FFCP PHASE1:Hg19::chr5:87968909..87968913,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |HGNC=42810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=229bp_to_ENST00000505030_5end | |association_with_transcript=229bp_to_ENST00000505030_5end | ||
|cluster_id=chr5:87968909..87968913,- | |||
|coexpression_cluster_id=C561 | |||
|description=CAGE_peak_2_at_LINC00461_5end | |description=CAGE_peak_2_at_LINC00461_5end | ||
|id=chr5:87968909..87968913,- | |id=chr5:87968909..87968913,- | ||
|ontology_enrichment_celltype=CL:0002319!6.01e-11!25;CL:0000128!7.05e-11!7;CL:0000126!7.05e-11!7;CL:0000127!7.05e-11!7;CL:0002453!7.05e-11!7;CL:0000095!3.63e-07!17;CL:0000123!3.63e-07!17;CL:0000243!6.67e-07!15;CL:0000125!6.67e-07!15;CL:0000030!6.67e-07!15;CL:0000339!6.67e-07!15 | |ontology_enrichment_celltype=CL:0002319!6.01e-11!25;CL:0000128!7.05e-11!7;CL:0000126!7.05e-11!7;CL:0000127!7.05e-11!7;CL:0002453!7.05e-11!7;CL:0000095!3.63e-07!17;CL:0000123!3.63e-07!17;CL:0000243!6.67e-07!15;CL:0000125!6.67e-07!15;CL:0000030!6.67e-07!15;CL:0000339!6.67e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.90e-12;7!CL:0000126;3.90e-12;7!CL:0000127;3.90e-12;7!CL:0002319;1.79e-10;25!CL:0002605;2.71e-08;3!CL:0002603;1.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.22e-12,7;CL:0000126,4.22e-12,7;CL:0000127,4.22e-12,7;CL:0002453,4.22e-12,7;CL:0002319,1.84e-10,25;CL:0002605,2.68e-08,3;CL:0000047,5.17e-08,8;CL:0002603,1.20e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.31e-16;82!UBERON:0006215;2.30e-07;3!UBERON:0006241;2.77e-07;3!UBERON:0003057;2.77e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.55e-77!82;UBERON:0005743!8.27e-75!86;UBERON:0000073!7.80e-70!94;UBERON:0001016!7.80e-70!94;UBERON:0001049!3.34e-67!57;UBERON:0005068!3.34e-67!57;UBERON:0006241!3.34e-67!57;UBERON:0007135!3.34e-67!57;UBERON:0000955!1.25e-66!69;UBERON:0006238!1.25e-66!69;UBERON:0002616!2.67e-63!59;UBERON:0002346!1.55e-54!90;UBERON:0003075!1.49e-50!86;UBERON:0007284!1.49e-50!86;UBERON:0002780!1.26e-48!41;UBERON:0001890!1.26e-48!41;UBERON:0006240!1.26e-48!41;UBERON:0003080!3.72e-47!42;UBERON:0001893!3.69e-46!34;UBERON:0002020!8.38e-46!34;UBERON:0003528!8.38e-46!34;UBERON:0002791!1.03e-44!33;UBERON:0001869!1.85e-43!32;UBERON:0007023!1.52e-39!115;UBERON:0000924!2.04e-38!173;UBERON:0006601!2.04e-38!173;UBERON:0000033!2.55e-35!123;UBERON:0004121!3.00e-35!169;UBERON:0000956!3.41e-34!25;UBERON:0000203!3.41e-34!25;UBERON:0003056!1.23e-33!61;UBERON:0000153!1.04e-32!129;UBERON:0007811!1.04e-32!129;UBERON:0002619!8.77e-30!22;UBERON:0001950!5.41e-27!20;UBERON:0003076!2.03e-20!15;UBERON:0003057!2.03e-20!15;UBERON:0004732!7.27e-18!13;UBERON:0004733!9.61e-17!12;UBERON:0002028!9.61e-17!12;UBERON:0007277!9.61e-17!12;UBERON:0002680!4.16e-13!9;UBERON:0001895!4.16e-13!9;UBERON:0010092!4.16e-13!9;UBERON:0002420!6.25e-13!9;UBERON:0007245!6.25e-13!9;UBERON:0010009!6.25e-13!9;UBERON:0010011!6.25e-13!9;UBERON:0000454!6.25e-13!9;UBERON:0002308!7.43e-13!9;UBERON:0000125!7.43e-13!9;UBERON:0000025!7.98e-13!194;UBERON:0009663!2.63e-10!7;UBERON:0000200!1.68e-09!6;UBERON:0001871!1.76e-09!7;UBERON:0002037!2.82e-09!6;UBERON:0006215!2.82e-09!6;UBERON:0004111!6.01e-09!241;UBERON:0002298!9.78e-09!8;UBERON:0001872!1.01e-08!5;UBERON:0000064!1.38e-08!219;UBERON:0000349!1.57e-08!5;UBERON:0002021!4.29e-08!5;UBERON:0000477!2.49e-07!286;UBERON:0000369!5.24e-07!4;UBERON:0002435!5.24e-07!4;UBERON:0000204!5.24e-07!4;UBERON:0010082!5.24e-07!4 | |ontology_enrichment_uberon=UBERON:0001017!4.55e-77!82;UBERON:0005743!8.27e-75!86;UBERON:0000073!7.80e-70!94;UBERON:0001016!7.80e-70!94;UBERON:0001049!3.34e-67!57;UBERON:0005068!3.34e-67!57;UBERON:0006241!3.34e-67!57;UBERON:0007135!3.34e-67!57;UBERON:0000955!1.25e-66!69;UBERON:0006238!1.25e-66!69;UBERON:0002616!2.67e-63!59;UBERON:0002346!1.55e-54!90;UBERON:0003075!1.49e-50!86;UBERON:0007284!1.49e-50!86;UBERON:0002780!1.26e-48!41;UBERON:0001890!1.26e-48!41;UBERON:0006240!1.26e-48!41;UBERON:0003080!3.72e-47!42;UBERON:0001893!3.69e-46!34;UBERON:0002020!8.38e-46!34;UBERON:0003528!8.38e-46!34;UBERON:0002791!1.03e-44!33;UBERON:0001869!1.85e-43!32;UBERON:0007023!1.52e-39!115;UBERON:0000924!2.04e-38!173;UBERON:0006601!2.04e-38!173;UBERON:0000033!2.55e-35!123;UBERON:0004121!3.00e-35!169;UBERON:0000956!3.41e-34!25;UBERON:0000203!3.41e-34!25;UBERON:0003056!1.23e-33!61;UBERON:0000153!1.04e-32!129;UBERON:0007811!1.04e-32!129;UBERON:0002619!8.77e-30!22;UBERON:0001950!5.41e-27!20;UBERON:0003076!2.03e-20!15;UBERON:0003057!2.03e-20!15;UBERON:0004732!7.27e-18!13;UBERON:0004733!9.61e-17!12;UBERON:0002028!9.61e-17!12;UBERON:0007277!9.61e-17!12;UBERON:0002680!4.16e-13!9;UBERON:0001895!4.16e-13!9;UBERON:0010092!4.16e-13!9;UBERON:0002420!6.25e-13!9;UBERON:0007245!6.25e-13!9;UBERON:0010009!6.25e-13!9;UBERON:0010011!6.25e-13!9;UBERON:0000454!6.25e-13!9;UBERON:0002308!7.43e-13!9;UBERON:0000125!7.43e-13!9;UBERON:0000025!7.98e-13!194;UBERON:0009663!2.63e-10!7;UBERON:0000200!1.68e-09!6;UBERON:0001871!1.76e-09!7;UBERON:0002037!2.82e-09!6;UBERON:0006215!2.82e-09!6;UBERON:0004111!6.01e-09!241;UBERON:0002298!9.78e-09!8;UBERON:0001872!1.01e-08!5;UBERON:0000064!1.38e-08!219;UBERON:0000349!1.57e-08!5;UBERON:0002021!4.29e-08!5;UBERON:0000477!2.49e-07!286;UBERON:0000369!5.24e-07!4;UBERON:0002435!5.24e-07!4;UBERON:0000204!5.24e-07!4;UBERON:0010082!5.24e-07!4 | ||
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|short_description=p2@LINC00461 | |short_description=p2@LINC00461 | ||
}} | }} |
Latest revision as of 03:02, 19 September 2015
Short description: | p2@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00461_5end |
Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
Association with transcript: | 229bp_to_ENST00000505030_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.22e-12 | 7 |
macroglial cell | 4.22e-12 | 7 |
astrocyte | 4.22e-12 | 7 |
oligodendrocyte precursor cell | 4.22e-12 | 7 |
neural cell | 1.84e-10 | 25 |
astrocyte of the cerebral cortex | 2.68e-08 | 3 |
neuronal stem cell | 5.17e-08 | 8 |
astrocyte of the cerebellum | 1.20e-07 | 3 |