FFCP PHASE1:Hg19::chr8:68864580..68864596,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22950 | |||
|TSSclassifier=strong | |||
|UniProt=Q70Z35 | |||
|association_with_transcript=-6bp_to_ENST00000529398,NM_024870,NM_025170,uc003xxu.1,uc003xxv.1,uc011lez.1_5end | |||
|cluster_id=chr8:68864580..68864596,+ | |||
|coexpression_cluster_id=C1544 | |||
|description=CAGE_peak_5_at_PREX2_5end | |||
|id=chr8:68864580..68864596,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.87e-08!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.79e-14;82!UBERON:0006241;1.13e-09;3!UBERON:0003057;1.13e-09;3!UBERON:0010122;7.45e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.85e-55!115;UBERON:0001049!3.60e-47!57;UBERON:0005068!3.60e-47!57;UBERON:0006241!3.60e-47!57;UBERON:0007135!3.60e-47!57;UBERON:0001017!8.40e-44!82;UBERON:0005743!4.38e-42!86;UBERON:0000073!8.47e-39!94;UBERON:0001016!8.47e-39!94;UBERON:0002616!2.49e-38!59;UBERON:0002780!1.84e-37!41;UBERON:0001890!1.84e-37!41;UBERON:0006240!1.84e-37!41;UBERON:0003080!3.06e-36!42;UBERON:0000955!6.70e-36!69;UBERON:0006238!6.70e-36!69;UBERON:0003075!5.94e-33!86;UBERON:0007284!5.94e-33!86;UBERON:0002020!1.23e-32!34;UBERON:0003528!1.23e-32!34;UBERON:0001893!2.31e-32!34;UBERON:0002791!2.22e-31!33;UBERON:0002346!1.34e-30!90;UBERON:0001869!7.36e-30!32;UBERON:0003056!6.01e-23!61;UBERON:0000956!1.86e-21!25;UBERON:0000203!1.86e-21!25;UBERON:0002619!4.53e-19!22;UBERON:0004121!6.06e-18!169;UBERON:0000025!3.53e-17!194;UBERON:0000033!3.58e-17!123;UBERON:0000924!4.94e-17!173;UBERON:0006601!4.94e-17!173;UBERON:0001950!7.27e-17!20;UBERON:0000153!1.94e-16!129;UBERON:0007811!1.94e-16!129;UBERON:0004111!3.00e-16!241;UBERON:0002308!5.87e-13!9;UBERON:0000125!5.87e-13!9;UBERON:0002420!8.50e-13!9;UBERON:0007245!8.50e-13!9;UBERON:0010009!8.50e-13!9;UBERON:0010011!8.50e-13!9;UBERON:0000454!8.50e-13!9;UBERON:0000477!1.25e-12!286;UBERON:0003076!9.25e-12!15;UBERON:0003057!9.25e-12!15;UBERON:0009663!1.76e-10!7;UBERON:0000483!2.09e-09!309;UBERON:0004732!2.12e-09!13;UBERON:0000119!4.30e-09!312;UBERON:0002298!1.00e-08!8;UBERON:0004733!1.92e-08!12;UBERON:0002028!1.92e-08!12;UBERON:0007277!1.92e-08!12;UBERON:0000468!2.23e-08!659;UBERON:0000200!6.05e-08!6;UBERON:0000922!8.52e-08!612;UBERON:0000349!2.00e-07!5;UBERON:0001871!2.15e-07!7;UBERON:0000064!7.19e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.38e-38;34!UBERON:0003528;3.38e-37;34!UBERON:0002020;3.38e-37;34!UBERON:0002791;4.35e-36;32!UBERON:0002780;6.54e-36;41!UBERON:0001890;6.54e-36;41!UBERON:0001869;6.93e-36;32!UBERON:0000073;1.21e-35;53!UBERON:0002616;1.21e-35;53!UBERON:0002619;1.48e-27;22!UBERON:0001017;3.39e-27;75!UBERON:0000125;6.92e-26;9!UBERON:0002308;6.92e-26;9!UBERON:0002420;2.69e-25;9!UBERON:0007245;2.69e-25;9!UBERON:0010009;2.69e-25;9!UBERON:0010011;2.69e-25;9!UBERON:0000454;2.69e-25;9!UBERON:0000956;6.95e-24;25!UBERON:0000203;6.95e-24;25!UBERON:0001950;4.26e-23;20!UBERON:0000955;4.23e-21;68!UBERON:0009663;1.02e-20;7!UBERON:0001016;2.52e-20;83!UBERON:0002298;2.85e-17;6!UBERON:0004732;2.02e-16;13!UBERON:0000200;6.58e-16;6!UBERON:0004733;2.49e-14;12!UBERON:0002028;2.49e-14;12!UBERON:0000349;5.32e-14;5!UBERON:0007023;1.04e-12;114!UBERON:0000369;2.02e-12;4!UBERON:0002435;2.02e-12;4!UBERON:0000204;2.02e-12;4!UBERON:0005383;1.02e-09;3!UBERON:0005382;1.02e-09;3!UBERON:0002240;1.13e-09;3!UBERON:0005174;1.13e-09;3!UBERON:0001137;1.13e-09;3!UBERON:0000988;1.41e-09;3!UBERON:0001896;2.13e-09;3!UBERON:0001870;2.13e-09;3!UBERON:0005290;2.13e-09;3!UBERON:0001871;2.36e-09;6!UBERON:0011216;2.75e-09;132!UBERON:0002680;6.50e-08;9!UBERON:0001895;6.50e-08;9!UBERON:0001875;2.66e-07;2!UBERON:0006514;2.66e-07;2!UBERON:0001897;2.83e-07;2!UBERON:0010225;2.83e-07;2!UBERON:0002784;2.89e-07;4!UBERON:0001894;5.42e-07;7!UBERON:0001873;7.45e-07;2!UBERON:0002148;7.45e-07;2!UBERON:0006331;7.45e-07;2!UBERON:0009662;7.45e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-71,56;UBERON:0005068,1.03e-71,56;UBERON:0006241,1.03e-71,56;UBERON:0007135,1.03e-71,56;UBERON:0001017,2.77e-65,81;UBERON:0000073,2.59e-64,53;UBERON:0002616,2.59e-64,53;UBERON:0001016,2.58e-60,89;UBERON:0000955,4.73e-53,68;UBERON:0006238,4.73e-53,68;UBERON:0003075,1.10e-50,82;UBERON:0007284,1.10e-50,82;UBERON:0002780,2.25e-50,41;UBERON:0001890,2.25e-50,41;UBERON:0003080,2.25e-50,41;UBERON:0006240,2.25e-50,41;UBERON:0002346,8.10e-48,86;UBERON:0003528,1.93e-45,34;UBERON:0002020,1.93e-45,34;UBERON:0001893,5.86e-45,34;UBERON:0007023,3.44e-42,114;UBERON:0002791,1.74e-40,32;UBERON:0001869,5.38e-40,32;UBERON:0010371,1.23e-37,104;UBERON:0003056,9.32e-34,61;UBERON:0010314,6.22e-29,132;UBERON:0002619,1.57e-27,22;UBERON:0004121,3.17e-27,171;UBERON:0000924,3.17e-27,171;UBERON:0006601,3.17e-27,171;UBERON:0000125,2.55e-26,9;UBERON:0002308,2.55e-26,9;UBERON:0002420,5.73e-26,9;UBERON:0007245,5.73e-26,9;UBERON:0010009,5.73e-26,9;UBERON:0010011,5.73e-26,9;UBERON:0000454,5.73e-26,9;UBERON:0011216,8.07e-25,223;UBERON:0000956,7.33e-24,25;UBERON:0000203,7.33e-24,25;UBERON:0001950,4.04e-23,20;UBERON:0003076,1.35e-21,15;UBERON:0003057,1.35e-21,15;UBERON:0009663,6.32e-21,7;UBERON:0000025,1.80e-18,192;UBERON:0002298,1.16e-17,6;UBERON:0004732,1.34e-16,13;UBERON:0004111,4.97e-16,240;UBERON:0000200,2.02e-15,6;UBERON:0004733,1.41e-14,12;UBERON:0002028,1.41e-14,12;UBERON:0007277,1.41e-14,12;UBERON:0000349,2.68e-14,5;UBERON:0000369,1.47e-12,4;UBERON:0002435,1.47e-12,4;UBERON:0000204,1.47e-12,4;UBERON:0010082,1.47e-12,4;UBERON:0005383,6.14e-10,3;UBERON:0005382,6.14e-10,3;UBERON:0000988,6.51e-10,3;UBERON:0001871,1.38e-09,6;UBERON:0002240,1.79e-09,3;UBERON:0005174,1.79e-09,3;UBERON:0001137,1.79e-09,3;UBERON:0001896,1.84e-09,3;UBERON:0005290,1.84e-09,3;UBERON:0010096,1.84e-09,3;UBERON:0000483,2.23e-09,306;UBERON:0001870,3.43e-09,3;UBERON:0000119,3.53e-09,309;UBERON:0002680,4.39e-08,9;UBERON:0001895,4.39e-08,9;UBERON:0010092,4.39e-08,9;UBERON:0001897,2.42e-07,2;UBERON:0010225,2.42e-07,2;UBERON:0001875,2.57e-07,2;UBERON:0006514,2.57e-07,2;UBERON:0002784,3.31e-07,4;UBERON:0001873,4.39e-07,2;UBERON:0002148,4.39e-07,2;UBERON:0006331,4.39e-07,2;UBERON:0009662,4.39e-07,2;UBERON:0010122,4.39e-07,2;UBERON:0001894,5.69e-07,7;UBERON:0006222,5.69e-07,7;UBERON:0001876,9.86e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.410623275218653,0.87879847716362,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.825354125820202,0.417989933073621,1.03366703667732,1.42306505074684,1.67360306382335,0,0.760272105718513,0.488124115096339,0.367663080345869,0,1.51809538082936,0.44905874525234,1.12611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.927708378250397,0.464775771478074,0.829288440122964,0.756962552626885,1.45990943630332,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,1.9882952955326,1.82870241333667,0,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,0,0,1.93866549219044,1.76259386507517,0,0,0,0,0,0,0,0.689486746482929,0,0,4.42870692906919,1.92954301800653,1.52581736317083,2.54332297841817,0.886642856860642,1.97446857438575,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,2.77495773870551,0,1.73110911793673,0,0.176915129006678,0,0,0,0,2.42644078730437,0.802577647298789,2.57690890297873,0,0,0,0.789168805698781,0,1.22429104652196,0.884612114798832,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,2.40581024632339,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.509991088181609,0,6.60462317580768,2.46429682005587,0,0,0,0.837847203816763,1.14580212005842,0,0,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0,0,1.59045937961861,2.04305109167363,1.60753148465019,1.51293380256957,1.66176135211674,0,0,2.00473536971481,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,4.91275234173892,1.85125642439766,0,0,0.747511887973863,0.314408610199332,1.65695622138878,0,0,0,0,1.63205341010842,1.7548292581589,1.22538230705385,1.96723578425883,0,2.65820453990096,1.46431517882356,1.1267183763585,2.29363678276028,2.44043913381075,1.73869928235874,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,2.11956442818316,0,2.23487402680012,2.46139637088906,0.756215088665154,0.760729777106397,1.77623210195036,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,1.08060135389431,3.90539049306924,0.826747186004736,1.8390584956233,0,0,0.496211178389294,0,0,0,1.3451348888753,0.606965604236632,0.227662191351298,0.177404740325278,0,0,2.85472878502693,1.31545547125698,0,0,0.627944742804112,3.45654297815204,0,0.913158720509496,0.647782773655864,0.9555033757741,0.142953088353313,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,1.78968690876468,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,3.33724394095407,3.86160320425212,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0,0,0,0,2.19100916473955,0,2.58011249672612,0,0.407948941145488,0,1.5870805215462,0,0,0,1.64016352285603,0.764859003745869,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.227336094654718,0.535928260312357,4.1458471972939,2.68925789240928,0,1.42838658878244,0,0,0.112131862580613,0.572824424503484,0.404234377916439,0.435433495793923,0.684466602170562,0.0673520530145875,0.358611026963382,1.33064142618405,0,0,0,0,0,0.122241444182866,0.813792356631477,1.99727032255654,0.201273793591026,0 | |||
|short_description=p5@PREX2 | |||
}} |
Latest revision as of 22:42, 18 September 2015
Short description: | p5@PREX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PREX2_5end |
Coexpression cluster: | C1544_caudate_globus_optic_locus_spinal_hippocampus_thalamus |
Association with transcript: | -6bp_to_ENST00000529398, NM_024870, NM_025170, uc003xxu.1, uc003xxv.1, uc011lez.1_5end |
EntrezGene: | PREX2 |
HGNC: | 22950 |
UniProt: | Q70Z35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data