FFCP PHASE1:Hg19::chrX:151619746..151619815,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:151619746..151619815,-
|short_description=p1@GABRA3
|description=CAGE_peak_1_at_GABRA3_5end
|association_with_transcript=14bp_to_ENST00000370314_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2556 | |EntrezGene=2556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4077 | |HGNC=4077 | ||
|TSSclassifier=strong | |||
|UniProt=P34903 | |UniProt=P34903 | ||
|association_with_transcript=14bp_to_ENST00000370314_5end | |||
|cluster_id=chrX:151619746..151619815,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GABRA3_5end | |||
|id=chrX:151619746..151619815,- | |||
|ontology_enrichment_celltype=CL:0000047!1.22e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.00e-10;25!CL:0000540;1.06e-09;6!CL:0000404;1.06e-09;6!CL:0000128;1.80e-08;7!CL:0000126;1.80e-08;7!CL:0000127;1.80e-08;7!CL:0002322;5.02e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.11e-12,8;CL:0002319,9.43e-11,25;CL:0000133,1.05e-10,59;CL:0000540,1.10e-09,6;CL:0000031,1.10e-09,6;CL:0000404,1.10e-09,6;CL:0000128,1.65e-08,7;CL:0000126,1.65e-08,7;CL:0000127,1.65e-08,7;CL:0002453,1.65e-08,7;CL:0002322,5.16e-08,5;CL:0000221,9.50e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-14;82!CL:0000031;1.06e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.25e-51;34!UBERON:0001869;5.15e-51;32!UBERON:0003528;7.13e-51;34!UBERON:0002020;7.13e-51;34!UBERON:0002791;2.01e-50;32!UBERON:0000073;2.38e-46;53!UBERON:0002616;2.38e-46;53!UBERON:0002780;1.16e-44;41!UBERON:0001890;1.16e-44;41!UBERON:0000956;1.73e-44;25!UBERON:0000203;1.73e-44;25!UBERON:0002619;3.20e-40;22!UBERON:0001950;2.10e-36;20!UBERON:0000955;1.44e-31;68!UBERON:0001017;2.17e-30;75!UBERON:0001016;2.45e-26;83!UBERON:0004733;1.07e-19;12!UBERON:0002028;1.07e-19;12!UBERON:0004732;6.12e-18;13!UBERON:0002420;3.05e-16;9!UBERON:0007245;3.05e-16;9!UBERON:0010009;3.05e-16;9!UBERON:0010011;3.05e-16;9!UBERON:0000454;3.05e-16;9!UBERON:0000125;6.52e-16;9!UBERON:0002308;6.52e-16;9!UBERON:0002680;8.39e-15;9!UBERON:0001895;8.39e-15;9!UBERON:0000200;6.43e-13;6!UBERON:0009663;1.23e-12;7!UBERON:0002298;1.48e-11;6!UBERON:0010314;2.99e-11;132!UBERON:0000349;5.46e-11;5!UBERON:0001872;7.20e-11;5!UBERON:0001871;8.40e-11;6!UBERON:0002021;1.78e-10;5!UBERON:0011216;7.43e-10;132!UBERON:0002037;7.53e-10;6!UBERON:0007023;1.88e-09;114!UBERON:0007625;6.73e-09;11!UBERON:0000369;1.29e-08;4!UBERON:0002435;1.29e-08;4!UBERON:0000204;1.29e-08;4!UBERON:0001870;2.32e-07;3!UBERON:0000488;2.96e-07;4!UBERON:0000970;8.12e-07;20 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,1.74753097704138,1.58260186937072,0,0,0,0,0,0,8.74159512345194,2.44800829493104,1.25381888591235,6.5834277040143,3.14811177667634,1.75759695432724,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,6.42836756715661,4.21285855178871,2.19586964232815,4.97720486891308,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,1.8034837803194,1.67505170698431,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,2.31750041646231,1.85541675650079,1.04574548582567,1.34759371519982,2.52320850875628,1.45990943630332,3.12899064659632,1.28648187638577,1.38134921352481,0,0,0,0,0,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0.38474715694639,0,0,0,0,0,0,0,0,2.09080345523293,1.20097467208968,0,0,0,0,0,0,0,5.10093781890338,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0.581267877027924,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0.112085143993527,0,0,0,2.54094624222463,10.4111883086097,4.63973287666617,7.53823194004569,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,2.56450125116389,1.31205858279882,0,1.03041011647722,0.183138929636687,0.165018999841176,0,0,0,0.386682873168488,0,0,0,0.644521469209642,0.435050081742686,0.596586391912706,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0.35667105148125,1.77380532035299,0,0,0,0,0,0,0,1.50630081242847,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,31.8127247285215,20.3970653795243,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,11.6319929531426,28.2942699393646,27.9459317201672,0,0,0,0,0,0,0,0,0,7.08593108651071,12.5420296170424,3.05163472634166,2.54332297841817,1.77328571372128,19.9640711410115,0,0,0.846452843541768,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0.158936578980379,0,0,5.51276978592369,0.432777279484182,0.995261931078505,0.176915129006678,0,0,0,0,9.0991529523914,0.802577647298789,7.73072670893619,0,0,0,0,0,30.3012034014185,1.0741718536843,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,7.45736444575757,0,0,46.2168810477915,0.195551382734803,0,0,0,0,0,0,0,0,0,0.407712618220842,0,2.65195365854437,0,4.80336230967832,2.73810757783986,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,36.5805657312279,27.2406812223151,1.28602518772015,1.51293380256957,2.49264202817511,0,0,65.3665229640345,0,0,0.104909176269996,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,2.93928624098468,3.59190574687462,0,0,0,0.146552233678082,0,12.5404467670704,9.38851472373099,0,0,0,0,0,0,0,0,0,0,0,0,0,28.7408996137929,32.7845226587785,31.8488551394124,27.041241032604,12.0415931094915,6.65574309221114,15.5241007353459,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,12.468825903175,0.231522474323834,0,0,0,0,0.883445729729405,0.38582807654183,0,0,0,0,23.089158837339,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,20.8467825224952,0.107824811396682,0,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0,37.317179781043,15.5866233958143,15.803752046658,18.2553564174272,24.7030262297284,32.5730659106466,25.5131520098325,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0.523813388962845,0,0,41.4005393710759,21.8701867611877,26.6625967486527,42.8056718808871,22.425967169747,0,0,0,0,0.535701835878287,1.00885116665647,4.24875922965642,0.455324382702595,1.41923792260222,0,0,15.2931899197871,35.6488432710642,0,0,0.706437835654626,24.5100320268963,1.68163297988273,0.9131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| ||
|short_description=p1@GABRA3 | |||
}} | }} |
Latest revision as of 22:55, 19 September 2015
Short description: | p1@GABRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GABRA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 14bp_to_ENST00000370314_5end |
EntrezGene: | GABRA3 |
HGNC: | 4077 |
UniProt: | P34903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.11e-12 | 8 |
neural cell | 9.43e-11 | 25 |
neurectodermal cell | 1.05e-10 | 59 |
neuron | 1.10e-09 | 6 |
neuroblast | 1.10e-09 | 6 |
electrically signaling cell | 1.10e-09 | 6 |
oligodendrocyte | 1.65e-08 | 7 |
macroglial cell | 1.65e-08 | 7 |
astrocyte | 1.65e-08 | 7 |
oligodendrocyte precursor cell | 1.65e-08 | 7 |
embryonic stem cell | 5.16e-08 | 5 |
ectodermal cell | 9.50e-08 | 72 |