FFCP PHASE1:Hg19::chr3:63429030..63429045,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:63429030..63429045,+ to FFCP PHASE1:Hg19::chr3:63429030..63429045,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132204 | |EntrezGene=132204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16507 | |HGNC=16507 | ||
|TSSclassifier=strong | |||
|UniProt=C9J976 | |UniProt=C9J976 | ||
|association_with_transcript=17bp_to_ENST00000465156_5end | |||
|cluster_id=chr3:63429030..63429045,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_3_at_SYNPR_5end | |||
|id=chr3:63429030..63429045,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.53e-18;82!UBERON:0010122;1.73e-11;2!UBERON:0006241;2.30e-07;3!UBERON:0003057;2.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.69e-98!57;UBERON:0005068!2.69e-98!57;UBERON:0006241!2.69e-98!57;UBERON:0007135!2.69e-98!57;UBERON:0001017!2.72e-90!82;UBERON:0005743!2.48e-89!86;UBERON:0000073!5.63e-87!94;UBERON:0001016!5.63e-87!94;UBERON:0002780!6.30e-85!41;UBERON:0001890!6.30e-85!41;UBERON:0006240!6.30e-85!41;UBERON:0001893!1.94e-84!34;UBERON:0002020!3.67e-84!34;UBERON:0003528!3.67e-84!34;UBERON:0001869!5.38e-84!32;UBERON:0003080!9.47e-83!42;UBERON:0002791!3.54e-81!33;UBERON:0002616!8.57e-81!59;UBERON:0000955!1.26e-74!69;UBERON:0006238!1.26e-74!69;UBERON:0003075!5.52e-72!86;UBERON:0007284!5.52e-72!86;UBERON:0002346!8.65e-72!90;UBERON:0002619!1.02e-68!22;UBERON:0001950!1.43e-62!20;UBERON:0000956!4.19e-60!25;UBERON:0000203!4.19e-60!25;UBERON:0003056!3.84e-58!61;UBERON:0007023!1.99e-49!115;UBERON:0000924!6.85e-45!173;UBERON:0006601!6.85e-45!173;UBERON:0000153!3.35e-44!129;UBERON:0007811!3.35e-44!129;UBERON:0004121!4.24e-44!169;UBERON:0000033!2.03e-42!123;UBERON:0002308!6.63e-25!9;UBERON:0000125!6.63e-25!9;UBERON:0000025!2.30e-23!194;UBERON:0000200!2.21e-21!6;UBERON:0001871!7.08e-21!7;UBERON:0002420!1.89e-19!9;UBERON:0007245!1.89e-19!9;UBERON:0010009!1.89e-19!9;UBERON:0010011!1.89e-19!9;UBERON:0000454!1.89e-19!9;UBERON:0009663!5.26e-19!7;UBERON:0001872!9.29e-18!5;UBERON:0002021!3.83e-17!5;UBERON:0004111!7.81e-17!241;UBERON:0003076!8.51e-17!15;UBERON:0003057!8.51e-17!15;UBERON:0000369!6.05e-16!4;UBERON:0002435!6.05e-16!4;UBERON:0000204!6.05e-16!4;UBERON:0010082!6.05e-16!4;UBERON:0000477!2.41e-15!286;UBERON:0000483!3.62e-15!309;UBERON:0000119!6.44e-15!312;UBERON:0000064!1.19e-14!219;UBERON:0002298!1.23e-14!8;UBERON:0005383!2.12e-12!3;UBERON:0005382!2.12e-12!3;UBERON:0000475!5.10e-12!365;UBERON:0002771!1.16e-11!3;UBERON:0000349!1.92e-11!5;UBERON:0002240!3.98e-11!3;UBERON:0001896!9.09e-11!3;UBERON:0005290!9.09e-11!3;UBERON:0010096!9.09e-11!3;UBERON:0000988!1.11e-10!3;UBERON:0004733!1.52e-09!12;UBERON:0002028!1.52e-09!12;UBERON:0007277!1.52e-09!12;UBERON:0001873!8.26e-09!2;UBERON:0010122!8.26e-09!2;UBERON:0004732!9.22e-09!13;UBERON:0001897!2.30e-08!2;UBERON:0001870!2.56e-08!2;UBERON:0001875!4.37e-08!2;UBERON:0006514!4.37e-08!2;UBERON:0002360!1.04e-07!2;UBERON:0000094!1.04e-07!2;UBERON:0007645!1.04e-07!2;UBERON:0001954!1.08e-07!2;UBERON:0003022!1.08e-07!2;UBERON:0002421!1.08e-07!2;UBERON:0002600!1.08e-07!2;UBERON:0002148!1.24e-07!2;UBERON:0009662!1.24e-07!2;UBERON:0000923!1.65e-07!604;UBERON:0005291!1.65e-07!604;UBERON:0006598!1.65e-07!604;UBERON:0002532!1.65e-07!604;UBERON:0002050!1.77e-07!605;UBERON:0005423!1.77e-07!605;UBERON:0000922!2.99e-07!612;UBERON:0000481!3.32e-07!347;UBERON:0000062!4.28e-07!511;UBERON:0005174!7.83e-07!5;UBERON:0001137!7.83e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.15e-77;32!UBERON:0001893;8.86e-77;34!UBERON:0002791;6.45e-73;32!UBERON:0002619;1.30e-70;22!UBERON:0003528;6.60e-70;34!UBERON:0002020;6.60e-70;34!UBERON:0001950;9.52e-70;20!UBERON:0002780;2.04e-65;41!UBERON:0001890;2.04e-65;41!UBERON:0000956;5.84e-62;25!UBERON:0000203;5.84e-62;25!UBERON:0000073;1.42e-46;53!UBERON:0002616;1.42e-46;53!UBERON:0001017;3.72e-36;75!UBERON:0000955;2.13e-33;68!UBERON:0000200;1.29e-28;6!UBERON:0001016;4.29e-26;83!UBERON:0001871;9.00e-24;6!UBERON:0000369;2.89e-21;4!UBERON:0002435;2.89e-21;4!UBERON:0000204;2.89e-21;4!UBERON:0002420;7.34e-20;9!UBERON:0000125;7.34e-20;9!UBERON:0007245;7.34e-20;9!UBERON:0002308;7.34e-20;9!UBERON:0010009;7.34e-20;9!UBERON:0010011;7.34e-20;9!UBERON:0000454;7.34e-20;9!UBERON:0009663;1.67e-18;7!UBERON:0005383;2.09e-16;3!UBERON:0005382;2.09e-16;3!UBERON:0001872;7.21e-16;5!UBERON:0001870;1.96e-15;3!UBERON:0002021;3.12e-15;5!UBERON:0007023;5.65e-14;114!UBERON:0011216;1.99e-13;132!UBERON:0001873;1.73e-11;2!UBERON:0001897;6.51e-11;2!UBERON:0002702;6.51e-11;2!UBERON:0010225;6.51e-11;2!UBERON:0002771;9.88e-11;2!UBERON:0000349;3.59e-09;5!UBERON:0010314;1.07e-07;132!UBERON:0002298;1.40e-07;6!UBERON:0002240;2.30e-07;3!UBERON:0005174;2.30e-07;3!UBERON:0001137;2.30e-07;3!UBERON:0001894;5.63e-07;7!UBERON:0000988;6.39e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.82e-91,56;UBERON:0005068,2.82e-91,56;UBERON:0006241,2.82e-91,56;UBERON:0007135,2.82e-91,56;UBERON:0002780,5.32e-91,41;UBERON:0001890,5.32e-91,41;UBERON:0003080,5.32e-91,41;UBERON:0006240,5.32e-91,41;UBERON:0001893,9.62e-88,34;UBERON:0001869,2.43e-86,32;UBERON:0000073,3.94e-85,53;UBERON:0002616,3.94e-85,53;UBERON:0003528,6.70e-81,34;UBERON:0002020,6.70e-81,34;UBERON:0002791,2.06e-79,32;UBERON:0001017,7.39e-77,81;UBERON:0000955,4.24e-73,68;UBERON:0006238,4.24e-73,68;UBERON:0001016,1.85e-72,89;UBERON:0002619,1.35e-70,22;UBERON:0001950,1.02e-69,20;UBERON:0000956,6.06e-62,25;UBERON:0000203,6.06e-62,25;UBERON:0002346,4.37e-61,86;UBERON:0003075,1.74e-60,82;UBERON:0007284,1.74e-60,82;UBERON:0003056,1.40e-59,61;UBERON:0010371,2.48e-46,104;UBERON:0007023,1.30e-39,114;UBERON:0010314,1.56e-37,132;UBERON:0004121,6.16e-37,171;UBERON:0000924,6.16e-37,171;UBERON:0006601,6.16e-37,171;UBERON:0000200,9.88e-29,6;UBERON:0011216,2.68e-28,223;UBERON:0001871,1.06e-23,6;UBERON:0000025,6.05e-22,192;UBERON:0000369,2.89e-21,4;UBERON:0002435,2.89e-21,4;UBERON:0000204,2.89e-21,4;UBERON:0010082,2.89e-21,4;UBERON:0002420,6.77e-20,9;UBERON:0007245,6.77e-20,9;UBERON:0010009,6.77e-20,9;UBERON:0010011,6.77e-20,9;UBERON:0000454,6.77e-20,9;UBERON:0000125,7.22e-20,9;UBERON:0002308,7.22e-20,9;UBERON:0009663,1.70e-18,7;UBERON:0005383,2.09e-16,3;UBERON:0005382,2.09e-16,3;UBERON:0004111,3.88e-16,240;UBERON:0001872,6.81e-16,5;UBERON:0001870,1.96e-15,3;UBERON:0002021,3.01e-15,5;UBERON:0001873,1.73e-11,2;UBERON:0010122,1.73e-11,2;UBERON:0000483,4.08e-11,306;UBERON:0000119,6.13e-11,309;UBERON:0002702,6.35e-11,2;UBERON:0001897,7.01e-11,2;UBERON:0010225,7.01e-11,2;UBERON:0002771,8.96e-11,2;UBERON:0000349,3.25e-09,5;UBERON:0003076,9.89e-08,15;UBERON:0003057,9.89e-08,15;UBERON:0002298,1.31e-07,6;UBERON:0002240,2.19e-07,3;UBERON:0005174,2.19e-07,3;UBERON:0001137,2.19e-07,3;UBERON:0000923,2.55e-07,560;UBERON:0010316,2.55e-07,560;UBERON:0005291,2.55e-07,560;UBERON:0006598,2.55e-07,560;UBERON:0010317,2.55e-07,560;UBERON:0002532,2.55e-07,560;UBERON:0002050,3.28e-07,564;UBERON:0001894,5.81e-07,7;UBERON:0006222,5.81e-07,7;UBERON:0000988,5.83e-07,3;UBERON:0005423,9.24e-07,581 | |||
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|short_description=p3@SYNPR | |||
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Latest revision as of 08:35, 19 September 2015
Short description: | p3@SYNPR |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNPR_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 17bp_to_ENST00000465156_5end |
EntrezGene: | SYNPR |
HGNC: | 16507 |
UniProt: | C9J976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data