FFCP PHASE1:Hg19::chr5:71403323..71403340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4131 | |EntrezGene=4131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6836 | |HGNC=6836 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA32 | |UniProt=D6RA32 | ||
|association_with_transcript=10bp_to_ENST00000511641_5end | |association_with_transcript=10bp_to_ENST00000511641_5end | ||
|cluster_id=chr5:71403323..71403340,+ | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_3_at_MAP1B_5end | |description=CAGE_peak_3_at_MAP1B_5end | ||
|id=chr5:71403323..71403340,+ | |id=chr5:71403323..71403340,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.23e-26!180;CL:0000057!8.11e-13!75;CL:0000393!2.54e-11!60;CL:0000211!2.54e-11!60;CL:0000222!1.18e-10!119;CL:0000680!3.75e-10!57;CL:0000056!3.75e-10!57;CL:0000355!3.75e-10!57;CL:0000359!1.02e-09!32;CL:0000187!1.95e-09!54;CL:0000183!1.18e-08!59;CL:0000192!4.77e-08!42;CL:0000514!4.77e-08!42;CL:0002319!7.23e-08!25;CL:0002321!7.82e-08!248;CL:0000220!1.43e-07!246;CL:0000133!2.08e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.23e-26!180;CL:0000057!8.11e-13!75;CL:0000393!2.54e-11!60;CL:0000211!2.54e-11!60;CL:0000222!1.18e-10!119;CL:0000680!3.75e-10!57;CL:0000056!3.75e-10!57;CL:0000355!3.75e-10!57;CL:0000359!1.02e-09!32;CL:0000187!1.95e-09!54;CL:0000183!1.18e-08!59;CL:0000192!4.77e-08!42;CL:0000514!4.77e-08!42;CL:0002319!7.23e-08!25;CL:0002321!7.82e-08!248;CL:0000220!1.43e-07!246;CL:0000133!2.08e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.57e-09;32!CL:0002319;5.39e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-13,76;CL:0000393,1.04e-11,61;CL:0000211,1.04e-11,61;CL:0000222,6.08e-11,121;CL:0000680,1.65e-10,58;CL:0000056,1.65e-10,58;CL:0000355,1.65e-10,58;CL:0000359,6.04e-10,32;CL:0000187,8.98e-10,55;CL:0000192,2.43e-08,43;CL:0000514,2.43e-08,43;CL:0002319,4.82e-08,25;CL:0002321,2.78e-07,250;CL:0000133,4.54e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.41e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.13e-38!94;UBERON:0001016!6.13e-38!94;UBERON:0005743!2.93e-37!86;UBERON:0001017!8.61e-37!82;UBERON:0000955!1.38e-30!69;UBERON:0006238!1.38e-30!69;UBERON:0001049!3.70e-29!57;UBERON:0005068!3.70e-29!57;UBERON:0006241!3.70e-29!57;UBERON:0007135!3.70e-29!57;UBERON:0000475!4.28e-29!365;UBERON:0003075!1.26e-28!86;UBERON:0007284!1.26e-28!86;UBERON:0000025!5.78e-28!194;UBERON:0002346!1.20e-26!90;UBERON:0002616!1.99e-26!59;UBERON:0004121!4.18e-25!169;UBERON:0000483!1.67e-24!309;UBERON:0000119!2.54e-24!312;UBERON:0000924!4.93e-24!173;UBERON:0006601!4.93e-24!173;UBERON:0002780!1.40e-23!41;UBERON:0001890!1.40e-23!41;UBERON:0006240!1.40e-23!41;UBERON:0000033!1.64e-23!123;UBERON:0003080!3.72e-23!42;UBERON:0004111!5.88e-23!241;UBERON:0003056!3.79e-22!61;UBERON:0000153!8.26e-21!129;UBERON:0007811!8.26e-21!129;UBERON:0002020!2.04e-20!34;UBERON:0003528!2.04e-20!34;UBERON:0001893!4.94e-20!34;UBERON:0001869!8.10e-20!32;UBERON:0000477!8.84e-20!286;UBERON:0002791!2.23e-19!33;UBERON:0000481!2.22e-16!347;UBERON:0000956!2.32e-16!25;UBERON:0000203!2.32e-16!25;UBERON:0000468!2.07e-15!659;UBERON:0002619!3.30e-15!22;UBERON:0001950!5.16e-14!20;UBERON:0000467!2.11e-12!625;UBERON:0004872!3.17e-12!84;UBERON:0000480!3.84e-12!626;UBERON:0007023!4.27e-12!115;UBERON:0001981!1.15e-11!60;UBERON:0007500!1.15e-11!60;UBERON:0004537!1.15e-11!60;UBERON:0006965!1.15e-11!60;UBERON:0001637!3.00e-11!42;UBERON:0003509!3.00e-11!42;UBERON:0004572!3.00e-11!42;UBERON:0002049!7.26e-11!79;UBERON:0007798!7.26e-11!79;UBERON:0000922!7.49e-11!612;UBERON:0000914!1.27e-10!83;UBERON:0002329!1.27e-10!83;UBERON:0003077!1.27e-10!83;UBERON:0003059!1.27e-10!83;UBERON:0007282!1.27e-10!83;UBERON:0009618!1.27e-10!83;UBERON:0007285!1.27e-10!83;UBERON:0004573!5.88e-10!33;UBERON:0004571!5.88e-10!33;UBERON:0000055!1.10e-09!69;UBERON:0000923!1.32e-09!604;UBERON:0005291!1.32e-09!604;UBERON:0006598!1.32e-09!604;UBERON:0002532!1.32e-09!604;UBERON:0002050!1.41e-09!605;UBERON:0005423!1.41e-09!605;UBERON:0002385!2.47e-09!63;UBERON:0001015!2.47e-09!63;UBERON:0000383!2.47e-09!63;UBERON:0004290!2.77e-09!70;UBERON:0001134!3.15e-09!61;UBERON:0002036!3.15e-09!61;UBERON:0003082!3.15e-09!61;UBERON:0000064!1.34e-08!219;UBERON:0004535!4.82e-08!110;UBERON:0001009!6.78e-08!113;UBERON:0000486!9.49e-08!82;UBERON:0003914!2.90e-07!118;UBERON:0003076!3.20e-07!15;UBERON:0003057!3.20e-07!15;UBERON:0000947!8.09e-07!21;UBERON:0010191!8.09e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!6.13e-38!94;UBERON:0001016!6.13e-38!94;UBERON:0005743!2.93e-37!86;UBERON:0001017!8.61e-37!82;UBERON:0000955!1.38e-30!69;UBERON:0006238!1.38e-30!69;UBERON:0001049!3.70e-29!57;UBERON:0005068!3.70e-29!57;UBERON:0006241!3.70e-29!57;UBERON:0007135!3.70e-29!57;UBERON:0000475!4.28e-29!365;UBERON:0003075!1.26e-28!86;UBERON:0007284!1.26e-28!86;UBERON:0000025!5.78e-28!194;UBERON:0002346!1.20e-26!90;UBERON:0002616!1.99e-26!59;UBERON:0004121!4.18e-25!169;UBERON:0000483!1.67e-24!309;UBERON:0000119!2.54e-24!312;UBERON:0000924!4.93e-24!173;UBERON:0006601!4.93e-24!173;UBERON:0002780!1.40e-23!41;UBERON:0001890!1.40e-23!41;UBERON:0006240!1.40e-23!41;UBERON:0000033!1.64e-23!123;UBERON:0003080!3.72e-23!42;UBERON:0004111!5.88e-23!241;UBERON:0003056!3.79e-22!61;UBERON:0000153!8.26e-21!129;UBERON:0007811!8.26e-21!129;UBERON:0002020!2.04e-20!34;UBERON:0003528!2.04e-20!34;UBERON:0001893!4.94e-20!34;UBERON:0001869!8.10e-20!32;UBERON:0000477!8.84e-20!286;UBERON:0002791!2.23e-19!33;UBERON:0000481!2.22e-16!347;UBERON:0000956!2.32e-16!25;UBERON:0000203!2.32e-16!25;UBERON:0000468!2.07e-15!659;UBERON:0002619!3.30e-15!22;UBERON:0001950!5.16e-14!20;UBERON:0000467!2.11e-12!625;UBERON:0004872!3.17e-12!84;UBERON:0000480!3.84e-12!626;UBERON:0007023!4.27e-12!115;UBERON:0001981!1.15e-11!60;UBERON:0007500!1.15e-11!60;UBERON:0004537!1.15e-11!60;UBERON:0006965!1.15e-11!60;UBERON:0001637!3.00e-11!42;UBERON:0003509!3.00e-11!42;UBERON:0004572!3.00e-11!42;UBERON:0002049!7.26e-11!79;UBERON:0007798!7.26e-11!79;UBERON:0000922!7.49e-11!612;UBERON:0000914!1.27e-10!83;UBERON:0002329!1.27e-10!83;UBERON:0003077!1.27e-10!83;UBERON:0003059!1.27e-10!83;UBERON:0007282!1.27e-10!83;UBERON:0009618!1.27e-10!83;UBERON:0007285!1.27e-10!83;UBERON:0004573!5.88e-10!33;UBERON:0004571!5.88e-10!33;UBERON:0000055!1.10e-09!69;UBERON:0000923!1.32e-09!604;UBERON:0005291!1.32e-09!604;UBERON:0006598!1.32e-09!604;UBERON:0002532!1.32e-09!604;UBERON:0002050!1.41e-09!605;UBERON:0005423!1.41e-09!605;UBERON:0002385!2.47e-09!63;UBERON:0001015!2.47e-09!63;UBERON:0000383!2.47e-09!63;UBERON:0004290!2.77e-09!70;UBERON:0001134!3.15e-09!61;UBERON:0002036!3.15e-09!61;UBERON:0003082!3.15e-09!61;UBERON:0000064!1.34e-08!219;UBERON:0004535!4.82e-08!110;UBERON:0001009!6.78e-08!113;UBERON:0000486!9.49e-08!82;UBERON:0003914!2.90e-07!118;UBERON:0003076!3.20e-07!15;UBERON:0003057!3.20e-07!15;UBERON:0000947!8.09e-07!21;UBERON:0010191!8.09e-07!21 | ||
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| ||
|short_description=p3@MAP1B | |short_description=p3@MAP1B | ||
}} | }} |
Latest revision as of 13:43, 18 September 2015
Short description: | p3@MAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP1B_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 10bp_to_ENST00000511641_5end |
EntrezGene: | MAP1B |
HGNC: | 6836 |
UniProt: | D6RA32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-13 | 76 |
electrically responsive cell | 1.04e-11 | 61 |
electrically active cell | 1.04e-11 | 61 |
mesodermal cell | 6.08e-11 | 121 |
muscle precursor cell | 1.65e-10 | 58 |
myoblast | 1.65e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-10 | 58 |
vascular associated smooth muscle cell | 6.04e-10 | 32 |
muscle cell | 8.98e-10 | 55 |
smooth muscle cell | 2.43e-08 | 43 |
smooth muscle myoblast | 2.43e-08 | 43 |
neural cell | 4.82e-08 | 25 |
embryonic cell | 2.78e-07 | 250 |
neurectodermal cell | 4.54e-07 | 59 |