FFCP PHASE1:Hg19::chrX:13835147..13835224,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:13835147..13835224,- to FFCP PHASE1:Hg19::chrX:13835147..13835224,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2824 | |EntrezGene=2824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |HGNC=4461 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z613 | |UniProt=B7Z613 | ||
|association_with_transcript=0bp_to_ENST00000355135,ENST00000493677_5end | |||
|cluster_id=chrX:13835147..13835224,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GPM6B_5end | |||
|id=chrX:13835147..13835224,- | |||
|ontology_enrichment_celltype=CL:0000128!7.40e-08!7;CL:0000126!7.40e-08!7;CL:0000127!7.40e-08!7;CL:0002453!7.40e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.29e-07;7!CL:0000126;3.29e-07;7!CL:0000127;3.29e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.32e-07,7;CL:0000126,3.32e-07,7;CL:0000127,3.32e-07,7;CL:0002453,3.32e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.28e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.45e-80!115;UBERON:0001049!2.50e-68!57;UBERON:0005068!2.50e-68!57;UBERON:0006241!2.50e-68!57;UBERON:0007135!2.50e-68!57;UBERON:0001017!6.19e-62!82;UBERON:0005743!6.51e-60!86;UBERON:0002616!2.57e-57!59;UBERON:0000073!1.90e-55!94;UBERON:0001016!1.90e-55!94;UBERON:0000955!1.41e-53!69;UBERON:0006238!1.41e-53!69;UBERON:0003075!1.36e-51!86;UBERON:0007284!1.36e-51!86;UBERON:0003080!1.45e-51!42;UBERON:0002780!9.94e-51!41;UBERON:0001890!9.94e-51!41;UBERON:0006240!9.94e-51!41;UBERON:0002346!3.30e-48!90;UBERON:0001893!8.04e-43!34;UBERON:0002020!1.37e-42!34;UBERON:0003528!1.37e-42!34;UBERON:0002791!1.47e-41!33;UBERON:0001869!2.72e-40!32;UBERON:0003056!3.24e-37!61;UBERON:0004121!7.24e-35!169;UBERON:0000924!2.16e-33!173;UBERON:0006601!2.16e-33!173;UBERON:0000153!3.69e-33!129;UBERON:0007811!3.69e-33!129;UBERON:0000033!1.09e-32!123;UBERON:0000956!8.34e-32!25;UBERON:0000203!8.34e-32!25;UBERON:0002619!7.28e-29!22;UBERON:0001950!3.25e-26!20;UBERON:0003076!4.12e-17!15;UBERON:0003057!4.12e-17!15;UBERON:0000025!4.05e-15!194;UBERON:0004732!6.13e-15!13;UBERON:0004111!1.01e-13!241;UBERON:0004733!1.12e-13!12;UBERON:0002028!1.12e-13!12;UBERON:0007277!1.12e-13!12;UBERON:0000477!9.46e-13!286;UBERON:0002420!1.57e-12!9;UBERON:0007245!1.57e-12!9;UBERON:0010009!1.57e-12!9;UBERON:0010011!1.57e-12!9;UBERON:0000454!1.57e-12!9;UBERON:0002308!4.59e-12!9;UBERON:0000125!4.59e-12!9;UBERON:0000481!7.18e-12!347;UBERON:0000119!1.47e-11!312;UBERON:0000483!1.62e-11!309;UBERON:0000922!7.00e-11!612;UBERON:0001871!8.85e-11!7;UBERON:0000475!1.01e-10!365;UBERON:0002680!2.01e-10!9;UBERON:0001895!2.01e-10!9;UBERON:0010092!2.01e-10!9;UBERON:0002298!3.40e-10!8;UBERON:0009663!6.48e-10!7;UBERON:0000468!1.39e-09!659;UBERON:0000064!1.77e-09!219;UBERON:0000200!3.83e-09!6;UBERON:0001894!3.84e-09!7;UBERON:0006222!3.84e-09!7;UBERON:0000062!2.19e-08!511;UBERON:0002050!2.27e-08!605;UBERON:0005423!2.27e-08!605;UBERON:0000349!4.16e-08!5;UBERON:0000923!4.78e-08!604;UBERON:0005291!4.78e-08!604;UBERON:0006598!4.78e-08!604;UBERON:0002532!4.78e-08!604;UBERON:0000467!1.10e-07!625;UBERON:0000480!1.31e-07!626;UBERON:0001872!1.98e-07!5;UBERON:0002021!2.63e-07!5;UBERON:0002037!3.59e-07!6;UBERON:0006215!3.59e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.81e-44;34!UBERON:0002791;2.97e-44;32!UBERON:0001869;3.33e-44;32!UBERON:0003528;3.36e-44;34!UBERON:0002020;3.36e-44;34!UBERON:0002780;9.85e-44;41!UBERON:0001890;9.85e-44;41!UBERON:0000073;2.42e-42;53!UBERON:0002616;2.42e-42;53!UBERON:0000956;2.14e-38;25!UBERON:0000203;2.14e-38;25!UBERON:0002619;8.24e-35;22!UBERON:0001950;1.39e-31;20!UBERON:0001017;2.06e-28;75!UBERON:0000955;3.48e-28;68!UBERON:0001016;1.60e-24;83!UBERON:0007023;1.06e-19;114!UBERON:0004732;1.33e-15;13!UBERON:0002420;6.93e-15;9!UBERON:0007245;6.93e-15;9!UBERON:0010009;6.93e-15;9!UBERON:0010011;6.93e-15;9!UBERON:0000454;6.93e-15;9!UBERON:0000125;2.54e-14;9!UBERON:0002308;2.54e-14;9!UBERON:0004733;4.20e-14;12!UBERON:0002028;4.20e-14;12!UBERON:0009663;1.04e-11;7!UBERON:0011216;2.15e-11;132!UBERON:0001871;2.68e-11;6!UBERON:0001894;8.81e-11;7!UBERON:0000200;9.00e-11;6!UBERON:0002680;3.36e-10;9!UBERON:0001895;3.36e-10;9!UBERON:0002298;1.42e-09;6!UBERON:0000349;1.61e-09;5!UBERON:0001872;1.07e-08;5!UBERON:0002021;1.50e-08;5!UBERON:0000369;1.65e-07;4!UBERON:0002435;1.65e-07;4!UBERON:0000204;1.65e-07;4!UBERON:0002784;4.09e-07;4!UBERON:0010314;5.71e-07;132!UBERON:0000922;6.09e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.60e-79,56;UBERON:0005068,2.60e-79,56;UBERON:0006241,2.60e-79,56;UBERON:0007135,2.60e-79,56;UBERON:0007023,3.71e-77,114;UBERON:0000073,9.47e-75,53;UBERON:0002616,9.47e-75,53;UBERON:0001017,1.22e-73,81;UBERON:0001016,1.26e-66,89;UBERON:0000955,3.83e-63,68;UBERON:0006238,3.83e-63,68;UBERON:0002780,2.08e-61,41;UBERON:0001890,2.08e-61,41;UBERON:0003080,2.08e-61,41;UBERON:0006240,2.08e-61,41;UBERON:0003075,5.50e-61,82;UBERON:0007284,5.50e-61,82;UBERON:0002346,3.58e-57,86;UBERON:0001893,9.02e-52,34;UBERON:0003528,1.72e-51,34;UBERON:0002020,1.72e-51,34;UBERON:0002791,9.46e-49,32;UBERON:0001869,1.09e-48,32;UBERON:0010371,1.20e-48,104;UBERON:0003056,3.16e-45,61;UBERON:0004121,6.51e-40,171;UBERON:0000924,6.51e-40,171;UBERON:0006601,6.51e-40,171;UBERON:0010314,4.98e-39,132;UBERON:0000956,2.37e-38,25;UBERON:0000203,2.37e-38,25;UBERON:0002619,9.08e-35,22;UBERON:0011216,3.28e-33,223;UBERON:0001950,1.53e-31,20;UBERON:0003076,3.17e-18,15;UBERON:0003057,3.17e-18,15;UBERON:0000025,2.10e-16,192;UBERON:0004732,1.33e-15,13;UBERON:0004111,2.46e-15,240;UBERON:0002420,6.88e-15,9;UBERON:0007245,6.88e-15,9;UBERON:0010009,6.88e-15,9;UBERON:0010011,6.88e-15,9;UBERON:0000454,6.88e-15,9;UBERON:0000125,2.52e-14,9;UBERON:0002308,2.52e-14,9;UBERON:0004733,4.24e-14,12;UBERON:0002028,4.24e-14,12;UBERON:0007277,4.24e-14,12;UBERON:0009663,1.03e-11,7;UBERON:0000922,2.52e-11,592;UBERON:0001871,2.92e-11,6;UBERON:0000200,8.94e-11,6;UBERON:0001894,8.95e-11,7;UBERON:0006222,8.95e-11,7;UBERON:0000483,2.09e-10,306;UBERON:0002680,3.38e-10,9;UBERON:0001895,3.38e-10,9;UBERON:0010092,3.38e-10,9;UBERON:0000119,4.14e-10,309;UBERON:0002050,5.55e-10,564;UBERON:0000923,8.11e-10,560;UBERON:0010316,8.11e-10,560;UBERON:0005291,8.11e-10,560;UBERON:0006598,8.11e-10,560;UBERON:0010317,8.11e-10,560;UBERON:0002532,8.11e-10,560;UBERON:0002298,1.42e-09,6;UBERON:0000349,1.62e-09,5;UBERON:0005423,3.22e-09,581;UBERON:0001872,1.07e-08,5;UBERON:0002021,1.51e-08,5;UBERON:0000369,1.66e-07,4;UBERON:0002435,1.66e-07,4;UBERON:0000204,1.66e-07,4;UBERON:0010082,1.66e-07,4;UBERON:0002784,4.12e-07,4 | |||
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|short_description=p2@GPM6B | |||
}} | }} |
Latest revision as of 16:54, 19 September 2015
Short description: | p2@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPM6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000355135, ENST00000493677_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | B7Z613 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.32e-07 | 7 |
macroglial cell | 3.32e-07 | 7 |
astrocyte | 3.32e-07 | 7 |
oligodendrocyte precursor cell | 3.32e-07 | 7 |