FFCP PHASE1:Hg19::chr1:177134024..177134052,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=460|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=773|TSSclassifier=S|UniProt=O14525,Q96BL7,E9PFR8,B1AJS1|association_with_transcript=0bp_to_NM_004319,NM_207108,uc001glb.1,uc001glc.2,uc001gld.1,uc009wwx.1_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_ASTN1_5end|id=chr1:177134024..177134052,-|ontology_enrichment_celltype=CL:0002319!8.32e-10!25;CL:0000047!6.86e-08!8;CL:0000133!2.05e-07!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,1.71e-07,8|ontology_enrichment_development_v019=UBERON:0006601;9.47e-19;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.47e-61!94;UBERON:0001016!7.47e-61!94;UBERON:0005743!2.08e-60!86;UBERON:0001017!4.39e-59!82;UBERON:0002346!2.77e-58!90;UBERON:0001049!5.16e-57!57;UBERON:0005068!5.16e-57!57;UBERON:0006241!5.16e-57!57;UBERON:0007135!5.16e-57!57;UBERON:0003075!1.26e-56!86;UBERON:0007284!1.26e-56!86;UBERON:0002616!3.72e-49!59;UBERON:0000955!4.11e-47!69;UBERON:0006238!4.11e-47!69;UBERON:0007023!9.76e-46!115;UBERON:0000924!8.90e-44!173;UBERON:0006601!8.90e-44!173;UBERON:0002780!1.08e-43!41;UBERON:0001890!1.08e-43!41;UBERON:0006240!1.08e-43!41;UBERON:0003080!2.93e-42!42;UBERON:0004121!5.67e-42!169;UBERON:0003056!1.05e-41!61;UBERON:0001893!1.28e-36!34;UBERON:0000153!1.90e-36!129;UBERON:0007811!1.90e-36!129;UBERON:0002020!2.16e-36!34;UBERON:0003528!2.16e-36!34;UBERON:0000033!4.78e-36!123;UBERON:0002791!1.92e-35!33;UBERON:0001869!9.15e-35!32;UBERON:0000956!5.05e-27!25;UBERON:0000203!5.05e-27!25;UBERON:0002619!1.21e-24!22;UBERON:0001950!1.62e-22!20;UBERON:0003076!2.66e-15!15;UBERON:0003057!2.66e-15!15;UBERON:0000922!2.27e-13!612;UBERON:0000475!2.27e-13!365;UBERON:0000025!6.46e-13!194;UBERON:0000064!1.38e-12!219;UBERON:0004733!2.09e-12!12;UBERON:0002028!2.09e-12!12;UBERON:0007277!2.09e-12!12;UBERON:0000119!4.92e-12!312;UBERON:0000477!5.27e-12!286;UBERON:0000483!5.50e-12!309;UBERON:0000481!7.52e-12!347;UBERON:0002420!3.77e-11!9;UBERON:0007245!3.77e-11!9;UBERON:0010009!3.77e-11!9;UBERON:0010011!3.77e-11!9;UBERON:0000454!3.77e-11!9;UBERON:0004732!3.81e-11!13;UBERON:0000468!4.96e-11!659;UBERON:0002308!1.03e-10!9;UBERON:0000125!1.03e-10!9;UBERON:0002050!1.47e-10!605;UBERON:0005423!1.47e-10!605;UBERON:0004111!1.64e-10!241;UBERON:0000923!3.99e-10!604;UBERON:0005291!3.99e-10!604;UBERON:0006598!3.99e-10!604;UBERON:0002532!3.99e-10!604;UBERON:0002680!1.41e-09!9;UBERON:0001895!1.41e-09!9;UBERON:0010092!1.41e-09!9;UBERON:0009663!7.52e-09!7;UBERON:0001894!2.33e-08!7;UBERON:0006222!2.33e-08!7;UBERON:0000200!3.04e-08!6;UBERON:0000062!3.22e-08!511;UBERON:0001871!3.83e-08!7;UBERON:0000467!3.93e-08!625;UBERON:0000480!4.77e-08!626;UBERON:0001872!3.45e-07!5;UBERON:0000349!3.71e-07!5;UBERON:0002021!4.33e-07!5;UBERON:0002298!6.64e-07!8|ontology_enrichment_uberon_v019=UBERON:0001893;2.33e-50;34!UBERON:0001869;6.54e-50;32!UBERON:0003528;9.02e-50;34!UBERON:0002020;9.02e-50;34!UBERON:0002791;1.60e-49;32!UBERON:0002780;1.94e-49;41!UBERON:0001890;1.94e-49;41!UBERON:0000073;1.89e-47;53!UBERON:0002616;1.89e-47;53!UBERON:0000956;6.68e-43;25!UBERON:0000203;6.68e-43;25!UBERON:0002619;3.69e-39;22!UBERON:0001950;1.01e-35;20!UBERON:0000955;9.38e-33;68!UBERON:0001017;2.04e-31;75!UBERON:0001016;1.46e-28;83!UBERON:0002420;5.66e-17;9!UBERON:0007245;5.66e-17;9!UBERON:0010009;5.66e-17;9!UBERON:0010011;5.66e-17;9!UBERON:0000454;5.66e-17;9!UBERON:0000125;2.82e-16;9!UBERON:0002308;2.82e-16;9!UBERON:0004733;9.04e-14;12!UBERON:0002028;9.04e-14;12!UBERON:0009663;2.86e-13;7!UBERON:0004732;1.59e-12;13!UBERON:0001894;1.75e-12;7!UBERON:0000200;2.72e-12;6!UBERON:0007023;4.13e-12;114!UBERON:0011216;6.21e-12;132!UBERON:0002298;7.46e-11;6!UBERON:0001871;8.38e-11;6!UBERON:0001872;1.28e-10;5!UBERON:0000349;1.42e-10;5!UBERON:0002021;1.78e-10;5!UBERON:0002680;2.15e-09;9!UBERON:0001895;2.15e-09;9!UBERON:0010314;4.10e-09;132!UBERON:0000369;4.27e-09;4!UBERON:0002435;4.27e-09;4!UBERON:0000204;4.27e-09;4!UBERON:0000922;9.95e-09;49!UBERON:0003296;6.38e-08;4!UBERON:0010133;6.38e-08;4!UBERON:0002784;6.92e-08;4!UBERON:0004121;2.26e-07;165!UBERON:0005383;2.85e-07;3!UBERON:0005382;2.85e-07;3!UBERON:0000488;2.99e-07;4!UBERON:0001870;6.23e-07;3!UBERON:0007625;7.74e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.73e-88,56;UBERON:0005068,7.73e-88,56;UBERON:0006241,7.73e-88,56;UBERON:0007135,7.73e-88,56;UBERON:0001016,2.98e-83,89;UBERON:0000073,9.60e-83,53;UBERON:0002616,9.60e-83,53;UBERON:0001017,5.02e-81,81;UBERON:0002346,1.19e-77,86;UBERON:0003075,1.24e-76,82;UBERON:0007284,1.24e-76,82;UBERON:0002780,5.17e-70,41;UBERON:0001890,5.17e-70,41;UBERON:0003080,5.17e-70,41;UBERON:0006240,5.17e-70,41;UBERON:0000955,8.09e-69,68;UBERON:0006238,8.09e-69,68;UBERON:0003056,6.69e-63,61;UBERON:0001893,1.50e-58,34;UBERON:0010371,2.52e-58,104;UBERON:0003528,3.51e-58,34;UBERON:0002020,3.51e-58,34;UBERON:0001869,1.51e-55,32;UBERON:0002791,4.93e-55,32;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=460 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=773 | |||
|TSSclassifier=S | |||
|UniProt=O14525,Q96BL7,E9PFR8,B1AJS1 | |||
|association_with_transcript=0bp_to_NM_004319,NM_207108,uc001glb.1,uc001glc.2,uc001gld.1,uc009wwx.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_ASTN1_5end | |||
|id=chr1:177134024..177134052,- | |||
|ontology_enrichment_celltype=CL:0002319!8.32e-10!25;CL:0000047!6.86e-08!8;CL:0000133!2.05e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.71e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.47e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@ASTN1 | |||
}} |
Revision as of 01:58, 12 September 2013
Short description: | p2@ASTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ASTN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_004319, NM_207108, uc001glb.1, uc001glc.2, uc001gld.1, uc009wwx.1_5end |
EntrezGene: | ASTN1 |
HGNC: | 773 |
UniProt: | O14525Q96BL7E9PFR8B1AJS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.71e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.