FFCP PHASE1:Hg19::chr22:50523689..50523719,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:50523689..50523719,- to FFCP PHASE1:Hg19::chr22:50523689..50523719,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23209 | |EntrezGene=23209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |HGNC=17082 | ||
|TSSclassifier=strong | |||
|UniProt=Q15049 | |UniProt=Q15049 | ||
|association_with_transcript=-1bp_to_ENST00000450140_5end | |||
|cluster_id=chr22:50523689..50523719,- | |||
|coexpression_cluster_id=C486 | |||
|description=CAGE_peak_5_at_MLC1_5end | |||
|id=chr22:50523689..50523719,- | |||
|ontology_enrichment_celltype=CL:0000128!2.12e-07!7;CL:0000126!2.12e-07!7;CL:0000127!2.12e-07!7;CL:0002453!2.12e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;8.84e-08;7!CL:0000126;8.84e-08;7!CL:0000127;8.84e-08;7!CL:0002605;1.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.58e-08,7;CL:0000126,8.58e-08,7;CL:0000127,8.58e-08,7;CL:0002453,8.58e-08,7;CL:0002605,1.58e-07,3;CL:0000047,1.83e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.35e-15;82!UBERON:0006241;7.26e-08;3!UBERON:0003057;7.26e-08;3!UBERON:0006215;4.40e-07;3 | |||
|ontology_enrichment_disease=DOID:8692!3.54e-29!31;DOID:1240!7.50e-27!39;DOID:2531!2.85e-18!51;DOID:0060083!2.85e-18!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.64e-21;31!DOID:1240;1.53e-16;39!DOID:2531;1.22e-09;51!DOID:0060083;1.22e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.85e-22,31;DOID:1240,1.49e-20,39;DOID:2531,2.28e-14,51;DOID:0060083,2.28e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.33e-66!57;UBERON:0005068!7.33e-66!57;UBERON:0006241!7.33e-66!57;UBERON:0007135!7.33e-66!57;UBERON:0001017!3.14e-65!82;UBERON:0005743!2.99e-61!86;UBERON:0000073!1.86e-57!94;UBERON:0001016!1.86e-57!94;UBERON:0002616!7.72e-55!59;UBERON:0000955!1.14e-54!69;UBERON:0006238!1.14e-54!69;UBERON:0002780!8.48e-50!41;UBERON:0001890!8.48e-50!41;UBERON:0006240!8.48e-50!41;UBERON:0003080!2.61e-48!42;UBERON:0001893!1.55e-46!34;UBERON:0002020!2.33e-46!34;UBERON:0003528!2.33e-46!34;UBERON:0002346!1.71e-45!90;UBERON:0002791!3.43e-45!33;UBERON:0001869!1.00e-43!32;UBERON:0003075!4.29e-41!86;UBERON:0007284!4.29e-41!86;UBERON:0000956!9.64e-34!25;UBERON:0000203!9.64e-34!25;UBERON:0007023!3.01e-32!115;UBERON:0002619!9.40e-30!22;UBERON:0003056!2.77e-29!61;UBERON:0000924!6.10e-28!173;UBERON:0006601!6.10e-28!173;UBERON:0001950!1.15e-26!20;UBERON:0004121!7.71e-25!169;UBERON:0000153!1.45e-24!129;UBERON:0007811!1.45e-24!129;UBERON:0000033!2.04e-24!123;UBERON:0003076!6.82e-18!15;UBERON:0003057!6.82e-18!15;UBERON:0002420!2.10e-14!9;UBERON:0007245!2.10e-14!9;UBERON:0010009!2.10e-14!9;UBERON:0010011!2.10e-14!9;UBERON:0000454!2.10e-14!9;UBERON:0002308!7.14e-14!9;UBERON:0000125!7.14e-14!9;UBERON:0004733!8.16e-14!12;UBERON:0002028!8.16e-14!12;UBERON:0007277!8.16e-14!12;UBERON:0004732!1.60e-12!13;UBERON:0009663!2.81e-11!7;UBERON:0000025!2.84e-11!194;UBERON:0000200!5.24e-10!6;UBERON:0001871!9.31e-10!7;UBERON:0002680!1.37e-09!9;UBERON:0001895!1.37e-09!9;UBERON:0010092!1.37e-09!9;UBERON:0002298!2.19e-09!8;UBERON:0000349!3.24e-09!5;UBERON:0001872!3.54e-08!5;UBERON:0002021!6.19e-08!5;UBERON:0000369!1.44e-07!4;UBERON:0002435!1.44e-07!4;UBERON:0000204!1.44e-07!4;UBERON:0010082!1.44e-07!4;UBERON:0004111!1.60e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.61e-53;34!UBERON:0002020;8.61e-53;34!UBERON:0001893;1.51e-52;34!UBERON:0001869;5.63e-52;32!UBERON:0002791;7.87e-52;32!UBERON:0000073;3.27e-45;53!UBERON:0002616;3.27e-45;53!UBERON:0002780;4.03e-45;41!UBERON:0001890;4.03e-45;41!UBERON:0000956;8.95e-43;25!UBERON:0000203;8.95e-43;25!UBERON:0002619;6.34e-37;22!UBERON:0001950;1.96e-32;20!UBERON:0001017;5.66e-32;75!UBERON:0000955;2.35e-31;68!UBERON:0001016;3.08e-27;83!UBERON:0002420;1.13e-20;9!UBERON:0007245;1.13e-20;9!UBERON:0010009;1.13e-20;9!UBERON:0010011;1.13e-20;9!UBERON:0000454;1.13e-20;9!UBERON:0000125;6.02e-20;9!UBERON:0002308;6.02e-20;9!UBERON:0004733;4.76e-17;12!UBERON:0002028;4.76e-17;12!UBERON:0009663;5.48e-16;7!UBERON:0004732;1.44e-15;13!UBERON:0000200;3.27e-14;6!UBERON:0002298;8.96e-14;6!UBERON:0000349;5.83e-13;5!UBERON:0002021;4.88e-11;5!UBERON:0002680;5.47e-11;9!UBERON:0001895;5.47e-11;9!UBERON:0000369;1.69e-10;4!UBERON:0002435;1.69e-10;4!UBERON:0000204;1.69e-10;4!UBERON:0007023;1.69e-10;114!UBERON:0011216;4.05e-10;132!UBERON:0001871;6.83e-09;6!UBERON:0005383;1.61e-08;3!UBERON:0005382;1.61e-08;3!UBERON:0001896;3.43e-08;3!UBERON:0005290;3.43e-08;3!UBERON:0001870;4.52e-08;3!UBERON:0001872;5.84e-08;5!UBERON:0002240;7.26e-08;3!UBERON:0005174;7.26e-08;3!UBERON:0001137;7.26e-08;3!UBERON:0000988;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.46e-87,56;UBERON:0005068,1.46e-87,56;UBERON:0006241,1.46e-87,56;UBERON:0007135,1.46e-87,56;UBERON:0001017,1.25e-85,81;UBERON:0001016,3.23e-81,89;UBERON:0000073,4.90e-81,53;UBERON:0002616,4.90e-81,53;UBERON:0000955,6.84e-72,68;UBERON:0006238,6.84e-72,68;UBERON:0002780,2.04e-64,41;UBERON:0001890,2.04e-64,41;UBERON:0003080,2.04e-64,41;UBERON:0006240,2.04e-64,41;UBERON:0001893,4.81e-62,34;UBERON:0003528,8.57e-62,34;UBERON:0002020,8.57e-62,34;UBERON:0001869,7.43e-58,32;UBERON:0002791,9.59e-58,32;UBERON:0002346,1.27e-57,86;UBERON:0003075,1.13e-55,82;UBERON:0007284,1.13e-55,82;UBERON:0000956,4.97e-43,25;UBERON:0000203,4.97e-43,25;UBERON:0010371,4.57e-41,104;UBERON:0003056,4.08e-40,61;UBERON:0004121,2.63e-38,171;UBERON:0000924,2.63e-38,171;UBERON:0006601,2.63e-38,171;UBERON:0002619,4.13e-37,22;UBERON:0001950,1.37e-32,20;UBERON:0007023,6.18e-32,114;UBERON:0010314,3.77e-31,132;UBERON:0011216,2.03e-25,223;UBERON:0003076,5.07e-23,15;UBERON:0003057,5.07e-23,15;UBERON:0002420,8.66e-21,9;UBERON:0007245,8.66e-21,9;UBERON:0010009,8.66e-21,9;UBERON:0010011,8.66e-21,9;UBERON:0000454,8.66e-21,9;UBERON:0000125,5.44e-20,9;UBERON:0002308,5.44e-20,9;UBERON:0004733,4.99e-17,12;UBERON:0002028,4.99e-17,12;UBERON:0007277,4.99e-17,12;UBERON:0000025,3.14e-16,192;UBERON:0009663,4.21e-16,7;UBERON:0004732,1.50e-15,13;UBERON:0000200,3.35e-14,6;UBERON:0002298,8.67e-14,6;UBERON:0000349,5.11e-13,5;UBERON:0002021,4.19e-11,5;UBERON:0002680,6.20e-11,9;UBERON:0001895,6.20e-11,9;UBERON:0010092,6.20e-11,9;UBERON:0000369,1.48e-10,4;UBERON:0002435,1.48e-10,4;UBERON:0000204,1.48e-10,4;UBERON:0010082,1.48e-10,4;UBERON:0004111,1.56e-10,240;UBERON:0001871,6.14e-09,6;UBERON:0005383,1.50e-08,3;UBERON:0005382,1.50e-08,3;UBERON:0001896,3.04e-08,3;UBERON:0005290,3.04e-08,3;UBERON:0010096,3.04e-08,3;UBERON:0001870,4.26e-08,3;UBERON:0001872,5.23e-08,5;UBERON:0002240,7.18e-08,3;UBERON:0005174,7.18e-08,3;UBERON:0001137,7.18e-08,3;UBERON:0000988,3.12e-07,3 | |||
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| ||
|short_description=p5@MLC1 | |||
}} | }} |
Latest revision as of 18:21, 15 September 2015
Short description: | p5@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MLC1_5end |
Coexpression cluster: | C486_acute_Neural_chronic_neuroectodermal_caudate_Astrocyte_myelodysplastic |
Association with transcript: | -1bp_to_ENST00000450140_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | Q15049 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.58e-08 | 7 |
macroglial cell | 8.58e-08 | 7 |
astrocyte | 8.58e-08 | 7 |
oligodendrocyte precursor cell | 8.58e-08 | 7 |
astrocyte of the cerebral cortex | 1.58e-07 | 3 |
neuronal stem cell | 1.83e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.85e-22 | 31 |
leukemia | 1.49e-20 | 39 |
hematologic cancer | 2.28e-14 | 51 |
immune system cancer | 2.28e-14 | 51 |