FFCP PHASE1:Hg19::chr18:40857447..40857461,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=2bp_to_uc010dng.2_5end | |||
|cluster_id=chr18:40857447..40857461,- | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_1_at_SYT4_5end | |||
|id=chr18:40857447..40857461,- | |||
|ontology_enrichment_celltype=CL:0000047!1.07e-08!8;CL:0000540!1.15e-08!6;CL:0000031!1.15e-08!6;CL:0000404!1.15e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000333;8.89e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.46e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.95e-20;82!UBERON:0006215;4.84e-08;3 | |||
|ontology_enrichment_disease=DOID:171!1.27e-10!10;DOID:169!8.32e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:171;2.22e-09;10!DOID:169;1.06e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.10e-09,10;DOID:169,1.06e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;7.73e-46;41!UBERON:0001890;7.73e-46;41!UBERON:0001869;1.45e-45;32!UBERON:0002619;1.89e-44;22!UBERON:0003528;9.78e-44;34!UBERON:0002020;9.78e-44;34!UBERON:0001893;1.72e-43;34!UBERON:0002791;1.25e-42;32!UBERON:0000073;1.46e-42;53!UBERON:0002616;1.46e-42;53!UBERON:0001950;7.21e-41;20!UBERON:0000956;1.79e-38;25!UBERON:0000203;1.79e-38;25!UBERON:0001017;5.69e-31;75!UBERON:0000955;3.94e-30;68!UBERON:0001016;4.11e-29;83!UBERON:0004732;3.49e-15;13!UBERON:0001894;7.22e-15;7!UBERON:0001871;4.97e-14;6!UBERON:0004733;1.13e-13;12!UBERON:0002028;1.13e-13;12!UBERON:0000125;1.80e-13;9!UBERON:0002308;1.80e-13;9!UBERON:0002420;2.20e-13;9!UBERON:0007245;2.20e-13;9!UBERON:0010009;2.20e-13;9!UBERON:0010011;2.20e-13;9!UBERON:0000454;2.20e-13;9!UBERON:0000200;6.74e-13;6!UBERON:0007023;8.05e-13;114!UBERON:0002298;1.32e-12;6!UBERON:0011216;2.67e-12;132!UBERON:0001872;3.73e-11;5!UBERON:0002021;3.89e-11;5!UBERON:0000349;1.40e-10;5!UBERON:0003296;5.03e-10;4!UBERON:0010133;5.03e-10;4!UBERON:0009663;5.61e-10;7!UBERON:0002784;3.76e-09;4!UBERON:0000369;8.38e-09;4!UBERON:0002435;8.38e-09;4!UBERON:0000204;8.38e-09;4!UBERON:0002680;9.38e-09;9!UBERON:0001895;9.38e-09;9!UBERON:0001870;1.78e-07;3!UBERON:0000988;3.00e-07;3!UBERON:0001896;5.23e-07;3!UBERON:0005290;5.23e-07;3!UBERON:0010314;5.52e-07;132!UBERON:0005383;7.12e-07;3!UBERON:0005382;7.12e-07;3!UBERON:0000013;8.89e-07;5!UBERON:0002410;8.89e-07;5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,4.14644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.824469933283,42.5308847027732,177.399724989075,51.0351001322531,0,0,0,0,0,0,0,0,0,0,0,0,3.10419213877515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.84198648969,9.84685914873589,0,0,0,1.39473591775749,0.276283915531148,97.4979734196048,0,0,0,0,0,0,0.591860433821602,0,0,9.69332746095218,33.4892834364283,81.8416571804896,0,0,0,0,0,0,7.23961083807076,10.7893706951804,5.72962483279864,15.9433449446491,11.6978545466646,109.8588501483,143.200141610936,126.198833293165,43.6576940336405,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,3.66618086960175,0,0,0,3.16785325009182,2.40773294189637,13.118808960619,0,0,0,0,1.20990716048664,92.433974012408,1.0741718536843,0.751617097072463,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,10.8470755574656,0,0,50.8385691525706,0,0.0801588202515337,0,0,0,0,183.263457716578,0,0,0,0,0,0,0,9.00630433064684,1.64286454670392,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,24.6521203840884,11.3048827072608,0.482259445395058,1.51293380256957,0.415440338029185,0,0,37.1179791180531,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,16.8067843270016,24.727496525883,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,46.0755453582833,38.4382734441184,22.53436752717,13.7618206965617,17.0830739366753,27.3845136971501,3.04366996859708,0,0,0,0,9.83503302194451,16.5209972616341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7292707743594,0,0,0,0,0,0,0,0,1.20550485762571,0,0,0.139879507719444,0,28.5204448007143,5.17559094704073,5.81883984866817,23.916910764051,0,1.91317428091515,65.4380835287532,0.558644917973244,0,0,256.18263945135,0,0,33.8488016258342,29.7562810283728,12.4514410064578,39.7925746627065,274.001933793008,16.1136398241628,22.6065903884592,5.71077681036618,0,0,0,0,0,0,0,0.676892955143315,0,2.34454203369928,0,0,0,37.0105963708803,24.2134210570293,17.3616909060995,31.32741023579,147.136223625901,0,0,0.351742488719241,0,141.960986507746,177.22152160932,47.3433171304573,58.9645075599861,0,0,0,47.1709946859212,22.9546979734343,0,0,0.235479278551542,24.1958008470643,0,3.65263488203798,0,0,3.4308741204795,0,0,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,0,0,0,0,0,5.37167092935694,0.594600453887843,0.11294608203896,5.71690687076231,100.390290971838,0.308696632431779,0.655678681511872,4.23285566725371,0.245148321753905,68.8175517536748,16.8825281718853,6.53502080719589,13.5249832826688,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.430018749454354,0,17.6097959594469,160.140703354919,3.1741610430924,0,0,0,0,0,2.78736702225161,0.101988829741982,0,0,0,0.0757786982182394,0,16.5833887891756,3.62015485516633,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0.358611026963382,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p1@SYT4 | |||
}} |
Latest revision as of 13:50, 19 September 2015
Short description: | p1@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 2bp_to_uc010dng.2_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.46e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.10e-09 | 10 |
neuroendocrine tumor | 1.06e-08 | 6 |