FFCP PHASE1:Hg19::chr3:135974746..135974760,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8654 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000465176_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_PCCB_5end | |||
|id=chr3:135974746..135974760,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.65e-11;1!UBERON:0006222;3.94e-11;1!UBERON:0006601;2.66e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-35!57;UBERON:0005068!1.01e-35!57;UBERON:0006241!1.01e-35!57;UBERON:0007135!1.01e-35!57;UBERON:0002616!9.15e-30!59;UBERON:0002780!8.58e-29!41;UBERON:0001890!8.58e-29!41;UBERON:0006240!8.58e-29!41;UBERON:0003080!6.64e-28!42;UBERON:0002020!7.64e-28!34;UBERON:0003528!7.64e-28!34;UBERON:0001893!7.64e-28!34;UBERON:0007023!2.33e-27!115;UBERON:0000955!6.49e-27!69;UBERON:0006238!6.49e-27!69;UBERON:0001017!7.12e-27!82;UBERON:0002791!2.47e-26!33;UBERON:0000073!1.45e-25!94;UBERON:0001016!1.45e-25!94;UBERON:0005743!4.71e-25!86;UBERON:0002346!1.00e-24!90;UBERON:0001869!1.46e-24!32;UBERON:0003075!1.24e-23!86;UBERON:0007284!1.24e-23!86;UBERON:0002619!1.24e-19!22;UBERON:0003056!3.37e-19!61;UBERON:0001950!5.06e-17!20;UBERON:0000956!9.07e-17!25;UBERON:0000203!9.07e-17!25;UBERON:0000033!1.24e-13!123;UBERON:0002308!1.86e-13!9;UBERON:0000125!1.86e-13!9;UBERON:0000153!1.77e-12!129;UBERON:0007811!1.77e-12!129;UBERON:0000924!3.89e-12!173;UBERON:0006601!3.89e-12!173;UBERON:0004121!2.67e-11!169;UBERON:0000200!5.07e-11!6;UBERON:0009663!5.33e-10!7;UBERON:0000025!6.68e-10!194;UBERON:0002420!9.15e-10!9;UBERON:0007245!9.15e-10!9;UBERON:0010009!9.15e-10!9;UBERON:0010011!9.15e-10!9;UBERON:0000454!9.15e-10!9;UBERON:0003076!6.79e-09!15;UBERON:0003057!6.79e-09!15;UBERON:0002298!7.23e-09!8;UBERON:0004732!2.43e-08!13;UBERON:0004111!8.47e-08!241;UBERON:0006331!4.72e-07!3;UBERON:0000988!4.91e-07!3;UBERON:0000477!5.16e-07!286;UBERON:0004733!6.66e-07!12;UBERON:0002028!6.66e-07!12;UBERON:0007277!6.66e-07!12;UBERON:0002021!7.94e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;1.06e-28;3!UBERON:0000125;2.12e-26;9!UBERON:0002308;2.12e-26;9!UBERON:0002298;3.10e-25;6!UBERON:0000073;1.59e-22;53!UBERON:0002616;1.59e-22;53!UBERON:0005162;7.68e-21;2!UBERON:0000122;7.68e-21;2!UBERON:0001875;3.16e-20;2!UBERON:0006514;3.16e-20;2!UBERON:0001897;4.03e-20;2!UBERON:0010225;4.03e-20;2!UBERON:0002148;9.57e-20;2!UBERON:0006331;9.57e-20;2!UBERON:0009662;9.57e-20;2!UBERON:0002780;1.11e-18;41!UBERON:0001890;1.11e-18;41!UBERON:0004732;3.73e-18;13!UBERON:0002021;1.70e-17;5!UBERON:0003528;5.23e-15;34!UBERON:0002020;5.23e-15;34!UBERON:0001893;5.39e-14;34!UBERON:0007023;2.06e-13;114!UBERON:0009663;4.96e-13;7!UBERON:0001894;5.49e-13;7!UBERON:0001016;6.73e-13;83!UBERON:0004733;9.22e-13;12!UBERON:0002028;9.22e-13;12!UBERON:0002791;6.01e-12;32!UBERON:0002336;2.65e-11;1!UBERON:0000941;2.65e-11;1!UBERON:0001785;2.65e-11;1!UBERON:0002464;2.65e-11;1!UBERON:0004904;2.65e-11;1!UBERON:0011215;2.65e-11;1!UBERON:0001018;2.65e-11;1!UBERON:0001021;2.65e-11;1!UBERON:0002473;2.65e-11;1!UBERON:0005340;2.65e-11;1!UBERON:0003544;2.65e-11;1!UBERON:0005970;2.65e-11;1!UBERON:0002316;2.65e-11;1!UBERON:0001020;2.65e-11;1!UBERON:0002437;2.65e-11;1!UBERON:0000955;2.91e-11;68!UBERON:0002038;3.94e-11;1!UBERON:0009661;3.94e-11;1!UBERON:0002950;3.94e-11;1!UBERON:0001891;3.94e-11;1!UBERON:0002902;9.49e-11;1!UBERON:0009899;9.49e-11;1!UBERON:0001017;1.26e-10;75!UBERON:0002784;1.54e-10;4!UBERON:0002420;2.96e-10;9!UBERON:0007245;2.96e-10;9!UBERON:0010009;2.96e-10;9!UBERON:0010011;2.96e-10;9!UBERON:0000454;2.96e-10;9!UBERON:0002680;5.62e-10;9!UBERON:0001895;5.62e-10;9!UBERON:0001869;1.53e-08;32!UBERON:0001950;2.27e-07;20!UBERON:0002619;9.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.78e-40,56;UBERON:0005068,3.78e-40,56;UBERON:0006241,3.78e-40,56;UBERON:0007135,3.78e-40,56;UBERON:0000073,3.09e-37,53;UBERON:0002616,3.09e-37,53;UBERON:0000955,3.26e-32,68;UBERON:0006238,3.26e-32,68;UBERON:0001016,8.50e-31,89;UBERON:0003075,1.46e-30,82;UBERON:0007284,1.46e-30,82;UBERON:0001017,2.00e-30,81;UBERON:0002346,4.84e-29,86;UBERON:0000988,6.91e-29,3;UBERON:0007023,2.05e-27,114;UBERON:0000125,1.91e-26,9;UBERON:0002308,1.91e-26,9;UBERON:0002780,8.36e-26,41;UBERON:0001890,8.36e-26,41;UBERON:0003080,8.36e-26,41;UBERON:0006240,8.36e-26,41;UBERON:0002298,1.65e-25,6;UBERON:0010371,1.26e-23,104;UBERON:0005162,7.70e-21,2;UBERON:0000122,7.70e-21,2;UBERON:0003528,1.31e-20,34;UBERON:0002020,1.31e-20,34;UBERON:0001875,2.05e-20,2;UBERON:0006514,2.05e-20,2;UBERON:0003056,2.40e-20,61;UBERON:0001897,3.67e-20,2;UBERON:0010225,3.67e-20,2;UBERON:0002148,1.16e-19,2;UBERON:0006331,1.16e-19,2;UBERON:0009662,1.16e-19,2;UBERON:0004732,2.65e-18,13;UBERON:0010314,4.22e-18,132;UBERON:0002021,2.75e-17,5;UBERON:0001893,1.87e-16,34;UBERON:0003076,1.08e-15,15;UBERON:0003057,1.08e-15,15;UBERON:0004121,5.20e-15,171;UBERON:0000924,5.20e-15,171;UBERON:0006601,5.20e-15,171;UBERON:0002791,2.21e-13,32;UBERON:0000025,3.39e-13,192;UBERON:0009663,4.22e-13,7;UBERON:0001894,5.17e-13,7;UBERON:0006222,5.17e-13,7;UBERON:0004733,6.77e-13,12;UBERON:0002028,6.77e-13,12;UBERON:0007277,6.77e-13,12;UBERON:0002336,2.53e-11,1;UBERON:0011215,2.53e-11,1;UBERON:0001018,2.53e-11,1;UBERON:0002473,2.53e-11,1;UBERON:0005340,2.53e-11,1;UBERON:0003544,2.53e-11,1;UBERON:0005970,2.53e-11,1;UBERON:0002316,2.53e-11,1;UBERON:0001020,2.53e-11,1;UBERON:0002437,2.53e-11,1;UBERON:0000941,2.79e-11,1;UBERON:0001785,2.79e-11,1;UBERON:0002464,2.79e-11,1;UBERON:0004904,2.79e-11,1;UBERON:0001021,2.79e-11,1;UBERON:0003902,2.79e-11,1;UBERON:0005425,2.79e-11,1;UBERON:0002038,4.15e-11,1;UBERON:0009661,4.15e-11,1;UBERON:0002950,4.15e-11,1;UBERON:0001891,4.15e-11,1;UBERON:0009616,4.15e-11,1;UBERON:0010286,4.15e-11,1;UBERON:0011216,7.58e-11,223;UBERON:0002902,1.46e-10,1;UBERON:0009899,1.46e-10,1;UBERON:0002784,1.47e-10,4;UBERON:0002420,2.61e-10,9;UBERON:0007245,2.61e-10,9;UBERON:0010009,2.61e-10,9;UBERON:0010011,2.61e-10,9;UBERON:0000454,2.61e-10,9;UBERON:0002680,4.89e-10,9;UBERON:0001895,4.89e-10,9;UBERON:0010092,4.89e-10,9;UBERON:0004111,5.32e-10,240;UBERON:0001869,6.75e-10,32;UBERON:0000483,2.48e-08,306;UBERON:0000119,3.20e-08,309;UBERON:0001950,2.56e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.20598527610407,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,4.58327704268604,0,2.57690890297873,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,3.01191833562385,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.393915911536118,0.164831716762333,0,0,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.439656701034247,0,1.16354660725395,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0.332787154610557,1.8628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0.829550616910385,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,1.27707087245721,0.82046545696302,0,1.1756732918917,0.807378228159255,4.28308260777463,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.810451015420736,0.781078098613847,0,1.64881106504158,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,1.90315252335129,0.855046056317038,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,1.57046773691956,0.891139200981258,0,0,0,0,0,0,0,0,0,0,2.43677291357467,0,0.679914901909147,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0.752122617877125,0.909344378618873,2.94760543171796,1.65833887891756,2.1720929130998,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PCCB | |||
}} |
Revision as of 21:33, 21 January 2014
Short description: | p3@PCCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCCB_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 47bp_to_ENST00000465176_5end |
EntrezGene: | PCCB |
HGNC: | 8654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data