FFCP PHASE1:Hg19::chr4:66536169..66536189,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:66536169..66536189,-
|short_description=p1@EPHA5
|description=CAGE_peak_1_at_EPHA5_5end
|association_with_transcript=23bp_to_ENST00000511294_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2044 | |EntrezGene=2044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3389 | |HGNC=3389 | ||
|TSSclassifier=strong | |||
|UniProt=F8VP57 | |UniProt=F8VP57 | ||
|association_with_transcript=23bp_to_ENST00000511294_5end | |||
|cluster_id=chr4:66536169..66536189,- | |||
|coexpression_cluster_id=C1943 | |||
|description=CAGE_peak_1_at_EPHA5_5end | |||
|id=chr4:66536169..66536189,- | |||
|ontology_enrichment_celltype=CL:0000055!3.66e-17!180;CL:0000359!1.78e-11!32;CL:0000192!3.89e-11!42;CL:0000514!3.89e-11!42;CL:0000133!6.01e-10!59;CL:0000393!1.87e-09!60;CL:0000211!1.87e-09!60;CL:0000680!2.55e-08!57;CL:0000056!2.55e-08!57;CL:0000355!2.55e-08!57;CL:0000333!3.47e-08!41;CL:0000183!4.37e-08!59;CL:0000187!5.35e-08!54;CL:0002319!5.12e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.88e-12;32!CL:0000192;5.62e-09;43!CL:0002539;1.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.98e-13,32;CL:0000192,2.35e-11,43;CL:0000514,2.35e-11,43;CL:0000393,1.69e-08,61;CL:0000211,1.69e-08,61;CL:0000187,8.36e-08,55;CL:0002539,1.44e-07,10;CL:0000133,1.56e-07,59;CL:0000680,2.10e-07,58;CL:0000056,2.10e-07,58;CL:0000355,2.10e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;5.62e-09;43!UBERON:0006601;6.15e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;7.91e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,8.06e-07,20 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.55e-22;32!UBERON:0003528;3.20e-22;34!UBERON:0002020;3.20e-22;34!UBERON:0002791;5.02e-22;32!UBERON:0001893;6.28e-22;34!UBERON:0002780;2.04e-21;41!UBERON:0001890;2.04e-21;41!UBERON:0000956;4.66e-21;25!UBERON:0000203;4.66e-21;25!UBERON:0000073;1.41e-20;53!UBERON:0002616;1.41e-20;53!UBERON:0002619;2.96e-20;22!UBERON:0001950;1.69e-18;20!UBERON:0000955;2.86e-15;68!UBERON:0001017;1.92e-14;75!UBERON:0001016;1.04e-12;83!UBERON:0004573;1.44e-10;33!UBERON:0004571;1.44e-10;33!UBERON:0001637;1.62e-08;42!UBERON:0003509;1.62e-08;42!UBERON:0004572;1.62e-08;42!UBERON:0004733;3.50e-08;12!UBERON:0002028;3.50e-08;12!UBERON:0004237;1.54e-07;10!UBERON:0004695;1.54e-07;10!UBERON:0002111;1.54e-07;10!UBERON:0004178;1.54e-07;10!UBERON:0004732;2.87e-07;13!UBERON:0001871;6.26e-07;6 | |||
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| ||
|short_description=p1@EPHA5 | |||
}} | }} |
Latest revision as of 06:09, 18 September 2015
Short description: | p1@EPHA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPHA5_5end |
Coexpression cluster: | C1943_extraskeletal_temporal_occipital_adrenal_parietal_duodenum_bone |
Association with transcript: | 23bp_to_ENST00000511294_5end |
EntrezGene: | EPHA5 |
HGNC: | 3389 |
UniProt: | F8VP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.98e-13 | 32 |
smooth muscle cell | 2.35e-11 | 43 |
smooth muscle myoblast | 2.35e-11 | 43 |
electrically responsive cell | 1.69e-08 | 61 |
electrically active cell | 1.69e-08 | 61 |
muscle cell | 8.36e-08 | 55 |
aortic smooth muscle cell | 1.44e-07 | 10 |
neurectodermal cell | 1.56e-07 | 59 |
muscle precursor cell | 2.10e-07 | 58 |
myoblast | 2.10e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.10e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 8.06e-07 | 20 |