FFCP PHASE1:Hg19::chrX:151619746..151619815,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2556|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4077|TSSclassifier=S|UniProt=P34903|association_with_transcript=14bp_to_ENST00000370314_5end|coexpression_cluster_id=C3|description=CAGE_peak_1_at_GABRA3_5end|id=chrX:151619746..151619815,-|ontology_enrichment_celltype=CL:0000047!1.22e-07!8|ontology_enrichment_celltype_v019=CL:0002319;1.00e-10;25!CL:0000540;1.06e-09;6!CL:0000404;1.06e-09;6!CL:0000128;1.80e-08;7!CL:0000126;1.80e-08;7!CL:0000127;1.80e-08;7!CL:0002322;5.02e-08;5|ontology_enrichment_celltype_v019_2=CL:0000047,1.11e-12,8;CL:0002319,9.43e-11,25;CL:0000133,1.05e-10,59;CL:0000540,1.10e-09,6;CL:0000031,1.10e-09,6;CL:0000404,1.10e-09,6;CL:0000128,1.65e-08,7;CL:0000126,1.65e-08,7;CL:0000127,1.65e-08,7;CL:0002453,1.65e-08,7;CL:0002322,5.16e-08,5;CL:0000221,9.50e-08,72|ontology_enrichment_development_v019=UBERON:0006601;2.35e-14;82!CL:0000031;1.06e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.67e-53!86;UBERON:0001017!5.05e-52!82;UBERON:0001049!4.10e-50!57;UBERON:0005068!4.10e-50!57;UBERON:0006241!4.10e-50!57;UBERON:0007135!4.10e-50!57;UBERON:0000073!1.02e-49!94;UBERON:0001016!1.02e-49!94;UBERON:0003075!3.51e-46!86;UBERON:0007284!3.51e-46!86;UBERON:0002346!5.31e-44!90;UBERON:0002616!9.95e-43!59;UBERON:0000955!5.90e-41!69;UBERON:0006238!5.90e-41!69;UBERON:0002780!4.88e-38!41;UBERON:0001890!4.88e-38!41;UBERON:0006240!4.88e-38!41;UBERON:0003080!1.04e-36!42;UBERON:0003056!1.26e-34!61;UBERON:0001893!7.14e-33!34;UBERON:0002020!9.77e-33!34;UBERON:0003528!9.77e-33!34;UBERON:0004121!2.85e-32!169;UBERON:0002791!8.77e-32!33;UBERON:0000924!1.84e-31!173;UBERON:0006601!1.84e-31!173;UBERON:0001869!2.37e-31!32;UBERON:0000033!1.18e-29!123;UBERON:0000153!1.22e-28!129;UBERON:0007811!1.22e-28!129;UBERON:0000956!9.64e-25!25;UBERON:0000203!9.64e-25!25;UBERON:0002619!2.31e-22!22;UBERON:0007023!3.43e-21!115;UBERON:0001950!2.73e-20!20;UBERON:0000064!1.34e-15!219;UBERON:0003076!4.32e-14!15;UBERON:0003057!4.32e-14!15;UBERON:0004733!1.67e-11!12;UBERON:0002028!1.67e-11!12;UBERON:0007277!1.67e-11!12;UBERON:0000025!2.15e-10!194;UBERON:0004732!2.78e-10!13;UBERON:0000483!1.17e-09!309;UBERON:0000119!1.38e-09!312;UBERON:0002420!1.55e-09!9;UBERON:0007245!1.55e-09!9;UBERON:0010009!1.55e-09!9;UBERON:0010011!1.55e-09!9;UBERON:0000454!1.55e-09!9;UBERON:0000922!1.72e-09!612;UBERON:0002308!2.28e-09!9;UBERON:0000125!2.28e-09!9;UBERON:0000468!5.23e-09!659;UBERON:0002680!7.86e-09!9;UBERON:0001895!7.86e-09!9;UBERON:0010092!7.86e-09!9;UBERON:0000481!9.55e-09!347;UBERON:0000062!1.81e-08!511;UBERON:0000475!7.17e-08!365;UBERON:0000467!8.60e-08!625;UBERON:0000200!9.03e-08!6;UBERON:0000477!1.06e-07!286;UBERON:0000480!1.06e-07!626;UBERON:0009663!1.45e-07!7;UBERON:0004111!2.23e-07!241;UBERON:0001871!2.54e-07!7;UBERON:0002050!3.07e-07!605;UBERON:0005423!3.07e-07!605;UBERON:0000923!6.33e-07!604;UBERON:0005291!6.33e-07!604;UBERON:0006598!6.33e-07!604;UBERON:0002532!6.33e-07!604|ontology_enrichment_uberon_v019=UBERON:0001893;2.25e-51;34!UBERON:0001869;5.15e-51;32!UBERON:0003528;7.13e-51;34!UBERON:0002020;7.13e-51;34!UBERON:0002791;2.01e-50;32!UBERON:0000073;2.38e-46;53!UBERON:0002616;2.38e-46;53!UBERON:0002780;1.16e-44;41!UBERON:0001890;1.16e-44;41!UBERON:0000956;1.73e-44;25!UBERON:0000203;1.73e-44;25!UBERON:0002619;3.20e-40;22!UBERON:0001950;2.10e-36;20!UBERON:0000955;1.44e-31;68!UBERON:0001017;2.17e-30;75!UBERON:0001016;2.45e-26;83!UBERON:0004733;1.07e-19;12!UBERON:0002028;1.07e-19;12!UBERON:0004732;6.12e-18;13!UBERON:0002420;3.05e-16;9!UBERON:0007245;3.05e-16;9!UBERON:0010009;3.05e-16;9!UBERON:0010011;3.05e-16;9!UBERON:0000454;3.05e-16;9!UBERON:0000125;6.52e-16;9!UBERON:0002308;6.52e-16;9!UBERON:0002680;8.39e-15;9!UBERON:0001895;8.39e-15;9!UBERON:0000200;6.43e-13;6!UBERON:0009663;1.23e-12;7!UBERON:0002298;1.48e-11;6!UBERON:0010314;2.99e-11;132!UBERON:0000349;5.46e-11;5!UBERON:0001872;7.20e-11;5!UBERON:0001871;8.40e-11;6!UBERON:0002021;1.78e-10;5!UBERON:0011216;7.43e-10;132!UBERON:0002037;7.53e-10;6!UBERON:0007023;1.88e-09;114!UBERON:0007625;6.73e-09;11!UBERON:0000369;1.29e-08;4!UBERON:0002435;1.29e-08;4!UBERON:0000204;1.29e-08;4!UBERON:0001870;2.32e-07;3!UBERON:0000488;2.96e-07;4!UBERON:0000970;8.12e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.03e-92,81;UBERON:0001049,5.76e-88,56;UBERON:0005068,5.76e-88,56;UBERON:0006241,5.76e-88,56;UBERON:0007135,5.76e-88,56;UBERON:0001016,9.38e-84,89;UBERON:0000073,8.41e-83,53;UBERON:0002616,8.41e-83,53;UBERON:0003075,6.10e-77,82;UBERON:0007284,6.10e-77,82;UBERON:0002346,1.70e-72,86;UBERON:0000955,1.43e-71,68;UBERON:0006238,1.43e-71,68;UBERON:0002780,2.47e-63,41;UBERON:0001890,2.47e-63,41;UBERON:0003080,2.47e-63,41;UBERON:0006240,2.47e-63,41;UBERON:0010371,8.21e-63,104;UBERON:0003056,2.66e-60,61;UBERON:0001893,1.39e-59,34;UBERON:0003528,2.49e-59,34;UBERON:0002020,2.49e-59,34;UBERON:0001869,8.82e-57,32;UBERON:0002791,6.94e-56,32;UBERON:000412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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2556 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4077 | |||
|TSSclassifier=S | |||
|UniProt=P34903 | |||
|association_with_transcript=14bp_to_ENST00000370314_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GABRA3_5end | |||
|id=chrX:151619746..151619815,- | |||
|ontology_enrichment_celltype=CL:0000047!1.22e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.00e-10;25!CL:0000540;1.06e-09;6!CL:0000404;1.06e-09;6!CL:0000128;1.80e-08;7!CL:0000126;1.80e-08;7!CL:0000127;1.80e-08;7!CL:0002322;5.02e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.11e-12,8;CL:0002319,9.43e-11,25;CL:0000133,1.05e-10,59;CL:0000540,1.10e-09,6;CL:0000031,1.10e-09,6;CL:0000404,1.10e-09,6;CL:0000128,1.65e-08,7;CL:0000126,1.65e-08,7;CL:0000127,1.65e-08,7;CL:0002453,1.65e-08,7;CL:0002322,5.16e-08,5;CL:0000221,9.50e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-14;82!CL:0000031;1.06e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@GABRA3 | |||
}} |
Revision as of 11:13, 14 September 2013
Short description: | p1@GABRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GABRA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 14bp_to_ENST00000370314_5end |
EntrezGene: | GABRA3 |
HGNC: | 4077 |
UniProt: | P34903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.11e-12 | 8 |
neural cell | 9.43e-11 | 25 |
neurectodermal cell | 1.05e-10 | 59 |
neuron | 1.10e-09 | 6 |
neuroblast | 1.10e-09 | 6 |
electrically signaling cell | 1.10e-09 | 6 |
oligodendrocyte | 1.65e-08 | 7 |
macroglial cell | 1.65e-08 | 7 |
astrocyte | 1.65e-08 | 7 |
oligodendrocyte precursor cell | 1.65e-08 | 7 |
embryonic stem cell | 5.16e-08 | 5 |
ectodermal cell | 9.50e-08 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.