FFCP PHASE1:Hg19::chr13:46425837..46425861,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283514|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30553|TSSclassifier=S|UniProt=Q8IW03|association_with_transcript=0bp_to_NM_198849,uc001vap.2_5end|coexpression_cluster_id=C10|description=CAGE_peak_2_at_SIAH3_5end|id=chr13:46425837..46425861,-|ontology_enrichment_celltype=CL:0002319!1.01e-09!25;CL:0000128!2.54e-07!7;CL:0000126!2.54e-07!7;CL:0000127!2.54e-07!7;CL:0002453!2.54e-07!7;CL:0000047!8.63e-07!8|ontology_enrichment_celltype_v019=CL:0002319;2.97e-07;25|ontology_enrichment_celltype_v019_2=CL:0002319,2.84e-07,25|ontology_enrichment_development_v019=UBERON:0006601;7.32e-19;82!UBERON:0006215;4.35e-09;3!UBERON:0006241;1.24e-07;3!UBERON:0003057;1.24e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.96e-60!86;UBERON:0000073!1.48e-59!94;UBERON:0001016!1.48e-59!94;UBERON:0001017!6.58e-57!82;UBERON:0001049!8.24e-53!57;UBERON:0005068!8.24e-53!57;UBERON:0006241!8.24e-53!57;UBERON:0007135!8.24e-53!57;UBERON:0000955!3.29e-46!69;UBERON:0006238!3.29e-46!69;UBERON:0002616!2.10e-45!59;UBERON:0002346!1.29e-44!90;UBERON:0003075!5.55e-43!86;UBERON:0007284!5.55e-43!86;UBERON:0000924!6.19e-38!173;UBERON:0006601!6.19e-38!173;UBERON:0002780!7.72e-38!41;UBERON:0001890!7.72e-38!41;UBERON:0006240!7.72e-38!41;UBERON:0002020!1.11e-36!34;UBERON:0003528!1.11e-36!34;UBERON:0003080!1.37e-36!42;UBERON:0004121!2.96e-36!169;UBERON:0001893!3.60e-36!34;UBERON:0001869!2.38e-35!32;UBERON:0002791!4.84e-35!33;UBERON:0000153!2.35e-34!129;UBERON:0007811!2.35e-34!129;UBERON:0003056!9.18e-33!61;UBERON:0000033!1.17e-32!123;UBERON:0007023!6.26e-31!115;UBERON:0000956!5.97e-28!25;UBERON:0000203!5.97e-28!25;UBERON:0002619!3.09e-25!22;UBERON:0001950!3.78e-23!20;UBERON:0003076!5.92e-17!15;UBERON:0003057!5.92e-17!15;UBERON:0004733!4.89e-14!12;UBERON:0002028!4.89e-14!12;UBERON:0007277!4.89e-14!12;UBERON:0004732!1.21e-12!13;UBERON:0000064!1.95e-12!219;UBERON:0000475!2.25e-11!365;UBERON:0002680!5.64e-11!9;UBERON:0001895!5.64e-11!9;UBERON:0010092!5.64e-11!9;UBERON:0000025!2.53e-10!194;UBERON:0002420!2.86e-10!9;UBERON:0007245!2.86e-10!9;UBERON:0010009!2.86e-10!9;UBERON:0010011!2.86e-10!9;UBERON:0000454!2.86e-10!9;UBERON:0002308!4.45e-10!9;UBERON:0000125!4.45e-10!9;UBERON:0000119!2.69e-09!312;UBERON:0000483!2.82e-09!309;UBERON:0004111!1.41e-08!241;UBERON:0000922!1.91e-08!612;UBERON:0000200!2.33e-08!6;UBERON:0000062!2.45e-08!511;UBERON:0001871!3.36e-08!7;UBERON:0009663!4.60e-08!7;UBERON:0002037!9.11e-08!6;UBERON:0006215!9.11e-08!6;UBERON:0001872!1.54e-07!5;UBERON:0000481!1.57e-07!347;UBERON:0000477!1.69e-07!286;UBERON:0002050!1.96e-07!605;UBERON:0005423!1.96e-07!605;UBERON:0002021!2.48e-07!5;UBERON:0000923!4.35e-07!604;UBERON:0005291!4.35e-07!604;UBERON:0006598!4.35e-07!604;UBERON:0002532!4.35e-07!604;UBERON:0000349!4.72e-07!5;UBERON:0002298!5.36e-07!8|ontology_enrichment_uberon_v019=UBERON:0001869;1.92e-57;32!UBERON:0003528;6.92e-56;34!UBERON:0002020;6.92e-56;34!UBERON:0002791;6.46e-54;32!UBERON:0000956;1.50e-52;25!UBERON:0000203;1.50e-52;25!UBERON:0001893;7.73e-52;34!UBERON:0002619;6.14e-51;22!UBERON:0001950;1.35e-46;20!UBERON:0000073;3.74e-42;53!UBERON:0002616;3.74e-42;53!UBERON:0002780;1.70e-38;41!UBERON:0001890;1.70e-38;41!UBERON:0001017;3.23e-32;75!UBERON:0000955;1.28e-31;68!UBERON:0001016;2.02e-27;83!UBERON:0004733;3.55e-23;12!UBERON:0002028;3.55e-23;12!UBERON:0004732;3.42e-21;13!UBERON:0002680;6.41e-17;9!UBERON:0001895;6.41e-17;9!UBERON:0000200;1.88e-15;6!UBERON:0002298;1.77e-14;6!UBERON:0001872;7.53e-14;5!UBERON:0002021;1.77e-13;5!UBERON:0001871;2.43e-13;6!UBERON:0002420;3.19e-13;9!UBERON:0007245;3.19e-13;9!UBERON:0010009;3.19e-13;9!UBERON:0010011;3.19e-13;9!UBERON:0000454;3.19e-13;9!UBERON:0000125;6.52e-13;9!UBERON:0002308;6.52e-13;9!UBERON:0000349;9.00e-13;5!UBERON:0000369;4.50e-11;4!UBERON:0002435;4.50e-11;4!UBERON:0000204;4.50e-11;4!UBERON:0011216;5.67e-11;132!UBERON:0002037;1.49e-10;6!UBERON:0007023;1.77e-10;114!UBERON:0009663;4.29e-09;7!UBERON:0005383;1.14e-08;3!UBERON:0005382;1.14e-08;3!UBERON:0001870;1.44e-08;3!UBERON:0000988;3.55e-08;3!UBERON:0001896;5.60e-08;3!UBERON:0005290;5.60e-08;3!UBERON:0002240;1.24e-07;3!UBERON:0005174;1.24e-07;3!UBERON:0001137;1.24e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.44e-84,56;UBERON:0005068,1.44e-84,56;UBERON:0006241,1.44e-84,56;UBERON:0007135,1.44e-84,56;UBERON:0001016,3.86e-81,89;UBERON:0001017,4.93e-81,81;UBERON:0000073,2.93e-78,53;UBERON:0002616,2.93e-78,53;UBERON:0000955,3.19e-70,68;UBERON:0006238,3.19e-70,68;UBERON:0001869,3.15e-64,32;UBERON:0003528,4.61e-64,34;UBERON:0002020,4.61e-64,34;UBERON:0001893,4.98e-60,34;UBERON:0002791,9.17e-60,32;UBERON:0002346,3.33e-58,86;UBERON:0003075,1.49e-56,82;UBERON:0007284,1.49e-56,82;UBERON:0002780,1.18e-55,41;UBERON:0001890,1.18e-55,41;UBERON:0003080,1.18e-55,41;UBERON:0006240,1.18e-55,41;UBERON:0000956,1.38e-52,25;UBERON:0000203,1.38e-52,25;UBERON:0002619,5.43e-51,22;UBERON:0001950,1.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30553 | |||
|TSSclassifier=S | |||
|UniProt=Q8IW03 | |||
|association_with_transcript=0bp_to_NM_198849,uc001vap.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_SIAH3_5end | |||
|id=chr13:46425837..46425861,- | |||
|ontology_enrichment_celltype=CL:0002319!1.01e-09!25;CL:0000128!2.54e-07!7;CL:0000126!2.54e-07!7;CL:0000127!2.54e-07!7;CL:0002453!2.54e-07!7;CL:0000047!8.63e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.97e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.84e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.32e-19;82!UBERON:0006215;4.35e-09;3!UBERON:0006241;1.24e-07;3!UBERON:0003057;1.24e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@SIAH3 | |||
}} |
Revision as of 02:21, 11 September 2013
Short description: | p2@SIAH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SIAH3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_198849, uc001vap.2_5end |
EntrezGene: | SIAH3 |
HGNC: | 30553 |
UniProt: | Q8IW03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.84e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.