FFCP PHASE1:Hg19::chr7:116660246..116660336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11351 | |||
|TSSclassifier=strong | |||
|UniProt=G3XAH9,B7Z4L1,C9JX79,C9JRW1,C9JZV9 | |||
|association_with_transcript=0bp_to_ENST00000393443,ENST00000393444,ENST00000393447,ENST00000434836,ENST00000462544,ENST00000465133,ENST00000467538,ENST00000477742,uc003vir.2,uc011knm.1_5end | |||
|description=CAGE_peak_3_at_ST7_5end | |||
|id=chr7:116660246..116660336,+ | |||
|ontology_enrichment_celltype=CL:0000393!8.50e-13!60;CL:0000211!8.50e-13!60;CL:0000183!9.40e-12!59;CL:0000187!1.62e-11!54;CL:0000192!2.25e-10!42;CL:0000514!2.25e-10!42;CL:0000680!3.85e-10!57;CL:0000056!3.85e-10!57;CL:0000355!3.85e-10!57;CL:0000359!5.07e-09!32;CL:0000055!1.03e-08!180;CL:0002139!5.93e-08!24;CL:0000222!4.39e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.81e-09;32!CL:0000192;1.43e-08;43!CL:0002139;4.72e-08;24!CL:0000187;1.06e-07;55!CL:0000393;3.09e-07;61!CL:0000211;3.09e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.46e-14,61;CL:0000211,3.46e-14,61;CL:0000187,2.32e-13,55;CL:0000680,8.15e-12,58;CL:0000056,8.15e-12,58;CL:0000355,8.15e-12,58;CL:0000192,8.50e-12,43;CL:0000514,8.50e-12,43;CL:0000359,4.71e-10,32;CL:0002139,4.61e-08,24;CL:0000222,9.05e-08,121 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.24e-10;82!CL:0000514;1.43e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.26e-35!82;UBERON:0000073!1.14e-34!94;UBERON:0001016!1.14e-34!94;UBERON:0005743!1.52e-33!86;UBERON:0002616!9.26e-31!59;UBERON:0001049!2.62e-30!57;UBERON:0005068!2.62e-30!57;UBERON:0006241!2.62e-30!57;UBERON:0007135!2.62e-30!57;UBERON:0000955!3.91e-30!69;UBERON:0006238!3.91e-30!69;UBERON:0000025!9.18e-27!194;UBERON:0003075!5.84e-25!86;UBERON:0007284!5.84e-25!86;UBERON:0002780!7.72e-25!41;UBERON:0001890!7.72e-25!41;UBERON:0006240!7.72e-25!41;UBERON:0000119!9.62e-25!312;UBERON:0004111!1.06e-24!241;UBERON:0002346!3.67e-24!90;UBERON:0003080!1.40e-23!42;UBERON:0000483!1.57e-23!309;UBERON:0004121!3.28e-22!169;UBERON:0000924!6.18e-22!173;UBERON:0006601!6.18e-22!173;UBERON:0000477!7.15e-22!286;UBERON:0001893!2.54e-21!34;UBERON:0002020!2.66e-21!34;UBERON:0003528!2.66e-21!34;UBERON:0007023!7.78e-21!115;UBERON:0002791!1.18e-20!33;UBERON:0001869!1.59e-20!32;UBERON:0000033!2.20e-20!123;UBERON:0000153!4.68e-20!129;UBERON:0007811!4.68e-20!129;UBERON:0003056!1.69e-19!61;UBERON:0002049!7.46e-18!79;UBERON:0007798!7.46e-18!79;UBERON:0000475!3.69e-17!365;UBERON:0000468!4.17e-17!659;UBERON:0000956!1.50e-16!25;UBERON:0000203!1.50e-16!25;UBERON:0002619!1.24e-15!22;UBERON:0000922!3.25e-15!612;UBERON:0000055!1.21e-14!69;UBERON:0001950!1.55e-14!20;UBERON:0002050!1.60e-14!605;UBERON:0005423!1.60e-14!605;UBERON:0000467!1.65e-14!625;UBERON:0000481!2.02e-14!347;UBERON:0000480!2.88e-14!626;UBERON:0004872!3.21e-14!84;UBERON:0000923!3.47e-14!604;UBERON:0005291!3.47e-14!604;UBERON:0006598!3.47e-14!604;UBERON:0002532!3.47e-14!604;UBERON:0001009!6.03e-14!113;UBERON:0004535!6.35e-14!110;UBERON:0001981!1.56e-13!60;UBERON:0007500!1.56e-13!60;UBERON:0004537!1.56e-13!60;UBERON:0006965!1.56e-13!60;UBERON:0001637!1.55e-11!42;UBERON:0003509!1.55e-11!42;UBERON:0004572!1.55e-11!42;UBERON:0002385!1.80e-11!63;UBERON:0001015!1.80e-11!63;UBERON:0000383!1.80e-11!63;UBERON:0001134!2.98e-11!61;UBERON:0002036!2.98e-11!61;UBERON:0003082!2.98e-11!61;UBERON:0004290!7.90e-10!70;UBERON:0000064!2.31e-09!219;UBERON:0004573!7.99e-09!33;UBERON:0004571!7.99e-09!33;UBERON:0000914!9.15e-09!83;UBERON:0002329!9.15e-09!83;UBERON:0003077!9.15e-09!83;UBERON:0003059!9.15e-09!83;UBERON:0007282!9.15e-09!83;UBERON:0009618!9.15e-09!83;UBERON:0007285!9.15e-09!83;UBERON:0003076!7.08e-08!15;UBERON:0003057!7.08e-08!15;UBERON:0000486!5.82e-07!82;UBERON:0004732!8.50e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.63e-22;32!UBERON:0001893;1.09e-21;34!UBERON:0003528;1.15e-21;34!UBERON:0002020;1.15e-21;34!UBERON:0002791;1.73e-21;32!UBERON:0002780;4.39e-21;41!UBERON:0001890;4.39e-21;41!UBERON:0000073;4.64e-20;53!UBERON:0002616;4.64e-20;53!UBERON:0000956;2.37e-19;25!UBERON:0000203;2.37e-19;25!UBERON:0002619;2.78e-18;22!UBERON:0001017;4.55e-17;75!UBERON:0001950;5.60e-17;20!UBERON:0000955;1.68e-16;68!UBERON:0001016;1.10e-14;83!UBERON:0001637;5.76e-10;42!UBERON:0003509;5.76e-10;42!UBERON:0004572;5.76e-10;42!UBERON:0007500;6.11e-09;56!UBERON:0001981;6.11e-09;56!UBERON:0004537;6.11e-09;56!UBERON:0004573;1.48e-08;33!UBERON:0004571;1.48e-08;33!UBERON:0000055;1.81e-08;65!UBERON:0002049;3.12e-08;75!UBERON:0007798;3.12e-08;75!UBERON:0011216;2.76e-07;132!UBERON:0002420;3.62e-07;9!UBERON:0007245;3.62e-07;9!UBERON:0010009;3.62e-07;9!UBERON:0010011;3.62e-07;9!UBERON:0000454;3.62e-07;9!UBERON:0004732;4.21e-07;13!UBERON:0000125;4.33e-07;9!UBERON:0002308;4.33e-07;9!UBERON:0000947;5.08e-07;21!UBERON:0010191;5.08e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.24e-41,89;UBERON:0001017,2.89e-40,81;UBERON:0001049,1.81e-36,56;UBERON:0005068,1.81e-36,56;UBERON:0006241,1.81e-36,56;UBERON:0007135,1.81e-36,56;UBERON:0000955,1.07e-35,68;UBERON:0006238,1.07e-35,68;UBERON:0000073,1.23e-34,53;UBERON:0002616,1.23e-34,53;UBERON:0003075,2.05e-30,82;UBERON:0007284,2.05e-30,82;UBERON:0000025,7.43e-30,192;UBERON:0002346,1.36e-29,86;UBERON:0002780,3.34e-29,41;UBERON:0001890,3.34e-29,41;UBERON:0003080,3.34e-29,41;UBERON:0006240,3.34e-29,41;UBERON:0004111,1.99e-26,240;UBERON:0000119,2.77e-25,309;UBERON:0001893,5.08e-25,34;UBERON:0003528,5.37e-25,34;UBERON:0002020,5.37e-25,34;UBERON:0001869,4.47e-24,32;UBERON:0000483,6.13e-24,306;UBERON:0002791,1.17e-23,32;UBERON:0004121,5.98e-23,171;UBERON:0000924,5.98e-23,171;UBERON:0006601,5.98e-23,171;UBERON:0003056,1.61e-22,61;UBERON:0007023,1.94e-21,114;UBERON:0010371,2.69e-21,104;UBERON:0010314,8.05e-21,132;UBERON:0005423,1.03e-19,581;UBERON:0000956,2.37e-19,25;UBERON:0000203,2.37e-19,25;UBERON:0000922,2.84e-19,592;UBERON:0000923,6.74e-19,560;UBERON:0010316,6.74e-19,560;UBERON:0005291,6.74e-19,560;UBERON:0006598,6.74e-19,560;UBERON:0010317,6.74e-19,560;UBERON:0002532,6.74e-19,560;UBERON:0002050,9.90e-19,564;UBERON:0002619,2.91e-18,22;UBERON:0002049,6.99e-18,78;UBERON:0007798,6.99e-18,78;UBERON:0011216,3.30e-17,223;UBERON:0001950,5.84e-17,20;UBERON:0000055,3.06e-15,68;UBERON:0004535,2.91e-14,109;UBERON:0007500,3.74e-14,59;UBERON:0001981,3.74e-14,59;UBERON:0004537,3.74e-14,59;UBERON:0006965,3.74e-14,59;UBERON:0001009,1.30e-13,112;UBERON:0002385,2.15e-13,64;UBERON:0001015,2.15e-13,64;UBERON:0000383,2.15e-13,64;UBERON:0001134,3.93e-13,62;UBERON:0002036,3.93e-13,62;UBERON:0003082,3.93e-13,62;UBERON:0001637,1.51e-12,42;UBERON:0003509,1.51e-12,42;UBERON:0004572,1.51e-12,42;UBERON:0004872,1.51e-12,83;UBERON:0007524,2.45e-11,73;UBERON:0003077,8.45e-11,72;UBERON:0007285,8.45e-11,72;UBERON:0002329,2.75e-10,71;UBERON:0003059,2.75e-10,71;UBERON:0007282,2.75e-10,71;UBERON:0004290,2.75e-10,71;UBERON:0009618,2.75e-10,71;UBERON:0004573,2.29e-09,33;UBERON:0004571,2.29e-09,33;UBERON:0007503,3.71e-09,78;UBERON:0003076,1.84e-08,15;UBERON:0003057,1.84e-08,15;UBERON:0000486,2.36e-07,83;UBERON:0004732,3.38e-07,13;UBERON:0002420,3.58e-07,9;UBERON:0007245,3.58e-07,9;UBERON:0010009,3.58e-07,9;UBERON:0010011,3.58e-07,9;UBERON:0000454,3.58e-07,9;UBERON:0000125,4.35e-07,9;UBERON:0002308,4.35e-07,9;UBERON:0000947,5.28e-07,21;UBERON:0010191,5.28e-07,21;UBERON:0004733,8.76e-07,12;UBERON:0002028,8.76e-07,12;UBERON:0007277,8.76e-07,12;UBERON:0003914,9.40e-07,117 | |||
|phase1_expression=0.54503513781167,0.642301571672949,3.24195129420734,5.00366491765652,1.34088328328186,5.23403114460221,0,0.631719873426831,0,1.96587149201207,0.697801167972428,7.42700665242586,10.0231451726812,0.866364470720326,0.662794751455832,6.72325146451775,7.8350288643117,5.84248072309899,5.36726078669558,2.83178433576612,0.612002073732759,1.88072832886853,9.15955158819382,2.73748850145768,14.9395741117815,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,2.01210257911091,1.79007586580942,0.361439152384566,0,0,0,0,4.25406677238305,3.76939975686359,4.30390449896318,7.98972360536047,0,0.370784442784429,0,0,0.132957960518865,0,0,0,11.1306948125355,2.58070378531837,4.51282652089873,3.39184765154406,5.45349267072878,6.05259692268148,8.98678356108286,2.84258435086262,2.13459757612026,9.70689777017544,20.9471244896756,4.56163263431108,13.1793511076012,8.45625084795498,12.9622711661082,1.25019619597712,0.898117490504679,0.788280363383256,4.5994991239765,9.49265659568129,7.69447324507711,0,0,0,0.496971951695318,4.43206790826029,3.04541115870403,5.16305917347865,0.709336764396714,0.560677600142307,14.9448594021587,3.94668077467456,0.311211035399766,2.69421344139376,2.94231425604226,7.26515652695671,9.21881479167998,0.234321431833797,0.624320153660641,1.71141546463335,0.298897361103602,0.704606991862589,0.323745888736263,0.561803226808994,0,0.859840221182376,0.516628905878827,0,0.247266929278557,2.73048408581408,0.718618141816238,0.841680569770331,1.12606667884768,0,1.75591048352335,0,0,3.97012641060074,0.358779271377724,0.213557388818567,0.847727604638247,0,0.206105058476878,0,0.18611685633159,0.843881661206331,0.0974370051611986,0.757301322732344,0.736399189138395,1.61646056818812,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0,0.132529768321485,0.69716365721711,2.17688215532278,0.504641701751257,0,0,1.92972281457866,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,4.20725321410337,2.057870056657,2.94017422771084,0,0,0,0,0,2.57351715447788,0.219500570817251,0,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,2.88662684050547,6.37617227362923,9.62751292733738,9.96128489551409,6.94478268864916,4.75635380586496,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.895585227028483,0.290633938513962,0.383382679165211,4.92663237895944,0.176096868026452,14.512968087854,11.8178361801908,15.4015768780184,16.5729504102561,4.96584953225761,19.926966025708,6.84289784090821,4.11309970813294,12.9147514872885,43.1597913272173,11.3252395188814,11.3349617896653,11.5141108738892,2.84397774667111,0,0,1.86156681609409,2.08014873822732,2.05765899409714,1.41849132023278,0.532844358032199,1.14382394926518,3.25572963234866,3.29296134712308,0,0,1.58390374586686,0,0,0.299918973546171,0,0,0,22.0454867052256,1.14861935834114,2.85273810081437,0.289562613335158,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,13.721109708013,80.6867093917255,40.2110182644402,67.5090549297425,49.1212838772936,0,0,0,1.47229790062968,2.00068208423871,0.271265023699736,0.415941723061614,0.178428988797162,0.315404830067869,0.585707074963566,0.902838299183157,2.27407504055985,0,2.65690239414175,1.47495334833363,0.434418072340414,2.93701736194111,2.40200396667599,0,0,0,0.909382714338778,19.9722527412596,3.93107381328584,1.24053903909388,0.920771839728375,0.841980283299221,1.66580894032411,1.53512174720011,2.0911009748669,5.93672265779964,0.771048469013278,1.06537035187876,1.8067974323038,1.03850885836724,0.929683027679674,0.120859449591622,0.200506470303285,0,0.459257792658427,1.63882051206045,2.22911505431021,1.35359883872224,1.38627606787947,1.56869953835371,0,0.633309773357254,0,0.850468526382578,3.02282282542995,0,1.35473218771926,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.824328093181778,0,0,0.574265537996172,0,0,1.35339005608971,2.15668063960502,2.30255512089194,3.85942402956686,5.04875150880886,3.33538396002726,3.06815858697963,6.58837063785856,0,0.192190067365106,0.127612712494584,0,0,5.35180989612088,4.1822236209636,8.93297382510658,7.45228442443831,3.47973196830029,9.266210955196,3.86437194203376,13.397701296948,14.8698329617801,2.85945290885737,3.32667128704734,2.1396949401696,0.95460974377781,9.41938368239076,3.05783177891635,3.0199073270966,2.5918728516051,6.06547444719948,3.17020642346017,2.52755073743389,2.92580243453754,1.70599442741899,3.16950440270266,1.36499911407986,1.41405431953713,1.13008116620243,5.51365343546124,1.99031692572366,5.26141062304515,1.15755106853338,3.9353685122798,10.7542499790233,7.74558745249375,6.19730325570931,4.87598597493775,4.91245205065606,7.84676313258751,5.32141596105897,0.844430541190656,1.97576935775941,0.75894634753143,0.699869440489966,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| |||
|short_description=p3@ST7 | |||
}} |
Revision as of 18:58, 22 January 2014
Short description: | p3@ST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ST7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393443, ENST00000393444, ENST00000393447, ENST00000434836, ENST00000462544, ENST00000465133, ENST00000467538, ENST00000477742, uc003vir.2, uc011knm.1_5end |
EntrezGene: | ST7 |
HGNC: | 11351 |
UniProt: | G3XAH9B7Z4L1C9JX79C9JRW1C9JZV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.46e-14 | 61 |
electrically active cell | 3.46e-14 | 61 |
muscle cell | 2.32e-13 | 55 |
muscle precursor cell | 8.15e-12 | 58 |
myoblast | 8.15e-12 | 58 |
multi-potent skeletal muscle stem cell | 8.15e-12 | 58 |
smooth muscle cell | 8.50e-12 | 43 |
smooth muscle myoblast | 8.50e-12 | 43 |
vascular associated smooth muscle cell | 4.71e-10 | 32 |
endothelial cell of vascular tree | 4.61e-08 | 24 |
mesodermal cell | 9.05e-08 | 121 |