FFCP PHASE1:Hg19::chr3:50310568..50310595,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7869 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10724 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000418576,ENST00000434030,ENST00000456210,uc003cyy.2,uc011bdo.1_5end | |||
|cluster_id=chr3:50310568..50310595,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_SEMA3B_5end | |||
|id=chr3:50310568..50310595,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.07e-19;82!UBERON:0006241;5.50e-11;3!UBERON:0003057;5.50e-11;3!UBERON:0010122;1.20e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.25e-43!115;UBERON:0001049!5.10e-40!57;UBERON:0005068!5.10e-40!57;UBERON:0006241!5.10e-40!57;UBERON:0007135!5.10e-40!57;UBERON:0001017!4.13e-33!82;UBERON:0002616!3.57e-32!59;UBERON:0000955!6.01e-32!69;UBERON:0006238!6.01e-32!69;UBERON:0005743!6.48e-32!86;UBERON:0003080!8.51e-32!42;UBERON:0000073!3.98e-31!94;UBERON:0001016!3.98e-31!94;UBERON:0002780!5.56e-31!41;UBERON:0001890!5.56e-31!41;UBERON:0006240!5.56e-31!41;UBERON:0003075!8.07e-31!86;UBERON:0007284!8.07e-31!86;UBERON:0002346!2.06e-28!90;UBERON:0002020!1.82e-26!34;UBERON:0003528!1.82e-26!34;UBERON:0001893!1.97e-26!34;UBERON:0002791!1.73e-25!33;UBERON:0001869!2.90e-24!32;UBERON:0003056!1.11e-22!61;UBERON:0000153!1.83e-19!129;UBERON:0007811!1.83e-19!129;UBERON:0000033!4.85e-19!123;UBERON:0002619!1.58e-17!22;UBERON:0000956!2.03e-17!25;UBERON:0000203!2.03e-17!25;UBERON:0004121!1.20e-16!169;UBERON:0000924!1.10e-15!173;UBERON:0006601!1.10e-15!173;UBERON:0001950!1.81e-15!20;UBERON:0002308!7.89e-11!9;UBERON:0000125!7.89e-11!9;UBERON:0002420!8.33e-11!9;UBERON:0007245!8.33e-11!9;UBERON:0010009!8.33e-11!9;UBERON:0010011!8.33e-11!9;UBERON:0000454!8.33e-11!9;UBERON:0000025!6.56e-10!194;UBERON:0002298!1.03e-09!8;UBERON:0003076!2.63e-09!15;UBERON:0003057!2.63e-09!15;UBERON:0004111!7.08e-09!241;UBERON:0009663!9.42e-09!7;UBERON:0000475!2.94e-08!365;UBERON:0000062!1.32e-07!511;UBERON:0000200!1.38e-07!6;UBERON:0004732!1.40e-07!13;UBERON:0000477!7.08e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.88e-60;34!UBERON:0003528;5.87e-59;34!UBERON:0002020;5.87e-59;34!UBERON:0002791;2.38e-57;32!UBERON:0001869;5.62e-57;32!UBERON:0002780;3.94e-54;41!UBERON:0001890;3.94e-54;41!UBERON:0000073;6.82e-52;53!UBERON:0002616;6.82e-52;53!UBERON:0002619;1.94e-49;22!UBERON:0000956;3.83e-43;25!UBERON:0000203;3.83e-43;25!UBERON:0001950;5.23e-43;20!UBERON:0000955;4.29e-34;68!UBERON:0001017;5.32e-34;75!UBERON:0000125;3.08e-30;9!UBERON:0002308;3.08e-30;9!UBERON:0002420;4.05e-30;9!UBERON:0007245;4.05e-30;9!UBERON:0010009;4.05e-30;9!UBERON:0010011;4.05e-30;9!UBERON:0000454;4.05e-30;9!UBERON:0001016;6.72e-26;83!UBERON:0009663;8.13e-24;7!UBERON:0002298;5.76e-21;6!UBERON:0000200;4.26e-20;6!UBERON:0004732;4.89e-20;13!UBERON:0007023;8.60e-20;114!UBERON:0000349;1.65e-17;5!UBERON:0004733;4.77e-17;12!UBERON:0002028;4.77e-17;12!UBERON:0000369;1.29e-13;4!UBERON:0002435;1.29e-13;4!UBERON:0000204;1.29e-13;4!UBERON:0001871;2.55e-12;6!UBERON:0001896;1.83e-11;3!UBERON:0005290;1.83e-11;3!UBERON:0002021;3.07e-11;5!UBERON:0000988;3.08e-11;3!UBERON:0001870;3.41e-11;3!UBERON:0002240;5.50e-11;3!UBERON:0005174;5.50e-11;3!UBERON:0001137;5.50e-11;3!UBERON:0001872;5.64e-11;5!UBERON:0005383;9.27e-11;3!UBERON:0005382;9.27e-11;3!UBERON:0011216;9.73e-11;132!UBERON:0002680;4.60e-09;9!UBERON:0001895;4.60e-09;9!UBERON:0005162;1.29e-08;2!UBERON:0000122;1.29e-08;2!UBERON:0010314;1.39e-08;132!UBERON:0001875;1.41e-08;2!UBERON:0006514;1.41e-08;2!UBERON:0001897;1.82e-08;2!UBERON:0010225;1.82e-08;2!UBERON:0002784;1.92e-08;4!UBERON:0001954;2.37e-08;2!UBERON:0003022;2.37e-08;2!UBERON:0002421;2.37e-08;2!UBERON:0002600;2.37e-08;2!UBERON:0002702;3.20e-08;2!UBERON:0001894;3.93e-08;7!UBERON:0002148;3.95e-08;2!UBERON:0006331;3.95e-08;2!UBERON:0009662;3.95e-08;2!UBERON:0001876;5.22e-08;2!UBERON:0002771;9.18e-08;2!UBERON:0001873;1.20e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.05e-102,56;UBERON:0005068,2.05e-102,56;UBERON:0006241,2.05e-102,56;UBERON:0007135,2.05e-102,56;UBERON:0000073,3.51e-93,53;UBERON:0002616,3.51e-93,53;UBERON:0001017,1.06e-77,81;UBERON:0000955,1.76e-77,68;UBERON:0006238,1.76e-77,68;UBERON:0002780,1.39e-76,41;UBERON:0001890,1.39e-76,41;UBERON:0003080,1.39e-76,41;UBERON:0006240,1.39e-76,41;UBERON:0001016,1.32e-72,89;UBERON:0003075,1.07e-70,82;UBERON:0007284,1.07e-70,82;UBERON:0003528,1.18e-70,34;UBERON:0002020,1.18e-70,34;UBERON:0001893,1.51e-70,34;UBERON:0002346,5.97e-67,86;UBERON:0002791,2.56e-64,32;UBERON:0001869,6.35e-64,32;UBERON:0007023,1.72e-61,114;UBERON:0010371,1.29e-53,104;UBERON:0003056,9.93e-53,61;UBERON:0002619,2.08e-49,22;UBERON:0010314,1.76e-46,132;UBERON:0000956,4.08e-43,25;UBERON:0000203,4.08e-43,25;UBERON:0001950,5.10e-43,20;UBERON:0004121,9.69e-35,171;UBERON:0000924,9.69e-35,171;UBERON:0006601,9.69e-35,171;UBERON:0000125,3.31e-30,9;UBERON:0002308,3.31e-30,9;UBERON:0002420,3.92e-30,9;UBERON:0007245,3.92e-30,9;UBERON:0010009,3.92e-30,9;UBERON:0010011,3.92e-30,9;UBERON:0000454,3.92e-30,9;UBERON:0000025,1.91e-25,192;UBERON:0003076,1.95e-25,15;UBERON:0003057,1.95e-25,15;UBERON:0011216,2.51e-25,223;UBERON:0009663,9.02e-24,7;UBERON:0002298,5.03e-21,6;UBERON:0004111,1.99e-20,240;UBERON:0000200,3.61e-20,6;UBERON:0004732,4.17e-20,13;UBERON:0000349,1.60e-17,5;UBERON:0004733,4.10e-17,12;UBERON:0002028,4.10e-17,12;UBERON:0007277,4.10e-17,12;UBERON:0000369,1.42e-13,4;UBERON:0002435,1.42e-13,4;UBERON:0000204,1.42e-13,4;UBERON:0010082,1.42e-13,4;UBERON:0000483,6.25e-13,306;UBERON:0000119,1.06e-12,309;UBERON:0001871,2.29e-12,6;UBERON:0001896,1.77e-11,3;UBERON:0005290,1.77e-11,3;UBERON:0010096,1.77e-11,3;UBERON:0000988,2.78e-11,3;UBERON:0002021,3.60e-11,5;UBERON:0001870,4.19e-11,3;UBERON:0001872,4.34e-11,5;UBERON:0002240,6.51e-11,3;UBERON:0005174,6.51e-11,3;UBERON:0001137,6.51e-11,3;UBERON:0005383,1.04e-10,3;UBERON:0005382,1.04e-10,3;UBERON:0002680,4.14e-09,9;UBERON:0001895,4.14e-09,9;UBERON:0010092,4.14e-09,9;UBERON:0005162,1.27e-08,2;UBERON:0000122,1.27e-08,2;UBERON:0001875,1.41e-08,2;UBERON:0006514,1.41e-08,2;UBERON:0002784,1.81e-08,4;UBERON:0001897,1.82e-08,2;UBERON:0010225,1.82e-08,2;UBERON:0001954,2.69e-08,2;UBERON:0003022,2.69e-08,2;UBERON:0002421,2.69e-08,2;UBERON:0002600,2.69e-08,2;UBERON:0002702,3.56e-08,2;UBERON:0001894,3.68e-08,7;UBERON:0006222,3.68e-08,7;UBERON:0002148,3.82e-08,2;UBERON:0006331,3.82e-08,2;UBERON:0009662,3.82e-08,2;UBERON:0001876,4.54e-08,2;UBERON:0002771,8.43e-08,2;UBERON:0001873,1.18e-07,2;UBERON:0010122,1.18e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.422510572623884,0,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,2.43317435151318,0,0,0.175669571386252,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.243947412259191,0.132529768321485,0.929551542956147,1.24393266018445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0.414656231081544,0.288239906833923,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,1.12284324244932,1.61158997199083,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,5.96488588659779,6.47079315488359,0.111308705022906,0,1.47787785689595,0,0,0.503865495708552,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,7.75466196876175,4.91670920257812,0,0.260427761085233,0,0.724999575434793,0,0,0,0.344743373241465,0,0,5.31444831488303,3.73848959738765,0,1.87984741883082,1.18219047581419,2.85201016300164,0,0,0.769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0.451191321234361,0.19606253431774,0.671286347903371,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,11.1885880747924,0.802577647298789,5.62234669740814,0,0,0,1.97292201424695,0,0,0.505492637027904,0,0,0,0,0,0,0,0.416024019039416,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0.176512253383001,0.677942222341597,0,0,4.30513412499975,0,0,0,0,0.144090417154106,0.229073192331831,3.08870996151536,0,0,0,0,0,0,0.288950589901519,10.2071449080664,12.8691056158473,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,11.1332156573302,6.1291532750209,0.321506296930038,0.275078873194468,0,0,0,3.15897694621728,0.335434687599266,0.157611414598396,0.367182116944987,0,0,0,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,6.20558190535443,6.47939748539181,0,0,0.640724475406168,0.157204305099666,0.828478110694391,0,0.592834895693833,0,0,1.08803560673895,0.7520696820681,0.612691153526923,0,0.628216385000937,6.2024772597689,3.29470915235301,7.01069211956399,7.45431954397093,5.43552352530576,8.32091799414538,0.415045904808692,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49814649913135,0,0.132864840313363,0,0,0,0,0.19998739585493,0.533458648470704,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,3.53260738030527,7.08482881627925,4.31011419454308,4.30744364905586,0.756215088665154,5.18679393481634,4.68279372332368,28.5538840518309,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,3.64702956939331,4.68646859168308,5.99391709853434,4.43910671357348,0,0.548257766857182,0,0,0,1.60710550763486,0.672567444437648,0,0.682986574053893,0.443511850813194,0,0.171488009437418,5.64148783707703,4.93295801721368,0.827356886187777,0,0.313972371402056,5.18481446722806,0,0,0,0,0.929195074296532,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0.846774100381858,0,0,0,0,0.196300467230486,0,0.647428837187895,0.513314034281235,0,0.485710993059139,0,0.795803100645473,0.237840181555137,0.11294608203896,0.219881033490858,0.301925687133347,0.308696632431779,0,0,0.245148321753905,0,6.28187094767825,5.34683520588755,4.226557275834,0.169927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| |||
|short_description=p4@SEMA3B | |||
}} |
Latest revision as of 19:22, 18 September 2015
Short description: | p4@SEMA3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA3B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000418576, ENST00000434030, ENST00000456210, uc003cyy.2, uc011bdo.1_5end |
EntrezGene: | SEMA3B |
HGNC: | 10724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data