FFCP PHASE1:Hg19::chr9:116299111..116299129,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5998|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9999|TSSclassifier=W|UniProt=|association_with_transcript=220bp_to_ENST00000492676_5end|coexpression_cluster_id=C4|description=CAGE_peak_18_at_RGS3_5end|id=chr9:116299111..116299129,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002566;4.20e-07;1|ontology_enrichment_celltype_v019_2=CL:0002566,4.09e-07,1|ontology_enrichment_development_v019=UBERON:0006241;1.33e-16;3!UBERON:0003057;1.33e-16;3!UBERON:0006601;2.80e-12;82!UBERON:0005425;4.20e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;6.82e-12;2|ontology_enrichment_disease_v019_2=DOID:114,1.06e-11,2|ontology_enrichment_uberon=UBERON:0007023!8.21e-79!115;UBERON:0001049!8.97e-47!57;UBERON:0005068!8.97e-47!57;UBERON:0006241!8.97e-47!57;UBERON:0007135!8.97e-47!57;UBERON:0002616!4.22e-37!59;UBERON:0001017!7.25e-36!82;UBERON:0003075!4.98e-34!86;UBERON:0007284!4.98e-34!86;UBERON:0000955!1.02e-33!69;UBERON:0006238!1.02e-33!69;UBERON:0005743!1.28e-33!86;UBERON:0002780!3.59e-33!41;UBERON:0001890!3.59e-33!41;UBERON:0006240!3.59e-33!41;UBERON:0003080!3.45e-32!42;UBERON:0002346!6.08e-32!90;UBERON:0000073!4.25e-31!94;UBERON:0001016!4.25e-31!94;UBERON:0001893!2.22e-29!34;UBERON:0002020!3.07e-29!34;UBERON:0003528!3.07e-29!34;UBERON:0002791!1.29e-27!33;UBERON:0001869!9.44e-26!32;UBERON:0000033!1.94e-20!123;UBERON:0000153!4.64e-20!129;UBERON:0007811!4.64e-20!129;UBERON:0002619!5.46e-20!22;UBERON:0003056!1.28e-19!61;UBERON:0000956!3.82e-17!25;UBERON:0000203!3.82e-17!25;UBERON:0004121!4.23e-17!169;UBERON:0001950!9.76e-17!20;UBERON:0000924!2.15e-16!173;UBERON:0006601!2.15e-16!173;UBERON:0003076!1.80e-15!15;UBERON:0003057!1.80e-15!15;UBERON:0002308!9.71e-15!9;UBERON:0000125!9.71e-15!9;UBERON:0002298!1.50e-13!8;UBERON:0000025!1.16e-12!194;UBERON:0004732!3.74e-12!13;UBERON:0004111!2.14e-11!241;UBERON:0000477!3.42e-11!286;UBERON:0002420!4.96e-11!9;UBERON:0007245!4.96e-11!9;UBERON:0010009!4.96e-11!9;UBERON:0010011!4.96e-11!9;UBERON:0000454!4.96e-11!9;UBERON:0009663!6.23e-11!7;UBERON:0004733!2.34e-10!12;UBERON:0002028!2.34e-10!12;UBERON:0007277!2.34e-10!12;UBERON:0000200!4.55e-09!6;UBERON:0001896!1.10e-07!3;UBERON:0005290!1.10e-07!3;UBERON:0010096!1.10e-07!3;UBERON:0006331!1.15e-07!3;UBERON:0000988!1.39e-07!3;UBERON:0002240!1.91e-07!3;UBERON:0000064!2.60e-07!219;UBERON:0001872!3.29e-07!5;UBERON:0002771!4.49e-07!3;UBERON:0005174!5.56e-07!5;UBERON:0001137!5.56e-07!5;UBERON:0000349!6.31e-07!5|ontology_enrichment_uberon_v019=UBERON:0002298;4.73e-31;6!UBERON:0000073;3.03e-26;53!UBERON:0002616;3.03e-26;53!UBERON:0001893;8.66e-26;34!UBERON:0002780;3.40e-25;41!UBERON:0001890;3.40e-25;41!UBERON:0003528;8.92e-24;34!UBERON:0002020;8.92e-24;34!UBERON:0002619;9.48e-21;22!UBERON:0001869;1.16e-20;32!UBERON:0002791;1.99e-19;32!UBERON:0004732;3.15e-19;13!UBERON:0001950;1.59e-18;20!UBERON:0000956;3.78e-18;25!UBERON:0000203;3.78e-18;25!UBERON:0001017;4.74e-18;75!UBERON:0001896;1.33e-16;3!UBERON:0002240;1.33e-16;3!UBERON:0005174;1.33e-16;3!UBERON:0005290;1.33e-16;3!UBERON:0001137;1.33e-16;3!UBERON:0000988;3.10e-16;3!UBERON:0001016;1.45e-15;83!UBERON:0000955;1.91e-15;68!UBERON:0004733;2.82e-15;12!UBERON:0002028;2.82e-15;12!UBERON:0000125;4.94e-15;9!UBERON:0002308;4.94e-15;9!UBERON:0000200;4.21e-14;6!UBERON:0007023;6.50e-13;114!UBERON:0005162;1.82e-12;2!UBERON:0000122;1.82e-12;2!UBERON:0001875;2.84e-12;2!UBERON:0006514;2.84e-12;2!UBERON:0001897;3.74e-12;2!UBERON:0010225;3.74e-12;2!UBERON:0002148;2.11e-11;2!UBERON:0006331;2.11e-11;2!UBERON:0009662;2.11e-11;2!UBERON:0002021;5.99e-10;5!UBERON:0001870;6.94e-08;3!UBERON:0009663;8.52e-08;7!UBERON:0001894;1.53e-07;7!UBERON:0000941;4.20e-07;1!UBERON:0001785;4.20e-07;1!UBERON:0002464;4.20e-07;1!UBERON:0004904;4.20e-07;1!UBERON:0001021;4.20e-07;1!UBERON:0002336;4.98e-07;1!UBERON:0002038;4.98e-07;1!UBERON:0011215;4.98e-07;1!UBERON:0001018;4.98e-07;1!UBERON:0009661;4.98e-07;1!UBERON:0002950;4.98e-07;1!UBERON:0002473;4.98e-07;1!UBERON:0005340;4.98e-07;1!UBERON:0003544;4.98e-07;1!UBERON:0005970;4.98e-07;1!UBERON:0002316;4.98e-07;1!UBERON:0001020;4.98e-07;1!UBERON:0001891;4.98e-07;1!UBERON:0002437;4.98e-07;1!UBERON:0011216;9.04e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.29e-62,56;UBERON:0005068,2.29e-62,56;UBERON:0006241,2.29e-62,56;UBERON:0007135,2.29e-62,56;UBERON:0000073,1.13e-51,53;UBERON:0002616,1.13e-51,53;UBERON:0003075,4.50e-48,82;UBERON:0007284,4.50e-48,82;UBERON:0002346,1.38e-45,86;UBERON:0007023,1.26e-44,114;UBERON:0001017,1.57e-44,81;UBERON:0001016,6.59e-43,89;UBERON:0000955,2.51e-42,68;UBERON:0006238,2.51e-42,68;UBERON:0002780,4.77e-37,41;UBERON:0001890,4.77e-37,41;UBERON:0003080,4.77e-37,41;UBERON:0006240,4.77e-37,41;UBERON:0010371,9.66e-37,104;UBERON:0002298,7.05e-32,6;UBERON:0001893,1.01e-30,34;UBERON:0003528,1.72e-30,34;UBERON:0002020,1.72e-30,34;UBERON:0010314,9.83e-28,132;UBERON:0003076,2.66e-27,15;UBERON:0003057,2.66e-27,15;UBERON:0003056,7.25e-27,61;UBERON:0002791,3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=220bp_to_ENST00000492676_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_18_at_RGS3_5end | |||
|id=chr9:116299111..116299129,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002566;4.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,4.09e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.33e-16;3!UBERON:0003057;1.33e-16;3!UBERON:0006601;2.80e-12;82!UBERON:0005425;4.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.82e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.06e-11,2 | |||
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|short_description=p18@RGS3 | |||
}} |
Revision as of 07:04, 14 September 2013
Short description: | p18@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_RGS3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 220bp_to_ENST00000492676_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 4.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.06e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.