FFCP PHASE1:Hg19::chr9:91793725..91793743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53358 | |EntrezGene=53358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18181 | |HGNC=18181 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7I8,Q92529 | |UniProt=Q5T7I8,Q92529 | ||
|association_with_transcript=-43bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | |association_with_transcript=-43bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | ||
|cluster_id=chr9:91793725..91793743,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SHC3_5end | |description=CAGE_peak_1_at_SHC3_5end | ||
|id=chr9:91793725..91793743,- | |id=chr9:91793725..91793743,- | ||
|ontology_enrichment_celltype=CL:0000192!6.73e-20!42;CL:0000514!6.73e-20!42;CL:0000393!1.43e-19!60;CL:0000211!1.43e-19!60;CL:0000183!8.85e-19!59;CL:0000055!3.25e-18!180;CL:0000187!6.22e-18!54;CL:0000359!4.34e-16!32;CL:0000680!6.94e-16!57;CL:0000056!6.94e-16!57;CL:0000355!6.94e-16!57;CL:0000222!7.88e-08!119;CL:0002539!2.86e-07!10 | |ontology_enrichment_celltype=CL:0000192!6.73e-20!42;CL:0000514!6.73e-20!42;CL:0000393!1.43e-19!60;CL:0000211!1.43e-19!60;CL:0000183!8.85e-19!59;CL:0000055!3.25e-18!180;CL:0000187!6.22e-18!54;CL:0000359!4.34e-16!32;CL:0000680!6.94e-16!57;CL:0000056!6.94e-16!57;CL:0000355!6.94e-16!57;CL:0000222!7.88e-08!119;CL:0002539!2.86e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.79e-18;32!CL:0000192;2.67e-16;43!CL:0002539;1.17e-09;10!CL:0000393;3.36e-09;61!CL:0000211;3.36e-09;61!CL:0000187;5.69e-09;55!CL:0002494;4.17e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.26e-22,43;CL:0000514,1.26e-22,43;CL:0000393,2.44e-19,61;CL:0000211,2.44e-19,61;CL:0000359,3.71e-19,32;CL:0000187,7.55e-17,55;CL:0000680,2.64e-15,58;CL:0000056,2.64e-15,58;CL:0000355,2.64e-15,58;CL:0002539,1.19e-09,10;CL:0000222,2.61e-07,121;CL:0002494,3.36e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.67e-16;43!CL:0000355;7.68e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!2.31e-30!194;UBERON:0005743!8.83e-27!86;UBERON:0000073!1.46e-26!94;UBERON:0001016!1.46e-26!94;UBERON:0000119!2.20e-26!312;UBERON:0000475!4.66e-26!365;UBERON:0000483!9.54e-26!309;UBERON:0001017!1.23e-25!82;UBERON:0004111!1.75e-25!241;UBERON:0000477!1.51e-23!286;UBERON:0002616!5.25e-23!59;UBERON:0003075!2.54e-22!86;UBERON:0007284!2.54e-22!86;UBERON:0001049!2.72e-22!57;UBERON:0005068!2.72e-22!57;UBERON:0006241!2.72e-22!57;UBERON:0007135!2.72e-22!57;UBERON:0000033!4.98e-22!123;UBERON:0001869!6.04e-22!32;UBERON:0001893!6.70e-22!34;UBERON:0002020!1.00e-21!34;UBERON:0003528!1.00e-21!34;UBERON:0000955!2.16e-21!69;UBERON:0006238!2.16e-21!69;UBERON:0003056!2.73e-21!61;UBERON:0002791!4.07e-21!33;UBERON:0000481!9.38e-21!347;UBERON:0002346!1.60e-20!90;UBERON:0000153!2.99e-20!129;UBERON:0007811!2.99e-20!129;UBERON:0003080!1.59e-19!42;UBERON:0002780!1.98e-19!41;UBERON:0001890!1.98e-19!41;UBERON:0006240!1.98e-19!41;UBERON:0000956!1.89e-17!25;UBERON:0000203!1.89e-17!25;UBERON:0001637!2.44e-17!42;UBERON:0003509!2.44e-17!42;UBERON:0004572!2.44e-17!42;UBERON:0004121!1.28e-16!169;UBERON:0002619!1.52e-16!22;UBERON:0000924!1.04e-15!173;UBERON:0006601!1.04e-15!173;UBERON:0000468!1.76e-15!659;UBERON:0001950!5.15e-15!20;UBERON:0000922!8.64e-15!612;UBERON:0001134!1.57e-13!61;UBERON:0002036!1.57e-13!61;UBERON:0003082!1.57e-13!61;UBERON:0002050!1.96e-13!605;UBERON:0005423!1.96e-13!605;UBERON:0000923!2.78e-13!604;UBERON:0005291!2.78e-13!604;UBERON:0006598!2.78e-13!604;UBERON:0002532!2.78e-13!604;UBERON:0004573!2.91e-13!33;UBERON:0004571!2.91e-13!33;UBERON:0002385!4.27e-13!63;UBERON:0001015!4.27e-13!63;UBERON:0000383!4.27e-13!63;UBERON:0003914!5.58e-13!118;UBERON:0004290!2.72e-12!70;UBERON:0000467!3.29e-12!625;UBERON:0000480!4.82e-12!626;UBERON:0000914!9.15e-12!83;UBERON:0002329!9.15e-12!83;UBERON:0003077!9.15e-12!83;UBERON:0003059!9.15e-12!83;UBERON:0007282!9.15e-12!83;UBERON:0009618!9.15e-12!83;UBERON:0007285!9.15e-12!83;UBERON:0004872!2.54e-11!84;UBERON:0001981!2.55e-11!60;UBERON:0007500!2.55e-11!60;UBERON:0004537!2.55e-11!60;UBERON:0006965!2.55e-11!60;UBERON:0002049!3.61e-11!79;UBERON:0007798!3.61e-11!79;UBERON:0000064!1.18e-10!219;UBERON:0000486!5.23e-10!82;UBERON:0005256!6.71e-10!143;UBERON:0004535!4.59e-09!110;UBERON:0000947!1.89e-08!21;UBERON:0010191!1.89e-08!21;UBERON:0001009!2.93e-08!113;UBERON:0000055!3.85e-08!69;UBERON:0007023!3.95e-08!115;UBERON:0002100!1.51e-07!216;UBERON:0000490!2.60e-07!138;UBERON:0001135!2.81e-07!15;UBERON:0004237!2.86e-07!10;UBERON:0004695!2.86e-07!10;UBERON:0002111!2.86e-07!10;UBERON:0004178!2.86e-07!10 | |ontology_enrichment_uberon=UBERON:0000025!2.31e-30!194;UBERON:0005743!8.83e-27!86;UBERON:0000073!1.46e-26!94;UBERON:0001016!1.46e-26!94;UBERON:0000119!2.20e-26!312;UBERON:0000475!4.66e-26!365;UBERON:0000483!9.54e-26!309;UBERON:0001017!1.23e-25!82;UBERON:0004111!1.75e-25!241;UBERON:0000477!1.51e-23!286;UBERON:0002616!5.25e-23!59;UBERON:0003075!2.54e-22!86;UBERON:0007284!2.54e-22!86;UBERON:0001049!2.72e-22!57;UBERON:0005068!2.72e-22!57;UBERON:0006241!2.72e-22!57;UBERON:0007135!2.72e-22!57;UBERON:0000033!4.98e-22!123;UBERON:0001869!6.04e-22!32;UBERON:0001893!6.70e-22!34;UBERON:0002020!1.00e-21!34;UBERON:0003528!1.00e-21!34;UBERON:0000955!2.16e-21!69;UBERON:0006238!2.16e-21!69;UBERON:0003056!2.73e-21!61;UBERON:0002791!4.07e-21!33;UBERON:0000481!9.38e-21!347;UBERON:0002346!1.60e-20!90;UBERON:0000153!2.99e-20!129;UBERON:0007811!2.99e-20!129;UBERON:0003080!1.59e-19!42;UBERON:0002780!1.98e-19!41;UBERON:0001890!1.98e-19!41;UBERON:0006240!1.98e-19!41;UBERON:0000956!1.89e-17!25;UBERON:0000203!1.89e-17!25;UBERON:0001637!2.44e-17!42;UBERON:0003509!2.44e-17!42;UBERON:0004572!2.44e-17!42;UBERON:0004121!1.28e-16!169;UBERON:0002619!1.52e-16!22;UBERON:0000924!1.04e-15!173;UBERON:0006601!1.04e-15!173;UBERON:0000468!1.76e-15!659;UBERON:0001950!5.15e-15!20;UBERON:0000922!8.64e-15!612;UBERON:0001134!1.57e-13!61;UBERON:0002036!1.57e-13!61;UBERON:0003082!1.57e-13!61;UBERON:0002050!1.96e-13!605;UBERON:0005423!1.96e-13!605;UBERON:0000923!2.78e-13!604;UBERON:0005291!2.78e-13!604;UBERON:0006598!2.78e-13!604;UBERON:0002532!2.78e-13!604;UBERON:0004573!2.91e-13!33;UBERON:0004571!2.91e-13!33;UBERON:0002385!4.27e-13!63;UBERON:0001015!4.27e-13!63;UBERON:0000383!4.27e-13!63;UBERON:0003914!5.58e-13!118;UBERON:0004290!2.72e-12!70;UBERON:0000467!3.29e-12!625;UBERON:0000480!4.82e-12!626;UBERON:0000914!9.15e-12!83;UBERON:0002329!9.15e-12!83;UBERON:0003077!9.15e-12!83;UBERON:0003059!9.15e-12!83;UBERON:0007282!9.15e-12!83;UBERON:0009618!9.15e-12!83;UBERON:0007285!9.15e-12!83;UBERON:0004872!2.54e-11!84;UBERON:0001981!2.55e-11!60;UBERON:0007500!2.55e-11!60;UBERON:0004537!2.55e-11!60;UBERON:0006965!2.55e-11!60;UBERON:0002049!3.61e-11!79;UBERON:0007798!3.61e-11!79;UBERON:0000064!1.18e-10!219;UBERON:0000486!5.23e-10!82;UBERON:0005256!6.71e-10!143;UBERON:0004535!4.59e-09!110;UBERON:0000947!1.89e-08!21;UBERON:0010191!1.89e-08!21;UBERON:0001009!2.93e-08!113;UBERON:0000055!3.85e-08!69;UBERON:0007023!3.95e-08!115;UBERON:0002100!1.51e-07!216;UBERON:0000490!2.60e-07!138;UBERON:0001135!2.81e-07!15;UBERON:0004237!2.86e-07!10;UBERON:0004695!2.86e-07!10;UBERON:0002111!2.86e-07!10;UBERON:0004178!2.86e-07!10 | ||
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| ||
|short_description=p1@SHC3 | |short_description=p1@SHC3 | ||
}} | }} |
Latest revision as of 04:31, 18 September 2015
Short description: | p1@SHC3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -43bp_to_ENST00000375830, ENST00000375835, NM_016848, uc004aqg.2_5end |
EntrezGene: | SHC3 |
HGNC: | 18181 |
UniProt: | Q5T7I8Q92529 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.26e-22 | 43 |
smooth muscle myoblast | 1.26e-22 | 43 |
electrically responsive cell | 2.44e-19 | 61 |
electrically active cell | 2.44e-19 | 61 |
vascular associated smooth muscle cell | 3.71e-19 | 32 |
muscle cell | 7.55e-17 | 55 |
muscle precursor cell | 2.64e-15 | 58 |
myoblast | 2.64e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.64e-15 | 58 |
aortic smooth muscle cell | 1.19e-09 | 10 |
mesodermal cell | 2.61e-07 | 121 |
cardiocyte | 3.36e-07 | 16 |
Ontology term | p-value | n |
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