FFCP PHASE1:Hg19::chr1:50489547..50489616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84871 | |EntrezGene=84871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25892 | |HGNC=25892 | ||
|TSSclassifier=strong | |||
|UniProt=B1ANV5,B1AMW3,Q5VU57 | |UniProt=B1ANV5,B1AMW3,Q5VU57 | ||
|association_with_transcript=0bp_to_ENST00000371836,ENST00000371838,ENST00000371839_5end | |association_with_transcript=0bp_to_ENST00000371836,ENST00000371838,ENST00000371839_5end | ||
|cluster_id=chr1:50489547..50489616,- | |||
|coexpression_cluster_id=C624 | |coexpression_cluster_id=C624 | ||
|description=CAGE_peak_1_at_AGBL4_5end | |description=CAGE_peak_1_at_AGBL4_5end | ||
|id=chr1:50489547..50489616,- | |id=chr1:50489547..50489616,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.32e-18;82!UBERON:0002532;2.06e-07;206!UBERON:0010316;2.06e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-61!115;UBERON:0001049!1.19e-55!57;UBERON:0005068!1.19e-55!57;UBERON:0006241!1.19e-55!57;UBERON:0007135!1.19e-55!57;UBERON:0001017!4.30e-51!82;UBERON:0000073!1.79e-49!94;UBERON:0001016!1.79e-49!94;UBERON:0005743!2.24e-49!86;UBERON:0002616!9.44e-47!59;UBERON:0003075!2.48e-46!86;UBERON:0007284!2.48e-46!86;UBERON:0002346!3.04e-46!90;UBERON:0000955!9.83e-45!69;UBERON:0006238!9.83e-45!69;UBERON:0003080!1.46e-42!42;UBERON:0002780!5.37e-42!41;UBERON:0001890!5.37e-42!41;UBERON:0006240!5.37e-42!41;UBERON:0001893!1.32e-34!34;UBERON:0002020!1.84e-34!34;UBERON:0003528!1.84e-34!34;UBERON:0002791!2.10e-33!33;UBERON:0001869!4.91e-33!32;UBERON:0003056!2.05e-32!61;UBERON:0000924!2.01e-27!173;UBERON:0006601!2.01e-27!173;UBERON:0004121!6.69e-27!169;UBERON:0002619!1.63e-26!22;UBERON:0000956!8.71e-26!25;UBERON:0000203!8.71e-26!25;UBERON:0000153!4.95e-25!129;UBERON:0007811!4.95e-25!129;UBERON:0000033!2.31e-24!123;UBERON:0001950!2.39e-24!20;UBERON:0000025!1.98e-14!194;UBERON:0003076!9.56e-14!15;UBERON:0003057!9.56e-14!15;UBERON:0004732!4.81e-12!13;UBERON:0004733!2.17e-11!12;UBERON:0002028!2.17e-11!12;UBERON:0007277!2.17e-11!12;UBERON:0004111!1.17e-10!241;UBERON:0002420!3.40e-10!9;UBERON:0007245!3.40e-10!9;UBERON:0010009!3.40e-10!9;UBERON:0010011!3.40e-10!9;UBERON:0000454!3.40e-10!9;UBERON:0000483!3.89e-10!309;UBERON:0000064!4.12e-10!219;UBERON:0002308!4.93e-10!9;UBERON:0000125!4.93e-10!9;UBERON:0001871!5.26e-10!7;UBERON:0000119!8.82e-10!312;UBERON:0000477!4.01e-09!286;UBERON:0000481!7.65e-09!347;UBERON:0002298!1.01e-08!8;UBERON:0001894!1.08e-08!7;UBERON:0006222!1.08e-08!7;UBERON:0000475!1.34e-08!365;UBERON:0000922!1.82e-08!612;UBERON:0000062!2.16e-08!511;UBERON:0002680!2.26e-08!9;UBERON:0001895!2.26e-08!9;UBERON:0010092!2.26e-08!9;UBERON:0000200!2.31e-08!6;UBERON:0009663!4.39e-08!7;UBERON:0002050!1.55e-07!605;UBERON:0005423!1.55e-07!605;UBERON:0000923!3.20e-07!604;UBERON:0005291!3.20e-07!604;UBERON:0006598!3.20e-07!604;UBERON:0002532!3.20e-07!604;UBERON:0000468!3.23e-07!659;UBERON:0001872!4.20e-07!5;UBERON:0000349!5.19e-07!5;UBERON:0002021!5.32e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-61!115;UBERON:0001049!1.19e-55!57;UBERON:0005068!1.19e-55!57;UBERON:0006241!1.19e-55!57;UBERON:0007135!1.19e-55!57;UBERON:0001017!4.30e-51!82;UBERON:0000073!1.79e-49!94;UBERON:0001016!1.79e-49!94;UBERON:0005743!2.24e-49!86;UBERON:0002616!9.44e-47!59;UBERON:0003075!2.48e-46!86;UBERON:0007284!2.48e-46!86;UBERON:0002346!3.04e-46!90;UBERON:0000955!9.83e-45!69;UBERON:0006238!9.83e-45!69;UBERON:0003080!1.46e-42!42;UBERON:0002780!5.37e-42!41;UBERON:0001890!5.37e-42!41;UBERON:0006240!5.37e-42!41;UBERON:0001893!1.32e-34!34;UBERON:0002020!1.84e-34!34;UBERON:0003528!1.84e-34!34;UBERON:0002791!2.10e-33!33;UBERON:0001869!4.91e-33!32;UBERON:0003056!2.05e-32!61;UBERON:0000924!2.01e-27!173;UBERON:0006601!2.01e-27!173;UBERON:0004121!6.69e-27!169;UBERON:0002619!1.63e-26!22;UBERON:0000956!8.71e-26!25;UBERON:0000203!8.71e-26!25;UBERON:0000153!4.95e-25!129;UBERON:0007811!4.95e-25!129;UBERON:0000033!2.31e-24!123;UBERON:0001950!2.39e-24!20;UBERON:0000025!1.98e-14!194;UBERON:0003076!9.56e-14!15;UBERON:0003057!9.56e-14!15;UBERON:0004732!4.81e-12!13;UBERON:0004733!2.17e-11!12;UBERON:0002028!2.17e-11!12;UBERON:0007277!2.17e-11!12;UBERON:0004111!1.17e-10!241;UBERON:0002420!3.40e-10!9;UBERON:0007245!3.40e-10!9;UBERON:0010009!3.40e-10!9;UBERON:0010011!3.40e-10!9;UBERON:0000454!3.40e-10!9;UBERON:0000483!3.89e-10!309;UBERON:0000064!4.12e-10!219;UBERON:0002308!4.93e-10!9;UBERON:0000125!4.93e-10!9;UBERON:0001871!5.26e-10!7;UBERON:0000119!8.82e-10!312;UBERON:0000477!4.01e-09!286;UBERON:0000481!7.65e-09!347;UBERON:0002298!1.01e-08!8;UBERON:0001894!1.08e-08!7;UBERON:0006222!1.08e-08!7;UBERON:0000475!1.34e-08!365;UBERON:0000922!1.82e-08!612;UBERON:0000062!2.16e-08!511;UBERON:0002680!2.26e-08!9;UBERON:0001895!2.26e-08!9;UBERON:0010092!2.26e-08!9;UBERON:0000200!2.31e-08!6;UBERON:0009663!4.39e-08!7;UBERON:0002050!1.55e-07!605;UBERON:0005423!1.55e-07!605;UBERON:0000923!3.20e-07!604;UBERON:0005291!3.20e-07!604;UBERON:0006598!3.20e-07!604;UBERON:0002532!3.20e-07!604;UBERON:0000468!3.23e-07!659;UBERON:0001872!4.20e-07!5;UBERON:0000349!5.19e-07!5;UBERON:0002021!5.32e-07!5 | ||
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| ||
|short_description=p1@AGBL4 | |short_description=p1@AGBL4 | ||
}} | }} |
Latest revision as of 10:43, 18 September 2015
Short description: | p1@AGBL4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGBL4_5end |
Coexpression cluster: | C624_pituitary_cerebellum_occipital_parietal_middle_medial_hippocampus |
Association with transcript: | 0bp_to_ENST00000371836, ENST00000371838, ENST00000371839_5end |
EntrezGene: | AGBL4 |
HGNC: | 25892 |
UniProt: | B1ANV5B1AMW3Q5VU57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data