.61e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;3.90e-35;33!CL:0002057;3.90e-35;33!CL:0000576;1.03e-29;48!CL:0000473;4.70e-25;39!CL:0000234;4.70e-25;39!CL:0000766;1.36e-20;69!CL:0000763;7.81e-12;100!CL:0002393;1.63e-07;6!CL:0002397;1.63e-07;6!CL:0000094;8.61e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.86e-48,42;CL:0002057,1.86e-48,42;CL:0000473,1.36e-42,48;CL:0000234,1.36e-42,48;CL:0000766,1.23e-39,72;CL:0002194,4.60e-38,59;CL:0000576,4.60e-38,59;CL:0000040,4.60e-38,59;CL:0000559,4.60e-38,59;CL:0002009,2.41e-36,61;CL:0000839,5.15e-34,66;CL:0000763,6.12e-33,108;CL:0000049,6.12e-33,108;CL:0000557,8.30e-32,67;CL:0000037,2.05e-18,168;CL:0002032,1.24e-17,161;CL:0000837,1.24e-17,161;CL:0000738,1.66e-17,136;CL:0002087,6.98e-17,115;CL:0000988,1.50e-16,177;CL:0002031,5.52e-14,120;CL:0002393,3.63e-11,9;CL:0002397,3.63e-11,9;CL:0000094,7.54e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.85e-35;42!CL:0000049;1.93e-11;108!UBERON:0006601;5.16e-10;82 | |ontology_enrichment_development_v019=CL:0002057;9.85e-35;42!CL:0000049;1.93e-11;108!UBERON:0006601;5.16e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-45!57;UBERON:0005068!1.70e-45!57;UBERON:0006241!1.70e-45!57;UBERON:0007135!1.70e-45!57;UBERON:0001017!1.10e-39!82;UBERON:0002616!5.78e-37!59;UBERON:0007023!6.24e-37!115;UBERON:0005743!9.68e-37!86;UBERON:0002780!3.18e-36!41;UBERON:0001890!3.18e-36!41;UBERON:0006240!3.18e-36!41;UBERON:0000955!5.65e-36!69;UBERON:0006238!5.65e-36!69;UBERON:0003080!5.43e-35!42;UBERON:0002020!7.53e-34!34;UBERON:0003528!7.53e-34!34;UBERON:0001893!7.53e-34!34;UBERON:0002791!7.99e-33!33;UBERON:0000073!1.29e-32!94;UBERON:0001016!1.29e-32!94;UBERON:0001869!1.57e-31!32;UBERON:0003075!1.28e-27!86;UBERON:0007284!1.28e-27!86;UBERON:0002346!1.84e-25!90;UBERON:0002390!2.88e-24!102;UBERON:0003061!2.88e-24!102;UBERON:0000956!3.18e-24!25;UBERON:0000203!3.18e-24!25;UBERON:0002619!7.72e-23!22;UBERON:0003056!1.43e-21!61;UBERON:0001950!1.37e-20!20;UBERON:0002193!3.38e-20!112;UBERON:0002371!7.19e-19!80;UBERON:0001474!3.03e-17!86;UBERON:0000153!2.05e-15!129;UBERON:0007811!2.05e-15!129;UBERON:0000033!1.35e-14!123;UBERON:0004765!3.32e-13!101;UBERON:0001434!3.32e-13!101;UBERON:0004121!2.22e-11!169;UBERON:0003076!2.28e-11!15;UBERON:0003057!2.28e-11!15;UBERON:0002420!4.27e-11!9;UBERON:0007245!4.27e-11!9;UBERON:0010009!4.27e-11!9;UBERON:0010011!4.27e-11!9;UBERON:0000454!4.27e-11!9;UBERON:0002308!4.84e-11!9;UBERON:0000125!4.84e-11!9;UBERON:0000924!1.14e-10!173;UBERON:0006601!1.14e-10!173;UBERON:0002405!5.04e-10!115;UBERON:0004732!1.80e-09!13;UBERON:0009663!6.52e-09!7;UBERON:0004733!2.18e-08!12;UBERON:0002028!2.18e-08!12;UBERON:0007277!2.18e-08!12;UBERON:0000200!6.90e-08!6;UBERON:0002298!1.52e-07!8;UBERON:0001871!1.92e-07!7;UBERON:0000922!1.93e-07!612;UBERON:0000062!2.30e-07!511;UBERON:0000178!3.02e-07!15;UBERON:0000179!3.02e-07!15;UBERON:0000463!3.02e-07!15;UBERON:0000349!5.07e-07!5;UBERON:0002021!9.68e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.70e-45!57;UBERON:0005068!1.70e-45!57;UBERON:0006241!1.70e-45!57;UBERON:0007135!1.70e-45!57;UBERON:0001017!1.10e-39!82;UBERON:0002616!5.78e-37!59;UBERON:0007023!6.24e-37!115;UBERON:0005743!9.68e-37!86;UBERON:0002780!3.18e-36!41;UBERON:0001890!3.18e-36!41;UBERON:0006240!3.18e-36!41;UBERON:0000955!5.65e-36!69;UBERON:0006238!5.65e-36!69;UBERON:0003080!5.43e-35!42;UBERON:0002020!7.53e-34!34;UBERON:0003528!7.53e-34!34;UBERON:0001893!7.53e-34!34;UBERON:0002791!7.99e-33!33;UBERON:0000073!1.29e-32!94;UBERON:0001016!1.29e-32!94;UBERON:0001869!1.57e-31!32;UBERON:0003075!1.28e-27!86;UBERON:0007284!1.28e-27!86;UBERON:0002346!1.84e-25!90;UBERON:0002390!2.88e-24!102;UBERON:0003061!2.88e-24!102;UBERON:0000956!3.18e-24!25;UBERON:0000203!3.18e-24!25;UBERON:0002619!7.72e-23!22;UBERON:0003056!1.43e-21!61;UBERON:0001950!1.37e-20!20;UBERON:0002193!3.38e-20!112;UBERON:0002371!7.19e-19!80;UBERON:0001474!3.03e-17!86;UBERON:0000153!2.05e-15!129;UBERON:0007811!2.05e-15!129;UBERON:0000033!1.35e-14!123;UBERON:0004765!3.32e-13!101;UBERON:0001434!3.32e-13!101;UBERON:0004121!2.22e-11!169;UBERON:0003076!2.28e-11!15;UBERON:0003057!2.28e-11!15;UBERON:0002420!4.27e-11!9;UBERON:0007245!4.27e-11!9;UBERON:0010009!4.27e-11!9;UBERON:0010011!4.27e-11!9;UBERON:0000454!4.27e-11!9;UBERON:0002308!4.84e-11!9;UBERON:0000125!4.84e-11!9;UBERON:0000924!1.14e-10!173;UBERON:0006601!1.14e-10!173;UBERON:0002405!5.04e-10!115;UBERON:0004732!1.80e-09!13;UBERON:0009663!6.52e-09!7;UBERON:0004733!2.18e-08!12;UBERON:0002028!2.18e-08!12;UBERON:0007277!2.18e-08!12;UBERON:0000200!6.90e-08!6;UBERON:0002298!1.52e-07!8;UBERON:0001871!1.92e-07!7;UBERON:0000922!1.93e-07!612;UBERON:0000062!2.30e-07!511;UBERON:0000178!3.02e-07!15;UBERON:0000179!3.02e-07!15;UBERON:0000463!3.02e-07!15;UBERON:0000349!5.07e-07!5;UBERON:0002021!9.68e-07!5 | ||
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| ||
|short_description=p2@OLIG1 | |short_description=p2@OLIG1 | ||
}} | }} |
Latest revision as of 03:52, 18 September 2015
Short description: | p2@OLIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OLIG1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 90bp_to_ENST00000333063, ENST00000382348, NM_138983, uc002yqz.2_5end |
EntrezGene: | OLIG1 |
HGNC: | 16983 |
UniProt: | Q8TAK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.86e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-48 | 42 |
defensive cell | 1.36e-42 | 48 |
phagocyte | 1.36e-42 | 48 |
myeloid leukocyte | 1.23e-39 | 72 |
monopoietic cell | 4.60e-38 | 59 |
monocyte | 4.60e-38 | 59 |
monoblast | 4.60e-38 | 59 |
promonocyte | 4.60e-38 | 59 |
macrophage dendritic cell progenitor | 2.41e-36 | 61 |
myeloid lineage restricted progenitor cell | 5.15e-34 | 66 |
myeloid cell | 6.12e-33 | 108 |
common myeloid progenitor | 6.12e-33 | 108 |
granulocyte monocyte progenitor cell | 8.30e-32 | 67 |
hematopoietic stem cell | 2.05e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.24e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-17 | 161 |
leukocyte | 1.66e-17 | 136 |
nongranular leukocyte | 6.98e-17 | 115 |
hematopoietic cell | 1.50e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 5.52e-14 | 120 |
intermediate monocyte | 3.63e-11 | 9 |
CD14-positive, CD16-positive monocyte | 3.63e-11 | 9 |
granulocyte | 7.54e-07 | 8 |