FFCP PHASE1:Hg19::chr3:129407466..129407477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_uc003emy.3_5end | |association_with_transcript=22bp_to_uc003emy.3_5end | ||
|cluster_id=chr3:129407466..129407477,- | |||
|coexpression_cluster_id=C1127 | |coexpression_cluster_id=C1127 | ||
|description=CAGE_peak_19_at_TMCC1_5end | |description=CAGE_peak_19_at_TMCC1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.81e-11;1 | |ontology_enrichment_celltype_v019=CL:0002553;2.81e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.78e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.78e-14;3!UBERON:0006222;2.81e-11;1!UBERON:0005425;2.81e-11;1!UBERON:0006601;1.04e-07;82 | |ontology_enrichment_development_v019=UBERON:0006215;1.78e-14;3!UBERON:0006222;2.81e-11;1!UBERON:0005425;2.81e-11;1!UBERON:0006601;1.04e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-56!57;UBERON:0005068!2.19e-56!57;UBERON:0006241!2.19e-56!57;UBERON:0007135!2.19e-56!57;UBERON:0001017!2.68e-55!82;UBERON:0007023!1.23e-54!115;UBERON:0005743!2.88e-54!86;UBERON:0000073!2.71e-52!94;UBERON:0001016!2.71e-52!94;UBERON:0000955!1.38e-48!69;UBERON:0006238!1.38e-48!69;UBERON:0002616!3.51e-48!59;UBERON:0002780!4.72e-44!41;UBERON:0001890!4.72e-44!41;UBERON:0006240!4.72e-44!41;UBERON:0003080!8.45e-43!42;UBERON:0003075!6.28e-39!86;UBERON:0007284!6.28e-39!86;UBERON:0002020!2.80e-37!34;UBERON:0003528!2.80e-37!34;UBERON:0001893!4.88e-37!34;UBERON:0002346!1.24e-36!90;UBERON:0002791!2.51e-35!33;UBERON:0001869!5.82e-33!32;UBERON:0003056!1.84e-30!61;UBERON:0000033!2.24e-30!123;UBERON:0000153!1.18e-29!129;UBERON:0007811!1.18e-29!129;UBERON:0004121!4.79e-29!169;UBERON:0000924!5.11e-28!173;UBERON:0006601!5.11e-28!173;UBERON:0002619!1.39e-21!22;UBERON:0000956!6.37e-21!25;UBERON:0000203!6.37e-21!25;UBERON:0002308!1.05e-19!9;UBERON:0000125!1.05e-19!9;UBERON:0001950!4.74e-18!20;UBERON:0000025!1.34e-16!194;UBERON:0002420!1.84e-15!9;UBERON:0007245!1.84e-15!9;UBERON:0010009!1.84e-15!9;UBERON:0010011!1.84e-15!9;UBERON:0000454!1.84e-15!9;UBERON:0009663!2.00e-15!7;UBERON:0004111!3.39e-15!241;UBERON:0003076!3.37e-14!15;UBERON:0003057!3.37e-14!15;UBERON:0004732!1.22e-13!13;UBERON:0000477!1.96e-12!286;UBERON:0004733!1.00e-11!12;UBERON:0002028!1.00e-11!12;UBERON:0007277!1.00e-11!12;UBERON:0000475!5.62e-11!365;UBERON:0002298!1.42e-10!8;UBERON:0000483!2.25e-10!309;UBERON:0000119!3.91e-10!312;UBERON:0000200!3.57e-09!6;UBERON:0002680!4.02e-09!9;UBERON:0001895!4.02e-09!9;UBERON:0010092!4.02e-09!9;UBERON:0000369!9.13e-09!4;UBERON:0002435!9.13e-09!4;UBERON:0000204!9.13e-09!4;UBERON:0010082!9.13e-09!4;UBERON:0001894!2.69e-08!7;UBERON:0006222!2.69e-08!7;UBERON:0006331!2.91e-08!3;UBERON:0000988!8.19e-08!3;UBERON:0000349!1.08e-07!5;UBERON:0002771!1.71e-07!3;UBERON:0001872!1.97e-07!5;UBERON:0000064!2.94e-07!219;UBERON:0000481!3.03e-07!347;UBERON:0001871!4.04e-07!7;UBERON:0005383!5.63e-07!3;UBERON:0005382!5.63e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.19e-56!57;UBERON:0005068!2.19e-56!57;UBERON:0006241!2.19e-56!57;UBERON:0007135!2.19e-56!57;UBERON:0001017!2.68e-55!82;UBERON:0007023!1.23e-54!115;UBERON:0005743!2.88e-54!86;UBERON:0000073!2.71e-52!94;UBERON:0001016!2.71e-52!94;UBERON:0000955!1.38e-48!69;UBERON:0006238!1.38e-48!69;UBERON:0002616!3.51e-48!59;UBERON:0002780!4.72e-44!41;UBERON:0001890!4.72e-44!41;UBERON:0006240!4.72e-44!41;UBERON:0003080!8.45e-43!42;UBERON:0003075!6.28e-39!86;UBERON:0007284!6.28e-39!86;UBERON:0002020!2.80e-37!34;UBERON:0003528!2.80e-37!34;UBERON:0001893!4.88e-37!34;UBERON:0002346!1.24e-36!90;UBERON:0002791!2.51e-35!33;UBERON:0001869!5.82e-33!32;UBERON:0003056!1.84e-30!61;UBERON:0000033!2.24e-30!123;UBERON:0000153!1.18e-29!129;UBERON:0007811!1.18e-29!129;UBERON:0004121!4.79e-29!169;UBERON:0000924!5.11e-28!173;UBERON:0006601!5.11e-28!173;UBERON:0002619!1.39e-21!22;UBERON:0000956!6.37e-21!25;UBERON:0000203!6.37e-21!25;UBERON:0002308!1.05e-19!9;UBERON:0000125!1.05e-19!9;UBERON:0001950!4.74e-18!20;UBERON:0000025!1.34e-16!194;UBERON:0002420!1.84e-15!9;UBERON:0007245!1.84e-15!9;UBERON:0010009!1.84e-15!9;UBERON:0010011!1.84e-15!9;UBERON:0000454!1.84e-15!9;UBERON:0009663!2.00e-15!7;UBERON:0004111!3.39e-15!241;UBERON:0003076!3.37e-14!15;UBERON:0003057!3.37e-14!15;UBERON:0004732!1.22e-13!13;UBERON:0000477!1.96e-12!286;UBERON:0004733!1.00e-11!12;UBERON:0002028!1.00e-11!12;UBERON:0007277!1.00e-11!12;UBERON:0000475!5.62e-11!365;UBERON:0002298!1.42e-10!8;UBERON:0000483!2.25e-10!309;UBERON:0000119!3.91e-10!312;UBERON:0000200!3.57e-09!6;UBERON:0002680!4.02e-09!9;UBERON:0001895!4.02e-09!9;UBERON:0010092!4.02e-09!9;UBERON:0000369!9.13e-09!4;UBERON:0002435!9.13e-09!4;UBERON:0000204!9.13e-09!4;UBERON:0010082!9.13e-09!4;UBERON:0001894!2.69e-08!7;UBERON:0006222!2.69e-08!7;UBERON:0006331!2.91e-08!3;UBERON:0000988!8.19e-08!3;UBERON:0000349!1.08e-07!5;UBERON:0002771!1.71e-07!3;UBERON:0001872!1.97e-07!5;UBERON:0000064!2.94e-07!219;UBERON:0000481!3.03e-07!347;UBERON:0001871!4.04e-07!7;UBERON:0005383!5.63e-07!3;UBERON:0005382!5.63e-07!3 | ||
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|short_description=p19@TMCC1 | |short_description=p19@TMCC1 | ||
}} | }} |
Latest revision as of 18:05, 24 September 2015
Short description: | p19@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TMCC1_5end |
Coexpression cluster: | C1127_cerebellum_substantia_spinal_thalamus_medulla_occipital_globus |
Association with transcript: | 22bp_to_uc003emy.3_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lung fibroblast | 1.78e-11 | 1 |