FFCP PHASE1:Hg19::chr17:42984002..42984013,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:42984002..42984013,-
|short_description=p30@GFAP
|description=CAGE_peak_30_at_GFAP_5end
|association_with_transcript=-131bp_to_U92979_5end
|EntrezGene=26...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-131bp_to_U92979_5end | |||
|cluster_id=chr17:42984002..42984013,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_30_at_GFAP_5end | |||
|id=chr17:42984002..42984013,- | |||
|ontology_enrichment_celltype=CL:0002605!5.02e-13!3;CL:0000128!1.83e-09!7;CL:0000126!1.83e-09!7;CL:0000127!1.83e-09!7;CL:0002453!1.83e-09!7;CL:0002319!6.07e-08!25;CL:0000047!1.28e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;7.69e-22;3!CL:0000128;1.11e-09;7!CL:0000126;1.11e-09;7!CL:0000127;1.11e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.66e-22,3;CL:0000128,9.00e-10,7;CL:0000126,9.00e-10,7;CL:0000127,9.00e-10,7;CL:0002453,9.00e-10,7 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p30@GFAP | |||
}} | }} |
Latest revision as of 23:12, 24 September 2015
Short description: | p30@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -131bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.66e-22 | 3 |
oligodendrocyte | 9.00e-10 | 7 |
macroglial cell | 9.00e-10 | 7 |
astrocyte | 9.00e-10 | 7 |
oligodendrocyte precursor cell | 9.00e-10 | 7 |