FFCP PHASE1:Hg19::chr1:205198835..205198864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9911 | |EntrezGene=9911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24239 | |HGNC=24239 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495538_5end | |association_with_transcript=0bp_to_ENST00000495538_5end | ||
|cluster_id=chr1:205198835..205198864,+ | |||
|description=CAGE_peak_3_at_TMCC2_5end | |description=CAGE_peak_3_at_TMCC2_5end | ||
|id=chr1:205198835..205198864,+ | |id=chr1:205198835..205198864,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000838!2.52e-07!52 | |ontology_enrichment_celltype=CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000838!2.52e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.77e-15;82!UBERON:0006241;1.75e-07;3!UBERON:0003057;1.75e-07;3!UBERON:0006215;2.63e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;8.37e-41;34!UBERON:0002780;1.01e-40;41!UBERON:0001890;1.01e-40;41!UBERON:0000073;8.55e-40;53!UBERON:0002616;8.55e-40;53!UBERON:0003528;4.45e-39;34!UBERON:0002020;4.45e-39;34!UBERON:0002791;1.73e-38;32!UBERON:0001869;2.74e-38;32!UBERON:0002619;4.24e-34;22!UBERON:0001950;3.10e-30;20!UBERON:0000956;1.85e-29;25!UBERON:0000203;1.85e-29;25!UBERON:0001017;1.22e-25;75!UBERON:0000955;6.50e-25;68!UBERON:0000125;1.01e-19;9!UBERON:0002308;1.01e-19;9!UBERON:0001016;1.12e-19;83!UBERON:0002420;4.32e-19;9!UBERON:0007245;4.32e-19;9!UBERON:0010009;4.32e-19;9!UBERON:0010011;4.32e-19;9!UBERON:0000454;4.32e-19;9!UBERON:0000178;2.82e-18;15!UBERON:0000179;2.82e-18;15!UBERON:0000463;2.82e-18;15!UBERON:0007023;1.92e-17;114!UBERON:0004732;1.49e-16;13!UBERON:0009663;1.37e-15;7!UBERON:0004733;1.67e-14;12!UBERON:0002028;1.67e-14;12!UBERON:0002298;1.96e-14;6!UBERON:0000200;2.51e-13;6!UBERON:0000349;5.20e-11;5!UBERON:0001894;6.30e-11;7!UBERON:0001871;8.54e-11;6!UBERON:0002390;1.21e-10;32!UBERON:0000369;4.23e-09;4!UBERON:0002435;4.23e-09;4!UBERON:0000204;4.23e-09;4!UBERON:0002680;8.73e-09;9!UBERON:0001895;8.73e-09;9!UBERON:0001896;4.11e-08;3!UBERON:0005290;4.11e-08;3!UBERON:0000988;5.35e-08;3!UBERON:0001872;6.82e-08;5!UBERON:0011216;1.28e-07;132!UBERON:0001870;1.74e-07;3!UBERON:0002240;1.75e-07;3!UBERON:0005174;1.75e-07;3!UBERON:0001137;1.75e-07;3!UBERON:0002021;2.46e-07;5!UBERON:0005383;3.59e-07;3!UBERON:0005382;3.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.67e-77,56;UBERON:0005068,9.67e-77,56;UBERON:0006241,9.67e-77,56;UBERON:0007135,9.67e-77,56;UBERON:0000073,1.07e-70,53;UBERON:0002616,1.07e-70,53;UBERON:0007023,2.03e-63,114;UBERON:0000955,5.78e-57,68;UBERON:0006238,5.78e-57,68;UBERON:0002780,7.68e-57,41;UBERON:0001890,7.68e-57,41;UBERON:0003080,7.68e-57,41;UBERON:0006240,7.68e-57,41;UBERON:0001017,2.32e-55,81;UBERON:0001016,5.90e-51,89;UBERON:0003075,9.38e-51,82;UBERON:0007284,9.38e-51,82;UBERON:0002346,9.51e-48,86;UBERON:0003528,4.46e-47,34;UBERON:0002020,4.46e-47,34;UBERON:0001893,4.62e-47,34;UBERON:0002791,5.52e-43,32;UBERON:0001869,1.06e-42,32;UBERON:0010371,1.32e-40,104;UBERON:0003056,1.76e-37,61;UBERON:0002619,3.82e-34,22;UBERON:0010314,1.94e-30,132;UBERON:0001950,2.59e-30,20;UBERON:0000956,1.68e-29,25;UBERON:0000203,1.68e-29,25;UBERON:0004121,4.93e-22,171;UBERON:0000924,4.93e-22,171;UBERON:0006601,4.93e-22,171;UBERON:0003076,4.88e-20,15;UBERON:0003057,4.88e-20,15;UBERON:0000125,9.41e-20,9;UBERON:0002308,9.41e-20,9;UBERON:0002420,3.80e-19,9;UBERON:0007245,3.80e-19,9;UBERON:0010009,3.80e-19,9;UBERON:0010011,3.80e-19,9;UBERON:0000454,3.80e-19,9;UBERON:0011216,1.36e-18,223;UBERON:0000178,3.42e-18,15;UBERON:0000179,3.42e-18,15;UBERON:0000463,3.42e-18,15;UBERON:0000025,3.84e-18,192;UBERON:0004732,1.51e-16,13;UBERON:0009663,1.33e-15,7;UBERON:0004733,1.68e-14,12;UBERON:0002028,1.68e-14,12;UBERON:0007277,1.68e-14,12;UBERON:0002298,1.90e-14,6;UBERON:0000200,2.83e-13,6;UBERON:0004111,1.66e-12,240;UBERON:0000349,4.94e-11,5;UBERON:0001894,6.14e-11,7;UBERON:0006222,6.14e-11,7;UBERON:0001871,7.09e-11,6;UBERON:0000483,9.60e-11,306;UBERON:0000119,1.70e-10,309;UBERON:0000369,4.02e-09,4;UBERON:0002435,4.02e-09,4;UBERON:0000204,4.02e-09,4;UBERON:0010082,4.02e-09,4;UBERON:0002680,8.80e-09,9;UBERON:0001895,8.80e-09,9;UBERON:0010092,8.80e-09,9;UBERON:0001896,4.11e-08,3;UBERON:0005290,4.11e-08,3;UBERON:0010096,4.11e-08,3;UBERON:0000988,5.18e-08,3;UBERON:0001872,6.83e-08,5;UBERON:0002240,1.70e-07,3;UBERON:0005174,1.70e-07,3;UBERON:0001137,1.70e-07,3;UBERON:0001870,1.78e-07,3;UBERON:0002021,2.52e-07,5;UBERON:0005383,3.55e-07,3;UBERON:0005382,3.55e-07,3 | |||
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|short_description=p3@TMCC2 | |short_description=p3@TMCC2 | ||
}} | }} |
Latest revision as of 02:30, 20 September 2015
Short description: | p3@TMCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMCC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495538_5end |
EntrezGene: | TMCC2 |
HGNC: | 24239 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data