FFCP PHASE1:Hg19::chr9:139918072..139918094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_uc010nca.2_5end | |association_with_transcript=197bp_to_uc010nca.2_5end | ||
|cluster_id=chr9:139918072..139918094,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_12_at_ABCA2_5end | |description=CAGE_peak_12_at_ABCA2_5end | ||
|id=chr9:139918072..139918094,- | |id=chr9:139918072..139918094,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.62e-12;1!UBERON:0006222;4.22e-11;1!UBERON:0006601;7.69e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.24e-91!57;UBERON:0005068!4.24e-91!57;UBERON:0006241!4.24e-91!57;UBERON:0007135!4.24e-91!57;UBERON:0002616!2.75e-78!59;UBERON:0002780!3.00e-74!41;UBERON:0001890!3.00e-74!41;UBERON:0006240!3.00e-74!41;UBERON:0000955!1.38e-72!69;UBERON:0006238!1.38e-72!69;UBERON:0003080!2.42e-72!42;UBERON:0001017!5.65e-67!82;UBERON:0001893!5.83e-67!34;UBERON:0002020!5.99e-67!34;UBERON:0003528!5.99e-67!34;UBERON:0002791!1.02e-63!33;UBERON:0005743!1.72e-63!86;UBERON:0000073!4.81e-63!94;UBERON:0001016!4.81e-63!94;UBERON:0001869!6.74e-60!32;UBERON:0003075!1.31e-57!86;UBERON:0007284!1.31e-57!86;UBERON:0002346!1.16e-54!90;UBERON:0007023!1.02e-51!115;UBERON:0003056!8.43e-48!61;UBERON:0002619!9.73e-44!22;UBERON:0000033!2.23e-39!123;UBERON:0000956!3.45e-38!25;UBERON:0000203!3.45e-38!25;UBERON:0001950!3.23e-37!20;UBERON:0000153!3.88e-37!129;UBERON:0007811!3.88e-37!129;UBERON:0004121!5.99e-33!169;UBERON:0002308!1.15e-32!9;UBERON:0000125!1.15e-32!9;UBERON:0002420!1.87e-32!9;UBERON:0007245!1.87e-32!9;UBERON:0010009!1.87e-32!9;UBERON:0010011!1.87e-32!9;UBERON:0000454!1.87e-32!9;UBERON:0000924!5.69e-32!173;UBERON:0006601!5.69e-32!173;UBERON:0009663!1.39e-25!7;UBERON:0000025!1.20e-24!194;UBERON:0002298!2.87e-23!8;UBERON:0003076!4.61e-19!15;UBERON:0003057!4.61e-19!15;UBERON:0000349!8.67e-19!5;UBERON:0004111!5.77e-18!241;UBERON:0004732!9.24e-18!13;UBERON:0001871!8.64e-17!7;UBERON:0000200!7.96e-16!6;UBERON:0000477!1.50e-15!286;UBERON:0004733!1.07e-14!12;UBERON:0002028!1.07e-14!12;UBERON:0007277!1.07e-14!12;UBERON:0000369!1.88e-14!4;UBERON:0002435!1.88e-14!4;UBERON:0000204!1.88e-14!4;UBERON:0010082!1.88e-14!4;UBERON:0000483!1.23e-13!309;UBERON:0000119!2.07e-13!312;UBERON:0006331!1.29e-12!3;UBERON:0002021!1.75e-12!5;UBERON:0000988!2.05e-12!3;UBERON:0000475!2.09e-12!365;UBERON:0002771!2.67e-12!3;UBERON:0001896!2.78e-12!3;UBERON:0005290!2.78e-12!3;UBERON:0010096!2.78e-12!3;UBERON:0000064!1.17e-11!219;UBERON:0005383!2.86e-11!3;UBERON:0005382!2.86e-11!3;UBERON:0005162!2.72e-09!2;UBERON:0000122!2.72e-09!2;UBERON:0001875!4.19e-09!2;UBERON:0006514!4.19e-09!2;UBERON:0001894!5.46e-09!7;UBERON:0006222!5.46e-09!7;UBERON:0001897!7.22e-09!2;UBERON:0002148!8.42e-09!2;UBERON:0009662!8.42e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001876!1.38e-08!2;UBERON:0001873!3.64e-08!2;UBERON:0010122!3.64e-08!2;UBERON:0000062!1.21e-07!511;UBERON:0001872!1.65e-07!5;UBERON:0002680!7.35e-07!9;UBERON:0001895!7.35e-07!9;UBERON:0010092!7.35e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!4.24e-91!57;UBERON:0005068!4.24e-91!57;UBERON:0006241!4.24e-91!57;UBERON:0007135!4.24e-91!57;UBERON:0002616!2.75e-78!59;UBERON:0002780!3.00e-74!41;UBERON:0001890!3.00e-74!41;UBERON:0006240!3.00e-74!41;UBERON:0000955!1.38e-72!69;UBERON:0006238!1.38e-72!69;UBERON:0003080!2.42e-72!42;UBERON:0001017!5.65e-67!82;UBERON:0001893!5.83e-67!34;UBERON:0002020!5.99e-67!34;UBERON:0003528!5.99e-67!34;UBERON:0002791!1.02e-63!33;UBERON:0005743!1.72e-63!86;UBERON:0000073!4.81e-63!94;UBERON:0001016!4.81e-63!94;UBERON:0001869!6.74e-60!32;UBERON:0003075!1.31e-57!86;UBERON:0007284!1.31e-57!86;UBERON:0002346!1.16e-54!90;UBERON:0007023!1.02e-51!115;UBERON:0003056!8.43e-48!61;UBERON:0002619!9.73e-44!22;UBERON:0000033!2.23e-39!123;UBERON:0000956!3.45e-38!25;UBERON:0000203!3.45e-38!25;UBERON:0001950!3.23e-37!20;UBERON:0000153!3.88e-37!129;UBERON:0007811!3.88e-37!129;UBERON:0004121!5.99e-33!169;UBERON:0002308!1.15e-32!9;UBERON:0000125!1.15e-32!9;UBERON:0002420!1.87e-32!9;UBERON:0007245!1.87e-32!9;UBERON:0010009!1.87e-32!9;UBERON:0010011!1.87e-32!9;UBERON:0000454!1.87e-32!9;UBERON:0000924!5.69e-32!173;UBERON:0006601!5.69e-32!173;UBERON:0009663!1.39e-25!7;UBERON:0000025!1.20e-24!194;UBERON:0002298!2.87e-23!8;UBERON:0003076!4.61e-19!15;UBERON:0003057!4.61e-19!15;UBERON:0000349!8.67e-19!5;UBERON:0004111!5.77e-18!241;UBERON:0004732!9.24e-18!13;UBERON:0001871!8.64e-17!7;UBERON:0000200!7.96e-16!6;UBERON:0000477!1.50e-15!286;UBERON:0004733!1.07e-14!12;UBERON:0002028!1.07e-14!12;UBERON:0007277!1.07e-14!12;UBERON:0000369!1.88e-14!4;UBERON:0002435!1.88e-14!4;UBERON:0000204!1.88e-14!4;UBERON:0010082!1.88e-14!4;UBERON:0000483!1.23e-13!309;UBERON:0000119!2.07e-13!312;UBERON:0006331!1.29e-12!3;UBERON:0002021!1.75e-12!5;UBERON:0000988!2.05e-12!3;UBERON:0000475!2.09e-12!365;UBERON:0002771!2.67e-12!3;UBERON:0001896!2.78e-12!3;UBERON:0005290!2.78e-12!3;UBERON:0010096!2.78e-12!3;UBERON:0000064!1.17e-11!219;UBERON:0005383!2.86e-11!3;UBERON:0005382!2.86e-11!3;UBERON:0005162!2.72e-09!2;UBERON:0000122!2.72e-09!2;UBERON:0001875!4.19e-09!2;UBERON:0006514!4.19e-09!2;UBERON:0001894!5.46e-09!7;UBERON:0006222!5.46e-09!7;UBERON:0001897!7.22e-09!2;UBERON:0002148!8.42e-09!2;UBERON:0009662!8.42e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001876!1.38e-08!2;UBERON:0001873!3.64e-08!2;UBERON:0010122!3.64e-08!2;UBERON:0000062!1.21e-07!511;UBERON:0001872!1.65e-07!5;UBERON:0002680!7.35e-07!9;UBERON:0001895!7.35e-07!9;UBERON:0010092!7.35e-07!9 | ||
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|short_description=p12@ABCA2 | |short_description=p12@ABCA2 | ||
}} | }} |
Latest revision as of 15:12, 16 September 2015
Short description: | p12@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 197bp_to_uc010nca.2_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data