FFCP PHASE1:Hg19::chr4:166405567..166405604,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C946 | |||
|description=CAGE_peak_at_chr4:166405567..166405604,+ | |||
|id=chr4:166405567..166405604,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.33e-12;82!UBERON:0006215;1.08e-09;3!UBERON:0010122;5.41e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-39!57;UBERON:0005068!1.22e-39!57;UBERON:0006241!1.22e-39!57;UBERON:0007135!1.22e-39!57;UBERON:0001017!2.13e-39!82;UBERON:0005743!1.82e-37!86;UBERON:0007023!8.16e-37!115;UBERON:0002616!3.86e-35!59;UBERON:0000073!5.92e-34!94;UBERON:0001016!5.92e-34!94;UBERON:0000955!2.43e-33!69;UBERON:0006238!2.43e-33!69;UBERON:0003080!4.30e-33!42;UBERON:0002780!2.01e-32!41;UBERON:0001890!2.01e-32!41;UBERON:0006240!2.01e-32!41;UBERON:0002346!3.64e-29!90;UBERON:0003075!3.14e-28!86;UBERON:0007284!3.14e-28!86;UBERON:0002020!1.10e-26!34;UBERON:0003528!1.10e-26!34;UBERON:0001893!5.60e-26!34;UBERON:0002791!1.68e-25!33;UBERON:0001869!1.31e-24!32;UBERON:0000033!1.09e-23!123;UBERON:0000153!1.20e-23!129;UBERON:0007811!1.20e-23!129;UBERON:0003056!8.72e-23!61;UBERON:0002619!6.27e-21!22;UBERON:0000924!1.05e-20!173;UBERON:0006601!1.05e-20!173;UBERON:0004121!9.09e-20!169;UBERON:0001950!8.17e-19!20;UBERON:0000956!1.18e-18!25;UBERON:0000203!1.18e-18!25;UBERON:0000475!2.40e-13!365;UBERON:0000025!4.64e-13!194;UBERON:0004111!5.87e-12!241;UBERON:0000477!4.95e-11!286;UBERON:0002420!4.86e-10!9;UBERON:0007245!4.86e-10!9;UBERON:0010009!4.86e-10!9;UBERON:0010011!4.86e-10!9;UBERON:0000454!4.86e-10!9;UBERON:0002308!1.44e-09!9;UBERON:0000125!1.44e-09!9;UBERON:0001871!3.97e-09!7;UBERON:0000064!3.31e-08!219;UBERON:0009663!5.73e-08!7;UBERON:0003076!5.98e-08!15;UBERON:0003057!5.98e-08!15;UBERON:0004732!6.58e-08!13;UBERON:0001894!6.88e-08!7;UBERON:0006222!6.88e-08!7;UBERON:0002298!1.55e-07!8;UBERON:0000062!1.58e-07!511;UBERON:0000119!3.02e-07!312;UBERON:0004733!4.25e-07!12;UBERON:0002028!4.25e-07!12;UBERON:0007277!4.25e-07!12;UBERON:0000481!4.31e-07!347;UBERON:0000483!5.46e-07!309;UBERON:0000468!9.27e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.36e-35;41!UBERON:0001890;2.36e-35;41!UBERON:0002791;9.79e-33;32!UBERON:0003528;4.68e-32;34!UBERON:0002020;4.68e-32;34!UBERON:0000073;5.42e-31;53!UBERON:0002616;5.42e-31;53!UBERON:0001869;4.39e-30;32!UBERON:0001893;1.84e-27;34!UBERON:0001017;1.36e-24;75!UBERON:0002619;3.15e-24;22!UBERON:0000955;6.47e-24;68!UBERON:0002420;7.37e-24;9!UBERON:0007245;7.37e-24;9!UBERON:0010009;7.37e-24;9!UBERON:0010011;7.37e-24;9!UBERON:0000454;7.37e-24;9!UBERON:0000125;8.84e-23;9!UBERON:0002308;8.84e-23;9!UBERON:0000956;5.73e-21;25!UBERON:0000203;5.73e-21;25!UBERON:0001016;3.08e-20;83!UBERON:0001950;1.36e-19;20!UBERON:0009663;2.10e-18;7!UBERON:0001894;1.04e-17;7!UBERON:0000349;5.90e-15;5!UBERON:0001871;1.21e-14;6!UBERON:0004732;2.56e-12;13!UBERON:0007023;6.16e-12;114!UBERON:0000369;7.36e-12;4!UBERON:0002435;7.36e-12;4!UBERON:0000204;7.36e-12;4!UBERON:0003296;8.39e-11;4!UBERON:0010133;8.39e-11;4!UBERON:0002784;8.39e-11;4!UBERON:0004733;1.80e-10;12!UBERON:0002028;1.80e-10;12!UBERON:0011216;6.97e-10;132!UBERON:0005383;1.11e-09;3!UBERON:0005382;1.11e-09;3!UBERON:0002021;9.56e-09;5!UBERON:0002680;1.27e-07;9!UBERON:0001895;1.27e-07;9!UBERON:0001954;2.69e-07;2!UBERON:0003022;2.69e-07;2!UBERON:0002421;2.69e-07;2!UBERON:0002600;2.69e-07;2!UBERON:0002298;3.32e-07;6!UBERON:0001876;3.66e-07;2!UBERON:0002771;5.03e-07;2!UBERON:0001873;5.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.57e-61,56;UBERON:0005068,8.57e-61,56;UBERON:0006241,8.57e-61,56;UBERON:0007135,8.57e-61,56;UBERON:0000073,1.51e-57,53;UBERON:0002616,1.51e-57,53;UBERON:0001017,4.43e-56,81;UBERON:0001016,6.87e-52,89;UBERON:0000955,1.26e-50,68;UBERON:0006238,1.26e-50,68;UBERON:0002780,2.23e-48,41;UBERON:0001890,2.23e-48,41;UBERON:0003080,2.23e-48,41;UBERON:0006240,2.23e-48,41;UBERON:0003075,4.11e-48,82;UBERON:0007284,4.11e-48,82;UBERON:0002346,2.31e-45,86;UBERON:0003528,1.06e-39,34;UBERON:0002020,1.06e-39,34;UBERON:0010371,1.40e-37,104;UBERON:0007023,6.28e-36,114;UBERON:0002791,1.04e-35,32;UBERON:0003056,8.19e-35,61;UBERON:0001893,2.65e-33,34;UBERON:0001869,2.17e-32,32;UBERON:0010314,6.49e-29,132;UBERON:0004121,2.31e-28,171;UBERON:0000924,2.31e-28,171;UBERON:0006601,2.31e-28,171;UBERON:0002619,1.81e-24,22;UBERON:0002420,6.00e-24,9;UBERON:0007245,6.00e-24,9;UBERON:0010009,6.00e-24,9;UBERON:0010011,6.00e-24,9;UBERON:0000454,6.00e-24,9;UBERON:0000125,1.06e-22,9;UBERON:0002308,1.06e-22,9;UBERON:0011216,6.24e-22,223;UBERON:0000956,3.53e-21,25;UBERON:0000203,3.53e-21,25;UBERON:0001950,8.05e-20,20;UBERON:0009663,1.77e-18,7;UBERON:0001894,2.87e-18,7;UBERON:0006222,2.87e-18,7;UBERON:0000025,3.73e-16,192;UBERON:0000349,7.29e-15,5;UBERON:0001871,1.24e-14,6;UBERON:0003076,2.89e-13,15;UBERON:0003057,2.89e-13,15;UBERON:0004111,2.09e-12,240;UBERON:0004732,3.17e-12,13;UBERON:0000369,1.05e-11,4;UBERON:0002435,1.05e-11,4;UBERON:0000204,1.05e-11,4;UBERON:0010082,1.05e-11,4;UBERON:0003296,5.48e-11,4;UBERON:0010133,5.48e-11,4;UBERON:0002784,7.72e-11,4;UBERON:0000483,1.73e-10,306;UBERON:0004733,2.46e-10,12;UBERON:0002028,2.46e-10,12;UBERON:0007277,2.46e-10,12;UBERON:0000119,2.86e-10,309;UBERON:0005383,1.25e-09,3;UBERON:0005382,1.25e-09,3;UBERON:0002021,6.27e-09,5;UBERON:0000923,1.34e-07,560;UBERON:0010316,1.34e-07,560;UBERON:0005291,1.34e-07,560;UBERON:0006598,1.34e-07,560;UBERON:0010317,1.34e-07,560;UBERON:0002532,1.34e-07,560;UBERON:0002680,1.39e-07,9;UBERON:0001895,1.39e-07,9;UBERON:0010092,1.39e-07,9;UBERON:0002050,1.95e-07,564;UBERON:0001954,2.70e-07,2;UBERON:0003022,2.70e-07,2;UBERON:0002421,2.70e-07,2;UBERON:0002600,2.70e-07,2;UBERON:0001876,3.52e-07,2;UBERON:0005253,4.45e-07,2;UBERON:0002771,4.85e-07,2;UBERON:0002298,5.30e-07,6;UBERON:0001873,5.77e-07,2;UBERON:0010122,5.77e-07,2;UBERON:0000922,6.72e-07,592;UBERON:0005423,9.18e-07,581 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.422863212287913,2.00146596706261,0.893922188854576,0.872338524100369,0,2.52687949370732,0.261185628199839,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,2.86836620748814,0.354668382198357,0,0,0.74000264525148,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0.85422955527427,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,0,0.535286966391485,0.157702415033935,0,0.601892199455438,4.5481500811197,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,1.02511319404561,1.02341449813341,0.804269605718038,0,0,0,0,0,0,0.120859449591622,0,0.736647911487171,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.660075999364704,0,0,0,0,0,0.15350367472613,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,6.95903353436409,3.51673541026282,0,0,0,0.597743964753209,0,1.25966373927138,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,4.84666373047609,2.78304294485554,1.99613798001194,0,0,0.724999575434793,0.227586896570999,0,0,0.344743373241465,0.583209226766509,1.04174996959975,5.31444831488303,2.17073589525734,4.5774520895125,4.09143261745531,2.95547618953547,1.09692698576986,0,0,0.692552326534174,0.569710279235006,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.404406797884062,1.60515529459758,1.87411556580271,0,0,0,0,1.20990716048664,2.75465485467441,0.379119477770928,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.581934098930517,0,2.03382666702479,0,0,0.823040347426423,0,0,0,0.999048047910651,0,0,0.686379991447858,0,0,0,0,0,0,0,1.20084057741958,1.64286454670392,0,2.57859264851974,0.262887354279314,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.393915911536118,0.741742725430498,0.26961417541674,0,0,7.15706720828373,5.31193283835145,0.160753148465019,0.275078873194468,0,0,0,0.728994679896296,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0.714695326373367,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0,0.113312091520126,0.293104467356165,0,1.0342636508924,1.3223260174269,0,0,0,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,1.09937867375164,0.886068179966986,6.9554970994119,2.1282458220105,1.14681839138014,2.10765197920019,0.745156835296601,0.138348634936231,0,0,0,0.235265819698172,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0.53168342911599,0.521745061811734,0.300515217994437,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0.212574920101683,0.495743057036009,0,0,0,0.80057074828547,3.87943538059752,0,1.15612605173627,1.41696576325585,1.75597244962866,3.48697819209284,1.26035848110859,0.691572524642179,4.03689114079628,1.42769420259154,0.196295437002051,0,0,0,0.762764190934334,0,0.795664888465099,0.526472298444801,0.20170506870352,0,0,0,0,0.405225507710368,1.56215619722769,2.89361515101658,0.570742291745161,0.546974809018219,0,1.48863353516788,0.703484977438482,0,1.07140367175657,1.3451348888753,1.82089681270989,2.95960848756687,0,0,1.02892805662451,0.40781839786099,0.591954962065642,0,0,0.706437835654626,3.14231179832004,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0,0,0.414432328326074,0.6828739083758,2.07377898544228,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0.48571099305913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| |||
|short_description=p@chr4:166405567..166405604,+ | |||
}} |
Revision as of 03:51, 22 January 2014
Short description: | p@chr4:166405567..166405604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:166405567..166405604, + |
Coexpression cluster: | C946_medial_smallcell_hippocampus_occipital_amygdala_cerebellum_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data