FFCP PHASE1:Hg19::chr18:74692006..74692017,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4155|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6925|TSSclassifier=S|UniProt=|association_with_transcript=-54bp_to_BC130034_5end|coexpression_cluster_id=C4|description=CAGE_peak_28_at_MBP_5end|id=chr18:74692006..74692017,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.35e-20;82!UBERON:0006241;6.23e-19;3!UBERON:0003057;6.23e-19;3!UBERON:0002532;4.59e-08;206!UBERON:0010316;4.59e-08;206!UBERON:0005425;1.50e-07;1!UBERON:0006222;2.84e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.82e-106!57;UBERON:0005068!1.82e-106!57;UBERON:0006241!1.82e-106!57;UBERON:0007135!1.82e-106!57;UBERON:0002616!1.30e-86!59;UBERON:0001017!2.82e-86!82;UBERON:0005743!6.40e-82!86;UBERON:0000955!2.03e-80!69;UBERON:0006238!2.03e-80!69;UBERON:0000073!2.69e-77!94;UBERON:0001016!2.69e-77!94;UBERON:0002780!5.28e-77!41;UBERON:0001890!5.28e-77!41;UBERON:0006240!5.28e-77!41;UBERON:0002020!4.69e-75!34;UBERON:0003528!4.69e-75!34;UBERON:0003080!4.86e-75!42;UBERON:0003075!5.54e-75!86;UBERON:0007284!5.54e-75!86;UBERON:0001893!8.09e-75!34;UBERON:0002791!2.29e-71!33;UBERON:0002346!2.84e-71!90;UBERON:0001869!2.79e-67!32;UBERON:0007023!1.61e-63!115;UBERON:0002619!1.86e-50!22;UBERON:0003056!9.29e-50!61;UBERON:0000033!3.89e-44!123;UBERON:0000956!4.06e-44!25;UBERON:0000203!4.06e-44!25;UBERON:0001950!9.06e-44!20;UBERON:0000153!1.09e-41!129;UBERON:0007811!1.09e-41!129;UBERON:0004121!2.45e-41!169;UBERON:0000924!3.57e-40!173;UBERON:0006601!3.57e-40!173;UBERON:0002308!2.25e-34!9;UBERON:0000125!2.25e-34!9;UBERON:0003076!7.30e-31!15;UBERON:0003057!7.30e-31!15;UBERON:0009663!1.37e-26!7;UBERON:0002420!1.58e-26!9;UBERON:0007245!1.58e-26!9;UBERON:0010009!1.58e-26!9;UBERON:0010011!1.58e-26!9;UBERON:0000454!1.58e-26!9;UBERON:0000025!3.67e-25!194;UBERON:0002298!6.24e-25!8;UBERON:0004732!8.11e-24!13;UBERON:0000200!7.37e-23!6;UBERON:0004733!2.59e-20!12;UBERON:0002028!2.59e-20!12;UBERON:0007277!2.59e-20!12;UBERON:0004111!1.81e-18!241;UBERON:0000483!3.73e-15!309;UBERON:0000369!3.74e-15!4;UBERON:0002435!3.74e-15!4;UBERON:0000204!3.74e-15!4;UBERON:0010082!3.74e-15!4;UBERON:0000477!4.01e-15!286;UBERON:0000119!6.46e-15!312;UBERON:0000064!1.11e-13!219;UBERON:0002240!1.54e-13!3;UBERON:0006331!1.75e-13!3;UBERON:0000988!2.85e-13!3;UBERON:0001896!3.49e-13!3;UBERON:0005290!3.49e-13!3;UBERON:0010096!3.49e-13!3;UBERON:0002021!4.99e-13!5;UBERON:0001872!6.81e-13!5;UBERON:0000349!1.77e-12!5;UBERON:0002771!2.87e-12!3;UBERON:0000475!2.91e-12!365;UBERON:0001871!5.62e-12!7;UBERON:0005383!1.14e-11!3;UBERON:0005382!1.14e-11!3;UBERON:0002680!7.84e-11!9;UBERON:0001895!7.84e-11!9;UBERON:0010092!7.84e-11!9;UBERON:0005162!1.01e-09!2;UBERON:0000122!1.01e-09!2;UBERON:0002148!1.60e-09!2;UBERON:0009662!1.60e-09!2;UBERON:0001875!2.95e-09!2;UBERON:0006514!2.95e-09!2;UBERON:0001897!3.20e-09!2;UBERON:0001954!1.19e-08!2;UBERON:0003022!1.19e-08!2;UBERON:0002421!1.19e-08!2;UBERON:0002600!1.19e-08!2;UBERON:0001870!1.56e-08!2;UBERON:0001873!2.38e-08!2;UBERON:0010122!2.38e-08!2;UBERON:0005174!2.81e-08!5;UBERON:0001137!2.81e-08!5;UBERON:0002360!4.36e-08!2;UBERON:0000094!4.36e-08!2;UBERON:0007645!4.36e-08!2;UBERON:0000062!9.16e-08!511|ontology_enrichment_uberon_v019=UBERON:0001893;1.10e-46;34!UBERON:0002780;1.53e-43;41!UBERON:0001890;1.53e-43;41!UBERON:0003528;2.87e-43;34!UBERON:0002020;2.87e-43;34!UBERON:0000073;9.59e-43;53!UBERON:0002616;9.59e-43;53!UBERON:0001869;4.49e-41;32!UBERON:0002791;2.68e-40;32!UBERON:0002619;2.02e-38;22!UBERON:0001950;6.41e-36;20!UBERON:0002298;3.97e-35;6!UBERON:0000956;1.08e-33;25!UBERON:0000203;1.08e-33;25!UBERON:0001017;1.19e-29;75!UBERON:0000955;4.35e-25;68!UBERON:0001016;1.79e-23;83!UBERON:0000125;4.32e-23;9!UBERON:0002308;4.32e-23;9!UBERON:0004732;1.16e-21;13!UBERON:0002240;6.23e-19;3!UBERON:0005174;6.23e-19;3!UBERON:0001137;6.23e-19;3!UBERON:0000988;1.39e-18;3!UBERON:0001896;2.43e-18;3!UBERON:0005290;2.43e-18;3!UBERON:0002021;3.18e-18;5!UBERON:0001872;6.26e-18;5!UBERON:0004733;2.60e-17;12!UBERON:0002028;2.60e-17;12!UBERON:0007023;5.07e-16;114!UBERON:0009663;1.55e-13;7!UBERON:0005162;2.43e-13;2!UBERON:0000122;2.43e-13;2!UBERON:0002148;4.04e-13;2!UBERON:0006331;4.04e-13;2!UBERON:0009662;4.04e-13;2!UBERON:0001875;1.01e-12;2!UBERON:0006514;1.01e-12;2!UBERON:0001897;1.24e-12;2!UBERON:0010225;1.24e-12;2!UBERON:0002420;1.48e-10;9!UBERON:0007245;1.48e-10;9!UBERON:0010009;1.48e-10;9!UBERON:0010011;1.48e-10;9!UBERON:0000454;1.48e-10;9!UBERON:0011216;6.88e-10;132!UBERON:0000200;3.66e-09;6!UBERON:0001894;4.48e-08;7!UBERON:0000941;1.50e-07;1!UBERON:0001785;1.50e-07;1!UBERON:0002464;1.50e-07;1!UBERON:0004904;1.50e-07;1!UBERON:0001021;1.50e-07;1!UBERON:0002336;1.80e-07;1!UBERON:0002038;1.80e-07;1!UBERON:0011215;1.80e-07;1!UBERON:0001018;1.80e-07;1!UBERON:0009661;1.80e-07;1!UBERON:0002950;1.80e-07;1!UBERON:000247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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6925 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_BC130034_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_28_at_MBP_5end | |||
|id=chr18:74692006..74692017,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-20;82!UBERON:0006241;6.23e-19;3!UBERON:0003057;6.23e-19;3!UBERON:0002532;4.59e-08;206!UBERON:0010316;4.59e-08;206!UBERON:0005425;1.50e-07;1!UBERON:0006222;2.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p28@MBP | |||
}} |
Revision as of 18:15, 11 September 2013
Short description: | p28@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -54bp_to_BC130034_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.