FFCP PHASE1:Hg19::chr19:45449301..45449313,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:45449301..45449313,+
|short_description=p1@APOC2
|description=CAGE_peak_1_at_APOC2_5end
|association_with_transcript=58bp_to_ENST00000252490,uc002pah.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344 | |EntrezGene=344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=609 | |HGNC=609 | ||
|TSSclassifier=strong | |||
|UniProt=P02655 | |UniProt=P02655 | ||
|association_with_transcript=58bp_to_ENST00000252490,uc002pah.2_5end | |||
|cluster_id=chr19:45449301..45449313,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_APOC2_5end | |||
|id=chr19:45449301..45449313,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.79e-12!112;CL:0000049!3.79e-12!112;CL:0000990!1.05e-08!8;CL:0000181!1.25e-07!12;CL:0000417!1.25e-07!12;CL:0000668!1.25e-07!12;CL:0000414!1.25e-07!12;CL:0000412!1.25e-07!12;CL:0000182!1.25e-07!12;CL:0000453!2.49e-07!5;CL:0000557!3.92e-07!71;CL:0000451!9.67e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000990;2.48e-11;8!CL:0000235;1.53e-10;6!CL:0000453;2.68e-09;5!CL:0000451;6.01e-09;10!CL:0000182;1.40e-08;12!CL:0000840;4.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.66e-12,108;CL:0000049,9.66e-12,108;CL:0000990,2.52e-11,8;CL:0000235,1.42e-10,6;CL:0000453,2.64e-09,5;CL:0000451,6.08e-09,10;CL:0000182,1.42e-08,12;CL:0000840,4.94e-07,5;CL:0001029,4.94e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.82e-11;82!UBERON:0004161;3.45e-07;11 | |||
|ontology_enrichment_disease=DOID:8692!3.84e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.63e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.41e-10,31;DOID:1240,1.64e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-50!115;UBERON:0001049!7.45e-44!57;UBERON:0005068!7.45e-44!57;UBERON:0006241!7.45e-44!57;UBERON:0007135!7.45e-44!57;UBERON:0002616!1.50e-35!59;UBERON:0003080!5.86e-35!42;UBERON:0002780!3.66e-34!41;UBERON:0001890!3.66e-34!41;UBERON:0006240!3.66e-34!41;UBERON:0001017!8.35e-34!82;UBERON:0005743!2.05e-32!86;UBERON:0000955!4.67e-32!69;UBERON:0006238!4.67e-32!69;UBERON:0000073!8.80e-29!94;UBERON:0001016!8.80e-29!94;UBERON:0002020!5.63e-28!34;UBERON:0003528!5.63e-28!34;UBERON:0001893!7.42e-28!34;UBERON:0003075!3.26e-27!86;UBERON:0007284!3.26e-27!86;UBERON:0002791!5.18e-27!33;UBERON:0001869!1.14e-25!32;UBERON:0002346!3.53e-25!90;UBERON:0002619!3.61e-22!22;UBERON:0003056!7.13e-21!61;UBERON:0001950!4.27e-20!20;UBERON:0000956!1.11e-18!25;UBERON:0000203!1.11e-18!25;UBERON:0000153!2.68e-15!129;UBERON:0007811!2.68e-15!129;UBERON:0000033!9.17e-15!123;UBERON:0000025!8.96e-12!194;UBERON:0004121!2.63e-11!169;UBERON:0002420!3.83e-11!9;UBERON:0007245!3.83e-11!9;UBERON:0010009!3.83e-11!9;UBERON:0010011!3.83e-11!9;UBERON:0000454!3.83e-11!9;UBERON:0002308!5.30e-11!9;UBERON:0000125!5.30e-11!9;UBERON:0000924!1.21e-10!173;UBERON:0006601!1.21e-10!173;UBERON:0002405!1.98e-10!115;UBERON:0003076!6.04e-10!15;UBERON:0003057!6.04e-10!15;UBERON:0000062!1.46e-09!511;UBERON:0002298!1.61e-09!8;UBERON:0009663!5.65e-09!7;UBERON:0001871!5.91e-09!7;UBERON:0005057!2.30e-08!26;UBERON:0004111!4.15e-08!241;UBERON:0004732!8.45e-08!13;UBERON:0001894!1.09e-07!7;UBERON:0006222!1.09e-07!7;UBERON:0002107!1.19e-07!19;UBERON:0006925!1.19e-07!19;UBERON:0008836!1.19e-07!19;UBERON:0002368!1.51e-07!35;UBERON:0000200!4.78e-07!6;UBERON:0004733!5.98e-07!12;UBERON:0002028!5.98e-07!12;UBERON:0007277!5.98e-07!12;UBERON:0000349!9.58e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.70e-33;41!UBERON:0001890;4.70e-33;41!UBERON:0003528;9.38e-32;34!UBERON:0002020;9.38e-32;34!UBERON:0001893;1.25e-31;34!UBERON:0002791;2.86e-31;32!UBERON:0001869;5.20e-31;32!UBERON:0000073;2.71e-29;53!UBERON:0002616;2.71e-29;53!UBERON:0002619;3.00e-29;22!UBERON:0001950;1.96e-26;20!UBERON:0000956;4.71e-25;25!UBERON:0000203;4.71e-25;25!UBERON:0000955;7.29e-20;68!UBERON:0001017;1.25e-18;75!UBERON:0001016;1.21e-15;83!UBERON:0002420;2.14e-14;9!UBERON:0007245;2.14e-14;9!UBERON:0010009;2.14e-14;9!UBERON:0010011;2.14e-14;9!UBERON:0000454;2.14e-14;9!UBERON:0000125;3.26e-14;9!UBERON:0002308;3.26e-14;9!UBERON:0009663;1.70e-11;7!UBERON:0001871;2.95e-10;6!UBERON:0007023;5.02e-10;114!UBERON:0001894;7.82e-10;7!UBERON:0002298;9.08e-10;6!UBERON:0002107;2.77e-09;19!UBERON:0006925;2.77e-09;19!UBERON:0000200;5.94e-09;6!UBERON:0004732;1.12e-08;13!UBERON:0000349;1.60e-08;5!UBERON:0002368;5.67e-08;33!UBERON:0004733;1.42e-07;12!UBERON:0002028;1.42e-07;12!UBERON:0001872;2.36e-07;5!UBERON:0002021;2.87e-07;5!UBERON:0000369;5.94e-07;4!UBERON:0002435;5.94e-07;4!UBERON:0000204;5.94e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.52e-56,56;UBERON:0005068,3.52e-56,56;UBERON:0006241,3.52e-56,56;UBERON:0007135,3.52e-56,56;UBERON:0000073,1.30e-51,53;UBERON:0002616,1.30e-51,53;UBERON:0002780,6.54e-46,41;UBERON:0001890,6.54e-46,41;UBERON:0003080,6.54e-46,41;UBERON:0006240,6.54e-46,41;UBERON:0001017,1.67e-42,81;UBERON:0000955,2.14e-42,68;UBERON:0006238,2.14e-42,68;UBERON:0001016,2.43e-38,89;UBERON:0003528,1.42e-37,34;UBERON:0002020,1.42e-37,34;UBERON:0001893,2.07e-37,34;UBERON:0003075,3.07e-35,82;UBERON:0007284,3.07e-35,82;UBERON:0002791,8.25e-35,32;UBERON:0001869,1.85e-34,32;UBERON:0002346,6.92e-33,86;UBERON:0007023,1.84e-30,114;UBERON:0002619,3.17e-29,22;UBERON:0003056,8.29e-29,61;UBERON:0001950,1.94e-26,20;UBERON:0010371,4.99e-26,104;UBERON:0000956,4.94e-25,25;UBERON:0000203,4.94e-25,25;UBERON:0011216,1.97e-22,223;UBERON:0010314,3.54e-17,132;UBERON:0000025,2.65e-16,192;UBERON:0002420,2.06e-14,9;UBERON:0007245,2.06e-14,9;UBERON:0010009,2.06e-14,9;UBERON:0010011,2.06e-14,9;UBERON:0000454,2.06e-14,9;UBERON:0000125,3.19e-14,9;UBERON:0002308,3.19e-14,9;UBERON:0004121,1.69e-13,171;UBERON:0000924,1.69e-13,171;UBERON:0006601,1.69e-13,171;UBERON:0009663,1.66e-11,7;UBERON:0003076,2.03e-11,15;UBERON:0003057,2.03e-11,15;UBERON:0001871,2.72e-10,6;UBERON:0004111,2.87e-10,240;UBERON:0001894,8.74e-10,7;UBERON:0006222,8.74e-10,7;UBERON:0002298,9.09e-10,6;UBERON:0002107,2.88e-09,19;UBERON:0006925,2.88e-09,19;UBERON:0008836,2.88e-09,19;UBERON:0000200,6.32e-09,6;UBERON:0004732,1.18e-08,13;UBERON:0000349,1.60e-08,5;UBERON:0002368,5.00e-08,35;UBERON:0008835,1.29e-07,22;UBERON:0003894,1.29e-07,22;UBERON:0004733,1.46e-07,12;UBERON:0002028,1.46e-07,12;UBERON:0007277,1.46e-07,12;UBERON:0001872,2.56e-07,5;UBERON:0002021,3.00e-07,5;UBERON:0009854,3.63e-07,23;UBERON:0000369,5.76e-07,4;UBERON:0002435,5.76e-07,4;UBERON:0000204,5.76e-07,4;UBERON:0010082,5.76e-07,4;UBERON:0000483,8.01e-07,306 | |||
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| ||
|short_description=p1@APOC2 | |||
}} | }} |
Latest revision as of 15:07, 18 September 2015
Short description: | p1@APOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOC2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 58bp_to_ENST00000252490, uc002pah.2_5end |
EntrezGene: | APOC2 |
HGNC: | 609 |
UniProt: | P02655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.66e-12 | 108 |
common myeloid progenitor | 9.66e-12 | 108 |
conventional dendritic cell | 2.52e-11 | 8 |
macrophage | 1.42e-10 | 6 |
Langerhans cell | 2.64e-09 | 5 |
dendritic cell | 6.08e-09 | 10 |
hepatocyte | 1.42e-08 | 12 |
immature conventional dendritic cell | 4.94e-07 | 5 |
common dendritic progenitor | 4.94e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.41e-10 | 31 |
leukemia | 1.64e-07 | 39 |