FFCP PHASE1:Hg19::chr21:34442439..34442455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116448 | |EntrezGene=116448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16983 | |HGNC=16983 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAK6 | |UniProt=Q8TAK6 | ||
|association_with_transcript=0bp_to_ENST00000333063,ENST00000382348,NM_138983,uc002yqz.2_5end | |association_with_transcript=0bp_to_ENST00000333063,ENST00000382348,NM_138983,uc002yqz.2_5end | ||
|cluster_id=chr21:34442439..34442455,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_OLIG1_5end | |description=CAGE_peak_1_at_OLIG1_5end | ||
|id=chr21:34442439..34442455,+ | |id=chr21:34442439..34442455,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.25e-33!42;CL:0000860!6.15e-30!45;CL:0000766!7.97e-28!76;CL:0002194!9.97e-28!63;CL:0000576!9.97e-28!63;CL:0000040!9.97e-28!63;CL:0000559!9.97e-28!63;CL:0002009!2.98e-27!65;CL:0000763!2.53e-26!112;CL:0000049!2.53e-26!112;CL:0000839!3.42e-25!70;CL:0000557!2.96e-23!71;CL:0000037!5.06e-18!172;CL:0000566!5.06e-18!172;CL:0002032!2.76e-17!165;CL:0000837!2.76e-17!165;CL:0002087!1.09e-15!119;CL:0000988!1.76e-15!182;CL:0000738!3.06e-15!140;CL:0002031!6.13e-14!124;CL:0002393!4.28e-07!9;CL:0002397!4.28e-07!9 | |ontology_enrichment_celltype=CL:0002057!2.25e-33!42;CL:0000860!6.15e-30!45;CL:0000766!7.97e-28!76;CL:0002194!9.97e-28!63;CL:0000576!9.97e-28!63;CL:0000040!9.97e-28!63;CL:0000559!9.97e-28!63;CL:0002009!2.98e-27!65;CL:0000763!2.53e-26!112;CL:0000049!2.53e-26!112;CL:0000839!3.42e-25!70;CL:0000557!2.96e-23!71;CL:0000037!5.06e-18!172;CL:0000566!5.06e-18!172;CL:0002032!2.76e-17!165;CL:0000837!2.76e-17!165;CL:0002087!1.09e-15!119;CL:0000988!1.76e-15!182;CL:0000738!3.06e-15!140;CL:0002031!6.13e-14!124;CL:0002393!4.28e-07!9;CL:0002397!4.28e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-33;33!CL:0002057;1.41e-33;33!CL:0000576;1.18e-28;48!CL:0000473;4.23e-26;39!CL:0000234;4.23e-26;39!CL:0000766;1.55e-20;69!CL:0000763;7.05e-12;100!CL:0002087;2.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-44,42;CL:0002057,2.03e-44,42;CL:0000473,2.76e-42,48;CL:0000234,2.76e-42,48;CL:0000766,2.83e-39,72;CL:0002194,1.71e-38,59;CL:0000576,1.71e-38,59;CL:0000040,1.71e-38,59;CL:0000559,1.71e-38,59;CL:0002009,1.08e-36,61;CL:0000839,1.59e-35,66;CL:0000763,3.96e-33,108;CL:0000049,3.96e-33,108;CL:0000557,6.06e-32,67;CL:0000037,1.76e-19,168;CL:0002032,6.98e-19,161;CL:0000837,6.98e-19,161;CL:0000738,2.92e-18,136;CL:0002087,3.21e-18,115;CL:0000988,2.06e-17,177;CL:0002031,7.55e-16,120;CL:0002393,5.21e-09,9;CL:0002397,5.21e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.67e-32;42!CL:0000049;8.40e-11;108!UBERON:0006601;6.41e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-44!115;UBERON:0001049!1.62e-42!57;UBERON:0005068!1.62e-42!57;UBERON:0006241!1.62e-42!57;UBERON:0007135!1.62e-42!57;UBERON:0001017!1.66e-38!82;UBERON:0005743!1.42e-36!86;UBERON:0002616!2.49e-34!59;UBERON:0000073!4.17e-32!94;UBERON:0001016!4.17e-32!94;UBERON:0003080!4.90e-32!42;UBERON:0002780!1.09e-31!41;UBERON:0001890!1.09e-31!41;UBERON:0006240!1.09e-31!41;UBERON:0000955!1.27e-31!69;UBERON:0006238!1.27e-31!69;UBERON:0001893!8.90e-30!34;UBERON:0002020!9.60e-30!34;UBERON:0003528!9.60e-30!34;UBERON:0002791!7.90e-29!33;UBERON:0001869!9.70e-28!32;UBERON:0003075!1.56e-26!86;UBERON:0007284!1.56e-26!86;UBERON:0002390!1.45e-24!102;UBERON:0003061!1.45e-24!102;UBERON:0002346!2.57e-24!90;UBERON:0002193!1.11e-21!112;UBERON:0000956!3.41e-21!25;UBERON:0000203!3.41e-21!25;UBERON:0002619!5.44e-20!22;UBERON:0003056!1.01e-19!61;UBERON:0002371!2.93e-19!80;UBERON:0001950!4.81e-18!20;UBERON:0001474!2.80e-17!86;UBERON:0000153!1.05e-14!129;UBERON:0007811!1.05e-14!129;UBERON:0000033!5.17e-14!123;UBERON:0004765!6.90e-13!101;UBERON:0001434!6.90e-13!101;UBERON:0004121!5.20e-12!169;UBERON:0002405!1.05e-11!115;UBERON:0003076!2.36e-11!15;UBERON:0003057!2.36e-11!15;UBERON:0000924!3.29e-11!173;UBERON:0006601!3.29e-11!173;UBERON:0002308!5.17e-10!9;UBERON:0000125!5.17e-10!9;UBERON:0002420!5.96e-10!9;UBERON:0007245!5.96e-10!9;UBERON:0010009!5.96e-10!9;UBERON:0010011!5.96e-10!9;UBERON:0000454!5.96e-10!9;UBERON:0004732!1.37e-09!13;UBERON:0004733!1.35e-08!12;UBERON:0002028!1.35e-08!12;UBERON:0007277!1.35e-08!12;UBERON:0002298!1.81e-08!8;UBERON:0009663!4.30e-08!7;UBERON:0000200!5.24e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!2.53e-44!115;UBERON:0001049!1.62e-42!57;UBERON:0005068!1.62e-42!57;UBERON:0006241!1.62e-42!57;UBERON:0007135!1.62e-42!57;UBERON:0001017!1.66e-38!82;UBERON:0005743!1.42e-36!86;UBERON:0002616!2.49e-34!59;UBERON:0000073!4.17e-32!94;UBERON:0001016!4.17e-32!94;UBERON:0003080!4.90e-32!42;UBERON:0002780!1.09e-31!41;UBERON:0001890!1.09e-31!41;UBERON:0006240!1.09e-31!41;UBERON:0000955!1.27e-31!69;UBERON:0006238!1.27e-31!69;UBERON:0001893!8.90e-30!34;UBERON:0002020!9.60e-30!34;UBERON:0003528!9.60e-30!34;UBERON:0002791!7.90e-29!33;UBERON:0001869!9.70e-28!32;UBERON:0003075!1.56e-26!86;UBERON:0007284!1.56e-26!86;UBERON:0002390!1.45e-24!102;UBERON:0003061!1.45e-24!102;UBERON:0002346!2.57e-24!90;UBERON:0002193!1.11e-21!112;UBERON:0000956!3.41e-21!25;UBERON:0000203!3.41e-21!25;UBERON:0002619!5.44e-20!22;UBERON:0003056!1.01e-19!61;UBERON:0002371!2.93e-19!80;UBERON:0001950!4.81e-18!20;UBERON:0001474!2.80e-17!86;UBERON:0000153!1.05e-14!129;UBERON:0007811!1.05e-14!129;UBERON:0000033!5.17e-14!123;UBERON:0004765!6.90e-13!101;UBERON:0001434!6.90e-13!101;UBERON:0004121!5.20e-12!169;UBERON:0002405!1.05e-11!115;UBERON:0003076!2.36e-11!15;UBERON:0003057!2.36e-11!15;UBERON:0000924!3.29e-11!173;UBERON:0006601!3.29e-11!173;UBERON:0002308!5.17e-10!9;UBERON:0000125!5.17e-10!9;UBERON:0002420!5.96e-10!9;UBERON:0007245!5.96e-10!9;UBERON:0010009!5.96e-10!9;UBERON:0010011!5.96e-10!9;UBERON:0000454!5.96e-10!9;UBERON:0004732!1.37e-09!13;UBERON:0004733!1.35e-08!12;UBERON:0002028!1.35e-08!12;UBERON:0007277!1.35e-08!12;UBERON:0002298!1.81e-08!8;UBERON:0009663!4.30e-08!7;UBERON:0000200!5.24e-07!6 | ||
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| ||
|short_description=p1@OLIG1 | |short_description=p1@OLIG1 | ||
}} | }} |
Latest revision as of 03:52, 18 September 2015
Short description: | p1@OLIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OLIG1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000333063, ENST00000382348, NM_138983, uc002yqz.2_5end |
EntrezGene: | OLIG1 |
HGNC: | 16983 |
UniProt: | Q8TAK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.03e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-44 | 42 |
defensive cell | 2.76e-42 | 48 |
phagocyte | 2.76e-42 | 48 |
myeloid leukocyte | 2.83e-39 | 72 |
monopoietic cell | 1.71e-38 | 59 |
monocyte | 1.71e-38 | 59 |
monoblast | 1.71e-38 | 59 |
promonocyte | 1.71e-38 | 59 |
macrophage dendritic cell progenitor | 1.08e-36 | 61 |
myeloid lineage restricted progenitor cell | 1.59e-35 | 66 |
myeloid cell | 3.96e-33 | 108 |
common myeloid progenitor | 3.96e-33 | 108 |
granulocyte monocyte progenitor cell | 6.06e-32 | 67 |
hematopoietic stem cell | 1.76e-19 | 168 |
hematopoietic oligopotent progenitor cell | 6.98e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.98e-19 | 161 |
leukocyte | 2.92e-18 | 136 |
nongranular leukocyte | 3.21e-18 | 115 |
hematopoietic cell | 2.06e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 7.55e-16 | 120 |
intermediate monocyte | 5.21e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.21e-09 | 9 |