FFCP PHASE1:Hg19::chr5:132166579..132166616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134549 | |EntrezGene=134549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24084 | |HGNC=24084 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M3G4 | |UniProt=Q2M3G4 | ||
|association_with_transcript=0bp_to_ENST00000378679,NM_001172700,uc003kxx.2_5end | |association_with_transcript=0bp_to_ENST00000378679,NM_001172700,uc003kxx.2_5end | ||
|cluster_id=chr5:132166579..132166616,- | |||
|description=CAGE_peak_2_at_SHROOM1_5end | |description=CAGE_peak_2_at_SHROOM1_5end | ||
|id=chr5:132166579..132166616,- | |id=chr5:132166579..132166616,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.63e-08;12!CL:0000097;9.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.13e-08,12;CL:0000097,9.84e-07,5;CL:0002028,9.84e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.40e-20!57;UBERON:0005068!2.40e-20!57;UBERON:0006241!2.40e-20!57;UBERON:0007135!2.40e-20!57;UBERON:0004111!4.97e-20!241;UBERON:0005743!1.04e-19!86;UBERON:0000477!5.73e-19!286;UBERON:0000955!1.28e-18!69;UBERON:0006238!1.28e-18!69;UBERON:0001017!1.79e-18!82;UBERON:0000073!4.43e-18!94;UBERON:0001016!4.43e-18!94;UBERON:0002616!5.75e-18!59;UBERON:0003075!8.47e-18!86;UBERON:0007284!8.47e-18!86;UBERON:0007023!1.37e-17!115;UBERON:0000033!6.69e-17!123;UBERON:0000025!1.39e-16!194;UBERON:0000481!3.24e-16!347;UBERON:0002346!6.36e-16!90;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0000153!1.86e-15!129;UBERON:0007811!1.86e-15!129;UBERON:0000480!8.45e-15!626;UBERON:0003080!1.15e-14!42;UBERON:0000922!1.17e-14!612;UBERON:0000467!1.52e-14!625;UBERON:0000062!1.55e-14!511;UBERON:0002050!4.98e-14!605;UBERON:0005423!4.98e-14!605;UBERON:0000923!7.25e-14!604;UBERON:0005291!7.25e-14!604;UBERON:0006598!7.25e-14!604;UBERON:0002532!7.25e-14!604;UBERON:0004121!7.46e-14!169;UBERON:0000475!7.88e-14!365;UBERON:0000468!1.71e-13!659;UBERON:0002020!3.55e-13!34;UBERON:0003528!3.55e-13!34;UBERON:0000483!4.17e-13!309;UBERON:0001893!4.35e-13!34;UBERON:0000119!7.82e-13!312;UBERON:0000924!8.35e-13!173;UBERON:0006601!8.35e-13!173;UBERON:0002791!1.38e-12!33;UBERON:0001869!9.09e-12!32;UBERON:0003056!1.78e-11!61;UBERON:0000956!2.67e-08!25;UBERON:0000203!2.67e-08!25;UBERON:0002619!1.02e-07!22;UBERON:0003076!5.72e-07!15;UBERON:0003057!5.72e-07!15;UBERON:0005172!6.92e-07!55;UBERON:0005173!6.92e-07!55;UBERON:0002308!8.45e-07!9;UBERON:0000125!8.45e-07!9;UBERON:0000064!9.33e-07!219 | |ontology_enrichment_uberon=UBERON:0001049!2.40e-20!57;UBERON:0005068!2.40e-20!57;UBERON:0006241!2.40e-20!57;UBERON:0007135!2.40e-20!57;UBERON:0004111!4.97e-20!241;UBERON:0005743!1.04e-19!86;UBERON:0000477!5.73e-19!286;UBERON:0000955!1.28e-18!69;UBERON:0006238!1.28e-18!69;UBERON:0001017!1.79e-18!82;UBERON:0000073!4.43e-18!94;UBERON:0001016!4.43e-18!94;UBERON:0002616!5.75e-18!59;UBERON:0003075!8.47e-18!86;UBERON:0007284!8.47e-18!86;UBERON:0007023!1.37e-17!115;UBERON:0000033!6.69e-17!123;UBERON:0000025!1.39e-16!194;UBERON:0000481!3.24e-16!347;UBERON:0002346!6.36e-16!90;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0000153!1.86e-15!129;UBERON:0007811!1.86e-15!129;UBERON:0000480!8.45e-15!626;UBERON:0003080!1.15e-14!42;UBERON:0000922!1.17e-14!612;UBERON:0000467!1.52e-14!625;UBERON:0000062!1.55e-14!511;UBERON:0002050!4.98e-14!605;UBERON:0005423!4.98e-14!605;UBERON:0000923!7.25e-14!604;UBERON:0005291!7.25e-14!604;UBERON:0006598!7.25e-14!604;UBERON:0002532!7.25e-14!604;UBERON:0004121!7.46e-14!169;UBERON:0000475!7.88e-14!365;UBERON:0000468!1.71e-13!659;UBERON:0002020!3.55e-13!34;UBERON:0003528!3.55e-13!34;UBERON:0000483!4.17e-13!309;UBERON:0001893!4.35e-13!34;UBERON:0000119!7.82e-13!312;UBERON:0000924!8.35e-13!173;UBERON:0006601!8.35e-13!173;UBERON:0002791!1.38e-12!33;UBERON:0001869!9.09e-12!32;UBERON:0003056!1.78e-11!61;UBERON:0000956!2.67e-08!25;UBERON:0000203!2.67e-08!25;UBERON:0002619!1.02e-07!22;UBERON:0003076!5.72e-07!15;UBERON:0003057!5.72e-07!15;UBERON:0005172!6.92e-07!55;UBERON:0005173!6.92e-07!55;UBERON:0002308!8.45e-07!9;UBERON:0000125!8.45e-07!9;UBERON:0000064!9.33e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-26;34!UBERON:0003528;1.98e-25;34!UBERON:0002020;1.98e-25;34!UBERON:0002791;1.29e-24;32!UBERON:0002780;2.03e-24;41!UBERON:0001890;2.03e-24;41!UBERON:0001869;2.94e-24;32!UBERON:0000073;5.00e-22;53!UBERON:0002616;5.00e-22;53!UBERON:0002619;1.52e-21;22!UBERON:0000956;1.25e-20;25!UBERON:0000203;1.25e-20;25!UBERON:0001950;2.73e-18;20!UBERON:0000955;3.95e-13;68!UBERON:0001017;2.45e-12;75!UBERON:0000125;2.62e-12;9!UBERON:0002308;2.62e-12;9!UBERON:0002298;2.63e-12;6!UBERON:0001016;9.86e-10;83!UBERON:0007023;1.88e-09;114!UBERON:0002420;2.63e-09;9!UBERON:0007245;2.63e-09;9!UBERON:0010009;2.63e-09;9!UBERON:0010011;2.63e-09;9!UBERON:0000454;2.63e-09;9!UBERON:0009663;6.38e-09;7!UBERON:0002107;1.45e-07;19!UBERON:0006925;1.45e-07;19!UBERON:0001896;4.07e-07;3!UBERON:0005290;4.07e-07;3!UBERON:0000200;4.87e-07;6!UBERON:0004732;7.44e-07;13!UBERON:0000988;7.72e-07;3 | |||
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| ||
|short_description=p2@SHROOM1 | |short_description=p2@SHROOM1 | ||
}} | }} |
Latest revision as of 06:24, 20 September 2015
Short description: | p2@SHROOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHROOM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378679, NM_001172700, uc003kxx.2_5end |
EntrezGene: | SHROOM1 |
HGNC: | 24084 |
UniProt: | Q2M3G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.13e-08 | 12 |
mast cell | 9.84e-07 | 5 |
basophil mast progenitor cell | 9.84e-07 | 5 |