FFCP PHASE1:Hg19::chr6:99282438..99282457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5454 | |EntrezGene=5454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9215 | |HGNC=9215 | ||
|TSSclassifier=strong | |||
|UniProt=P20265,B3KTH8 | |UniProt=P20265,B3KTH8 | ||
|association_with_transcript=-122bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | |association_with_transcript=-122bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | ||
|cluster_id=chr6:99282438..99282457,+ | |||
|coexpression_cluster_id=C2872 | |coexpression_cluster_id=C2872 | ||
|description=CAGE_peak_2_at_POU3F2_5end | |description=CAGE_peak_2_at_POU3F2_5end | ||
|id=chr6:99282438..99282457,+ | |id=chr6:99282438..99282457,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.06e-15!25;CL:0000128!3.35e-11!7;CL:0000126!3.35e-11!7;CL:0000127!3.35e-11!7;CL:0002453!3.35e-11!7;CL:0000095!5.64e-11!17;CL:0000123!5.64e-11!17;CL:0000133!3.32e-10!59;CL:0000333!4.62e-10!41;CL:0000243!1.46e-08!15;CL:0000125!1.46e-08!15;CL:0000030!1.46e-08!15;CL:0000339!1.46e-08!15;CL:0000221!2.33e-07!71 | |ontology_enrichment_celltype=CL:0002319!5.06e-15!25;CL:0000128!3.35e-11!7;CL:0000126!3.35e-11!7;CL:0000127!3.35e-11!7;CL:0002453!3.35e-11!7;CL:0000095!5.64e-11!17;CL:0000123!5.64e-11!17;CL:0000133!3.32e-10!59;CL:0000333!4.62e-10!41;CL:0000243!1.46e-08!15;CL:0000125!1.46e-08!15;CL:0000030!1.46e-08!15;CL:0000339!1.46e-08!15;CL:0000221!2.33e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.70e-16;25!CL:0000128;2.69e-13;7!CL:0000126;2.69e-13;7!CL:0000127;2.69e-13;7!CL:0000095;1.52e-09;17!CL:0002605;3.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.07e-16,25;CL:0000128,3.42e-13,7;CL:0000126,3.42e-13,7;CL:0000127,3.42e-13,7;CL:0002453,3.42e-13,7;CL:0000095,1.66e-09,17;CL:0000123,1.66e-09,17;CL:0000133,1.73e-09,59;CL:0002605,3.92e-09,3;CL:0000047,1.26e-08,8;CL:0000333,2.70e-07,41;CL:0000221,4.85e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.75e-15;82!UBERON:0006241;8.54e-08;3!UBERON:0003057;8.54e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!2.03e-08!22;DOID:2994!2.03e-08!22;DOID:171!9.09e-08!10 | |ontology_enrichment_disease=DOID:3095!2.03e-08!22;DOID:2994!2.03e-08!22;DOID:171!9.09e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:171;3.36e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.46e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.98e-61!82;UBERON:0000073!3.20e-58!94;UBERON:0001016!3.20e-58!94;UBERON:0005743!5.22e-57!86;UBERON:0001049!3.03e-55!57;UBERON:0005068!3.03e-55!57;UBERON:0006241!3.03e-55!57;UBERON:0007135!3.03e-55!57;UBERON:0000955!3.99e-52!69;UBERON:0006238!3.99e-52!69;UBERON:0002616!1.38e-45!59;UBERON:0002780!3.07e-40!41;UBERON:0001890!3.07e-40!41;UBERON:0006240!3.07e-40!41;UBERON:0002020!1.73e-39!34;UBERON:0003528!1.73e-39!34;UBERON:0001893!2.96e-39!34;UBERON:0003080!5.30e-39!42;UBERON:0002346!5.51e-39!90;UBERON:0002791!4.43e-38!33;UBERON:0001869!1.68e-36!32;UBERON:0003075!2.91e-34!86;UBERON:0007284!2.91e-34!86;UBERON:0000924!1.48e-33!173;UBERON:0006601!1.48e-33!173;UBERON:0004121!8.58e-30!169;UBERON:0000956!8.67e-28!25;UBERON:0000203!8.67e-28!25;UBERON:0000033!2.13e-25!123;UBERON:0003056!7.31e-25!61;UBERON:0000153!2.12e-23!129;UBERON:0007811!2.12e-23!129;UBERON:0002619!2.80e-23!22;UBERON:0001950!1.23e-20!20;UBERON:0003076!7.29e-17!15;UBERON:0003057!7.29e-17!15;UBERON:0007023!1.51e-15!115;UBERON:0004732!3.12e-14!13;UBERON:0002308!4.14e-13!9;UBERON:0000125!4.14e-13!9;UBERON:0004733!4.27e-13!12;UBERON:0002028!4.27e-13!12;UBERON:0007277!4.27e-13!12;UBERON:0002680!4.59e-12!9;UBERON:0001895!4.59e-12!9;UBERON:0010092!4.59e-12!9;UBERON:0009663!1.96e-10!7;UBERON:0002420!3.38e-10!9;UBERON:0007245!3.38e-10!9;UBERON:0010009!3.38e-10!9;UBERON:0010011!3.38e-10!9;UBERON:0000454!3.38e-10!9;UBERON:0002021!1.84e-08!5;UBERON:0002037!2.91e-08!6;UBERON:0006215!2.91e-08!6;UBERON:0001872!3.14e-08!5;UBERON:0000025!6.60e-08!194;UBERON:0002298!9.65e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!8.98e-61!82;UBERON:0000073!3.20e-58!94;UBERON:0001016!3.20e-58!94;UBERON:0005743!5.22e-57!86;UBERON:0001049!3.03e-55!57;UBERON:0005068!3.03e-55!57;UBERON:0006241!3.03e-55!57;UBERON:0007135!3.03e-55!57;UBERON:0000955!3.99e-52!69;UBERON:0006238!3.99e-52!69;UBERON:0002616!1.38e-45!59;UBERON:0002780!3.07e-40!41;UBERON:0001890!3.07e-40!41;UBERON:0006240!3.07e-40!41;UBERON:0002020!1.73e-39!34;UBERON:0003528!1.73e-39!34;UBERON:0001893!2.96e-39!34;UBERON:0003080!5.30e-39!42;UBERON:0002346!5.51e-39!90;UBERON:0002791!4.43e-38!33;UBERON:0001869!1.68e-36!32;UBERON:0003075!2.91e-34!86;UBERON:0007284!2.91e-34!86;UBERON:0000924!1.48e-33!173;UBERON:0006601!1.48e-33!173;UBERON:0004121!8.58e-30!169;UBERON:0000956!8.67e-28!25;UBERON:0000203!8.67e-28!25;UBERON:0000033!2.13e-25!123;UBERON:0003056!7.31e-25!61;UBERON:0000153!2.12e-23!129;UBERON:0007811!2.12e-23!129;UBERON:0002619!2.80e-23!22;UBERON:0001950!1.23e-20!20;UBERON:0003076!7.29e-17!15;UBERON:0003057!7.29e-17!15;UBERON:0007023!1.51e-15!115;UBERON:0004732!3.12e-14!13;UBERON:0002308!4.14e-13!9;UBERON:0000125!4.14e-13!9;UBERON:0004733!4.27e-13!12;UBERON:0002028!4.27e-13!12;UBERON:0007277!4.27e-13!12;UBERON:0002680!4.59e-12!9;UBERON:0001895!4.59e-12!9;UBERON:0010092!4.59e-12!9;UBERON:0009663!1.96e-10!7;UBERON:0002420!3.38e-10!9;UBERON:0007245!3.38e-10!9;UBERON:0010009!3.38e-10!9;UBERON:0010011!3.38e-10!9;UBERON:0000454!3.38e-10!9;UBERON:0002021!1.84e-08!5;UBERON:0002037!2.91e-08!6;UBERON:0006215!2.91e-08!6;UBERON:0001872!3.14e-08!5;UBERON:0000025!6.60e-08!194;UBERON:0002298!9.65e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.44e-46;34!UBERON:0003528;5.67e-46;34!UBERON:0002020;5.67e-46;34!UBERON:0002791;1.11e-45;32!UBERON:0001869;1.88e-45;32!UBERON:0002780;5.94e-41;41!UBERON:0001890;5.94e-41;41!UBERON:0000956;8.80e-41;25!UBERON:0000203;8.80e-41;25!UBERON:0000073;7.05e-37;53!UBERON:0002616;7.05e-37;53!UBERON:0002619;1.25e-33;22!UBERON:0001017;1.60e-29;75!UBERON:0001950;2.08e-29;20!UBERON:0001016;5.02e-28;83!UBERON:0000955;1.16e-25;68!UBERON:0000125;7.70e-16;9!UBERON:0002308;7.70e-16;9!UBERON:0004732;6.74e-13;13!UBERON:0002021;1.24e-12;5!UBERON:0002420;4.04e-12;9!UBERON:0007245;4.04e-12;9!UBERON:0010009;4.04e-12;9!UBERON:0010011;4.04e-12;9!UBERON:0000454;4.04e-12;9!UBERON:0001872;5.12e-12;5!UBERON:0009663;9.54e-12;7!UBERON:0004733;3.12e-11;12!UBERON:0002028;3.12e-11;12!UBERON:0002346;1.30e-10;4!UBERON:0000923;1.30e-10;4!UBERON:0010316;1.30e-10;4!UBERON:0005291;1.30e-10;4!UBERON:0002298;1.17e-09;6!UBERON:0011216;1.36e-09;132!UBERON:0002680;7.48e-09;9!UBERON:0001895;7.48e-09;9!UBERON:0002050;1.77e-08;5!UBERON:0005423;1.77e-08;5!UBERON:0000349;5.72e-08;5!UBERON:0002240;8.54e-08;3!UBERON:0005174;8.54e-08;3!UBERON:0001137;8.54e-08;3!UBERON:0000988;1.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.80e-80,89;UBERON:0001017,1.20e-76,81;UBERON:0001049,2.48e-71,56;UBERON:0005068,2.48e-71,56;UBERON:0006241,2.48e-71,56;UBERON:0007135,2.48e-71,56;UBERON:0000073,3.73e-65,53;UBERON:0002616,3.73e-65,53;UBERON:0000955,4.15e-62,68;UBERON:0006238,4.15e-62,68;UBERON:0002346,2.74e-57,86;UBERON:0003528,5.89e-56,34;UBERON:0002020,5.89e-56,34;UBERON:0001893,1.33e-55,34;UBERON:0002780,4.52e-55,41;UBERON:0001890,4.52e-55,41;UBERON:0003080,4.52e-55,41;UBERON:0006240,4.52e-55,41;UBERON:0002791,1.32e-51,32;UBERON:0001869,3.08e-51,32;UBERON:0003075,8.35e-50,82;UBERON:0007284,8.35e-50,82;UBERON:0004121,9.80e-49,171;UBERON:0000924,9.80e-49,171;UBERON:0006601,9.80e-49,171;UBERON:0010371,5.25e-43,104;UBERON:0000956,6.43e-41,25;UBERON:0000203,6.43e-41,25;UBERON:0003056,6.57e-39,61;UBERON:0002619,9.29e-34,22;UBERON:0001950,1.44e-29,20;UBERON:0010314,3.53e-29,132;UBERON:0011216,5.50e-28,223;UBERON:0007023,6.74e-21,114;UBERON:0003076,1.05e-16,15;UBERON:0003057,1.05e-16,15;UBERON:0000125,3.53e-16,9;UBERON:0002308,3.53e-16,9;UBERON:0000025,1.87e-14,192;UBERON:0004732,6.82e-13,13;UBERON:0002021,1.29e-12,5;UBERON:0002420,2.65e-12,9;UBERON:0007245,2.65e-12,9;UBERON:0010009,2.65e-12,9;UBERON:0010011,2.65e-12,9;UBERON:0000454,2.65e-12,9;UBERON:0001872,3.03e-12,5;UBERON:0009663,5.63e-12,7;UBERON:0004733,3.01e-11,12;UBERON:0002028,3.01e-11,12;UBERON:0007277,3.01e-11,12;UBERON:0002298,8.98e-10,6;UBERON:0000483,2.38e-09,306;UBERON:0004111,2.41e-09,240;UBERON:0000119,3.87e-09,309;UBERON:0002680,8.02e-09,9;UBERON:0001895,8.02e-09,9;UBERON:0010092,8.02e-09,9;UBERON:0000349,6.18e-08,5;UBERON:0000988,8.66e-08,3;UBERON:0002240,8.66e-08,3;UBERON:0005174,8.66e-08,3;UBERON:0001137,8.66e-08,3;UBERON:0000923,4.86e-07,560;UBERON:0010316,4.86e-07,560;UBERON:0005291,4.86e-07,560;UBERON:0006598,4.86e-07,560;UBERON:0010317,4.86e-07,560;UBERON:0002532,4.86e-07,560;UBERON:0002050,7.16e-07,564 | |||
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|short_description=p2@POU3F2 | |short_description=p2@POU3F2 | ||
}} | }} |
Latest revision as of 05:55, 20 September 2015
Short description: | p2@POU3F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_POU3F2_5end |
Coexpression cluster: | C2872_neuroepithelioma_neuroblastoma_Astrocyte_Neurons_carcinoid_astrocytoma_Neural |
Association with transcript: | -122bp_to_ENST00000328345, NM_005604, uc003ppe.2_5end |
EntrezGene: | POU3F2 |
HGNC: | 9215 |
UniProt: | P20265B3KTH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.07e-16 | 25 |
oligodendrocyte | 3.42e-13 | 7 |
macroglial cell | 3.42e-13 | 7 |
astrocyte | 3.42e-13 | 7 |
oligodendrocyte precursor cell | 3.42e-13 | 7 |
neuron associated cell | 1.66e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.66e-09 | 17 |
neurectodermal cell | 1.73e-09 | 59 |
astrocyte of the cerebral cortex | 3.92e-09 | 3 |
neuronal stem cell | 1.26e-08 | 8 |
migratory neural crest cell | 2.70e-07 | 41 |
ectodermal cell | 4.85e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.46e-12 | 10 |