FFCP PHASE1:Hg19::chr14:39417473..39417480,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553932,uc001wun.2,uc001wuo.2_5end | |association_with_transcript=0bp_to_ENST00000553932,uc001wun.2,uc001wuo.2_5end | ||
|cluster_id=chr14:39417473..39417480,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_ENST00000553932_5end,CAGE_peak_1_at_uc001wun.2_5end,CAGE_peak_1_at_uc001wuo.2_5end | |description=CAGE_peak_1_at_ENST00000553932_5end,CAGE_peak_1_at_uc001wun.2_5end,CAGE_peak_1_at_uc001wuo.2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.62e-18;3!UBERON:0003057;1.62e-18;3!UBERON:0005425;6.21e-15;1!UBERON:0006601;1.66e-08;82 | |ontology_enrichment_development_v019=UBERON:0006241;1.62e-18;3!UBERON:0003057;1.62e-18;3!UBERON:0005425;6.21e-15;1!UBERON:0006601;1.66e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.43e-83!57;UBERON:0005068!3.43e-83!57;UBERON:0006241!3.43e-83!57;UBERON:0007135!3.43e-83!57;UBERON:0002616!8.08e-71!59;UBERON:0002020!3.51e-63!34;UBERON:0003528!3.51e-63!34;UBERON:0001893!6.22e-63!34;UBERON:0000955!3.85e-62!69;UBERON:0006238!3.85e-62!69;UBERON:0005743!4.00e-61!86;UBERON:0001017!4.21e-61!82;UBERON:0002780!9.45e-61!41;UBERON:0001890!9.45e-61!41;UBERON:0006240!9.45e-61!41;UBERON:0007023!1.01e-60!115;UBERON:0002791!6.42e-60!33;UBERON:0003080!3.56e-59!42;UBERON:0003075!1.27e-58!86;UBERON:0007284!1.27e-58!86;UBERON:0000073!7.56e-58!94;UBERON:0001016!7.56e-58!94;UBERON:0001869!5.25e-56!32;UBERON:0002346!1.22e-55!90;UBERON:0003056!5.50e-42!61;UBERON:0002619!3.42e-39!22;UBERON:0000956!1.13e-38!25;UBERON:0000203!1.13e-38!25;UBERON:0001950!1.01e-37!20;UBERON:0000153!1.21e-37!129;UBERON:0007811!1.21e-37!129;UBERON:0000033!1.39e-35!123;UBERON:0004121!1.86e-28!169;UBERON:0000924!1.36e-27!173;UBERON:0006601!1.36e-27!173;UBERON:0002420!3.68e-27!9;UBERON:0007245!3.68e-27!9;UBERON:0010009!3.68e-27!9;UBERON:0010011!3.68e-27!9;UBERON:0000454!3.68e-27!9;UBERON:0002308!4.51e-27!9;UBERON:0000125!4.51e-27!9;UBERON:0003076!5.61e-24!15;UBERON:0003057!5.61e-24!15;UBERON:0002298!1.86e-23!8;UBERON:0004732!1.43e-22!13;UBERON:0000025!4.69e-21!194;UBERON:0009663!4.78e-20!7;UBERON:0004733!3.21e-19!12;UBERON:0002028!3.21e-19!12;UBERON:0007277!3.21e-19!12;UBERON:0001871!2.70e-17!7;UBERON:0004111!2.80e-16!241;UBERON:0000200!6.95e-16!6;UBERON:0000477!4.36e-14!286;UBERON:0000064!5.64e-14!219;UBERON:0000483!3.10e-13!309;UBERON:0000349!5.10e-13!5;UBERON:0000119!5.14e-13!312;UBERON:0006331!1.06e-12!3;UBERON:0002771!1.15e-12!3;UBERON:0000988!1.76e-12!3;UBERON:0001896!2.13e-12!3;UBERON:0005290!2.13e-12!3;UBERON:0010096!2.13e-12!3;UBERON:0001872!2.60e-12!5;UBERON:0000475!1.83e-10!365;UBERON:0002680!2.39e-10!9;UBERON:0001895!2.39e-10!9;UBERON:0010092!2.39e-10!9;UBERON:0001875!1.85e-09!2;UBERON:0006514!1.85e-09!2;UBERON:0005162!2.77e-09!2;UBERON:0000122!2.77e-09!2;UBERON:0000369!4.37e-09!4;UBERON:0002435!4.37e-09!4;UBERON:0000204!4.37e-09!4;UBERON:0010082!4.37e-09!4;UBERON:0001876!5.86e-09!2;UBERON:0002148!7.40e-09!2;UBERON:0009662!7.40e-09!2;UBERON:0000062!4.19e-08!511;UBERON:0002021!1.57e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!3.43e-83!57;UBERON:0005068!3.43e-83!57;UBERON:0006241!3.43e-83!57;UBERON:0007135!3.43e-83!57;UBERON:0002616!8.08e-71!59;UBERON:0002020!3.51e-63!34;UBERON:0003528!3.51e-63!34;UBERON:0001893!6.22e-63!34;UBERON:0000955!3.85e-62!69;UBERON:0006238!3.85e-62!69;UBERON:0005743!4.00e-61!86;UBERON:0001017!4.21e-61!82;UBERON:0002780!9.45e-61!41;UBERON:0001890!9.45e-61!41;UBERON:0006240!9.45e-61!41;UBERON:0007023!1.01e-60!115;UBERON:0002791!6.42e-60!33;UBERON:0003080!3.56e-59!42;UBERON:0003075!1.27e-58!86;UBERON:0007284!1.27e-58!86;UBERON:0000073!7.56e-58!94;UBERON:0001016!7.56e-58!94;UBERON:0001869!5.25e-56!32;UBERON:0002346!1.22e-55!90;UBERON:0003056!5.50e-42!61;UBERON:0002619!3.42e-39!22;UBERON:0000956!1.13e-38!25;UBERON:0000203!1.13e-38!25;UBERON:0001950!1.01e-37!20;UBERON:0000153!1.21e-37!129;UBERON:0007811!1.21e-37!129;UBERON:0000033!1.39e-35!123;UBERON:0004121!1.86e-28!169;UBERON:0000924!1.36e-27!173;UBERON:0006601!1.36e-27!173;UBERON:0002420!3.68e-27!9;UBERON:0007245!3.68e-27!9;UBERON:0010009!3.68e-27!9;UBERON:0010011!3.68e-27!9;UBERON:0000454!3.68e-27!9;UBERON:0002308!4.51e-27!9;UBERON:0000125!4.51e-27!9;UBERON:0003076!5.61e-24!15;UBERON:0003057!5.61e-24!15;UBERON:0002298!1.86e-23!8;UBERON:0004732!1.43e-22!13;UBERON:0000025!4.69e-21!194;UBERON:0009663!4.78e-20!7;UBERON:0004733!3.21e-19!12;UBERON:0002028!3.21e-19!12;UBERON:0007277!3.21e-19!12;UBERON:0001871!2.70e-17!7;UBERON:0004111!2.80e-16!241;UBERON:0000200!6.95e-16!6;UBERON:0000477!4.36e-14!286;UBERON:0000064!5.64e-14!219;UBERON:0000483!3.10e-13!309;UBERON:0000349!5.10e-13!5;UBERON:0000119!5.14e-13!312;UBERON:0006331!1.06e-12!3;UBERON:0002771!1.15e-12!3;UBERON:0000988!1.76e-12!3;UBERON:0001896!2.13e-12!3;UBERON:0005290!2.13e-12!3;UBERON:0010096!2.13e-12!3;UBERON:0001872!2.60e-12!5;UBERON:0000475!1.83e-10!365;UBERON:0002680!2.39e-10!9;UBERON:0001895!2.39e-10!9;UBERON:0010092!2.39e-10!9;UBERON:0001875!1.85e-09!2;UBERON:0006514!1.85e-09!2;UBERON:0005162!2.77e-09!2;UBERON:0000122!2.77e-09!2;UBERON:0000369!4.37e-09!4;UBERON:0002435!4.37e-09!4;UBERON:0000204!4.37e-09!4;UBERON:0010082!4.37e-09!4;UBERON:0001876!5.86e-09!2;UBERON:0002148!7.40e-09!2;UBERON:0009662!7.40e-09!2;UBERON:0000062!4.19e-08!511;UBERON:0002021!1.57e-07!5 | ||
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|short_description=p1@ENST00000553932,p1@uc001wun.2,p1@uc001wuo.2 | |short_description=p1@ENST00000553932,p1@uc001wun.2,p1@uc001wuo.2 | ||
}} | }} |
Latest revision as of 20:37, 24 July 2015
Short description: | p1@ENST00000553932, p1@uc001wun.2, p1@uc001wuo.2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553932_5end, CAGE_peak_1_at_uc001wun.2_5end, CAGE_peak_1_at_uc001wuo.2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000553932, uc001wun.2, uc001wuo.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data