FFCP PHASE1:Hg19::chr9:85896513..85896541,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24125 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465485_5end | |||
|description=CAGE_peak_3_at_FRMD3_5end | |||
|id=chr9:85896513..85896541,- | |||
|ontology_enrichment_celltype=CL:0002139!5.75e-13!24;CL:0000071!2.40e-10!18;CL:0002546!2.40e-10!18;CL:0000115!2.68e-10!35;CL:1000413!1.05e-08!9;CL:0002078!6.31e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000071;9.26e-20;18!CL:0002139;4.29e-14;24!CL:1000413;6.34e-14;9!CL:0002543;4.14e-12;6!CL:0000115;8.68e-11;36!CL:0002618;3.47e-09;3!CL:0002544;1.13e-07;6!CL:0000047;2.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.03e-19,18;CL:0002546,1.03e-19,18;CL:0002139,4.63e-14,24;CL:1000413,7.66e-14,9;CL:0002543,3.85e-12,6;CL:0000115,1.40e-11,36;CL:0000047,1.61e-09,8;CL:0002618,2.91e-09,3;CL:0002078,1.31e-08,45;CL:0002544,9.32e-08,6;CL:0000213,5.24e-07,58;CL:0000215,5.24e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.26e-20;18!UBERON:0006601;2.02e-16;82!UBERON:0010122;4.43e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.59e-40!57;UBERON:0005068!4.59e-40!57;UBERON:0006241!4.59e-40!57;UBERON:0007135!4.59e-40!57;UBERON:0007023!6.20e-40!115;UBERON:0002780!6.63e-38!41;UBERON:0001890!6.63e-38!41;UBERON:0006240!6.63e-38!41;UBERON:0001017!6.24e-37!82;UBERON:0003080!1.15e-36!42;UBERON:0000073!3.98e-35!94;UBERON:0001016!3.98e-35!94;UBERON:0005743!2.90e-34!86;UBERON:0002616!2.02e-32!59;UBERON:0002346!1.38e-31!90;UBERON:0002020!2.26e-31!34;UBERON:0003528!2.26e-31!34;UBERON:0001893!3.93e-31!34;UBERON:0002791!4.01e-30!33;UBERON:0003075!5.91e-30!86;UBERON:0007284!5.91e-30!86;UBERON:0000955!4.55e-29!69;UBERON:0006238!4.55e-29!69;UBERON:0001869!6.68e-29!32;UBERON:0003056!4.38e-23!61;UBERON:0000025!4.26e-22!194;UBERON:0000956!2.50e-21!25;UBERON:0000203!2.50e-21!25;UBERON:0000924!1.07e-20!173;UBERON:0006601!1.07e-20!173;UBERON:0004111!1.41e-20!241;UBERON:0004121!2.43e-19!169;UBERON:0002619!6.70e-19!22;UBERON:0000033!4.80e-17!123;UBERON:0000153!6.30e-17!129;UBERON:0007811!6.30e-17!129;UBERON:0001950!1.21e-16!20;UBERON:0000477!5.93e-15!286;UBERON:0000483!1.73e-12!309;UBERON:0000119!4.15e-12!312;UBERON:0002420!7.93e-12!9;UBERON:0007245!7.93e-12!9;UBERON:0010009!7.93e-12!9;UBERON:0010011!7.93e-12!9;UBERON:0000454!7.93e-12!9;UBERON:0002308!1.18e-11!9;UBERON:0000125!1.18e-11!9;UBERON:0001986!2.40e-10!18;UBERON:0004638!2.40e-10!18;UBERON:0004852!2.40e-10!18;UBERON:0000467!1.83e-09!625;UBERON:0000480!2.21e-09!626;UBERON:0000468!2.48e-09!659;UBERON:0009663!2.65e-09!7;UBERON:0003915!1.05e-08!9;UBERON:0004700!1.05e-08!9;UBERON:0001917!1.05e-08!9;UBERON:0000923!1.87e-08!604;UBERON:0005291!1.87e-08!604;UBERON:0006598!1.87e-08!604;UBERON:0002532!1.87e-08!604;UBERON:0002050!2.25e-08!605;UBERON:0005423!2.25e-08!605;UBERON:0000922!3.30e-08!612;UBERON:0004535!3.63e-08!110;UBERON:0001009!3.73e-08!113;UBERON:0001894!4.11e-08!7;UBERON:0006222!4.11e-08!7;UBERON:0002298!4.47e-08!8;UBERON:0000200!8.42e-08!6;UBERON:0000487!1.01e-07!22;UBERON:0001871!1.03e-07!7;UBERON:0000349!1.44e-07!5;UBERON:0000475!9.24e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.00e-42;34!UBERON:0003528;4.42e-41;34!UBERON:0002020;4.42e-41;34!UBERON:0002791;1.70e-40;32!UBERON:0001869;2.51e-40;32!UBERON:0002780;1.44e-38;41!UBERON:0001890;1.44e-38;41!UBERON:0002619;1.30e-33;22!UBERON:0000956;1.46e-32;25!UBERON:0000203;1.46e-32;25!UBERON:0000073;1.44e-31;53!UBERON:0002616;1.44e-31;53!UBERON:0001950;7.40e-29;20!UBERON:0001017;2.46e-20;75!UBERON:0004638;9.26e-20;18!UBERON:0001986;9.26e-20;18!UBERON:0004852;9.26e-20;18!UBERON:0002420;2.50e-19;9!UBERON:0007245;2.50e-19;9!UBERON:0010009;2.50e-19;9!UBERON:0010011;2.50e-19;9!UBERON:0000454;2.50e-19;9!UBERON:0000125;4.85e-19;9!UBERON:0002308;4.85e-19;9!UBERON:0001016;7.98e-18;83!UBERON:0000955;2.27e-17;68!UBERON:0000487;1.23e-15;22!UBERON:0000200;4.15e-15;6!UBERON:0000349;2.79e-14;5!UBERON:0009663;4.39e-14;7!UBERON:0003915;6.34e-14;9!UBERON:0004700;6.34e-14;9!UBERON:0001917;6.34e-14;9!UBERON:0006914;2.04e-13;25!UBERON:0002298;3.73e-12;6!UBERON:0007023;6.56e-11;114!UBERON:0001871;6.17e-10;6!UBERON:0001896;1.30e-09;3!UBERON:0005290;1.30e-09;3!UBERON:0001870;6.88e-09;3!UBERON:0000490;2.00e-08;33!UBERON:0002021;3.18e-08;5!UBERON:0001638;6.38e-08;9!UBERON:0003920;6.38e-08;9!UBERON:0004582;6.38e-08;9!UBERON:0004732;2.54e-07;13!UBERON:0001876;4.43e-07;2!UBERON:0001873;4.43e-07;2!UBERON:0011216;5.28e-07;132!UBERON:0000369;5.40e-07;4!UBERON:0002435;5.40e-07;4!UBERON:0000204;5.40e-07;4!UBERON:0001954;9.73e-07;2!UBERON:0002148;9.73e-07;2!UBERON:0006331;9.73e-07;2!UBERON:0009662;9.73e-07;2!UBERON:0003022;9.73e-07;2!UBERON:0002421;9.73e-07;2!UBERON:0002600;9.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.69e-60,89;UBERON:0001049,1.56e-59,56;UBERON:0005068,1.56e-59,56;UBERON:0006241,1.56e-59,56;UBERON:0007135,1.56e-59,56;UBERON:0000073,4.09e-56,53;UBERON:0002616,4.09e-56,53;UBERON:0001017,5.44e-56,81;UBERON:0002780,1.60e-53,41;UBERON:0001890,1.60e-53,41;UBERON:0003080,1.60e-53,41;UBERON:0006240,1.60e-53,41;UBERON:0003528,5.91e-50,34;UBERON:0002020,5.91e-50,34;UBERON:0001893,1.69e-49,34;UBERON:0002791,4.39e-45,32;UBERON:0001869,6.82e-45,32;UBERON:0000955,2.16e-43,68;UBERON:0006238,2.16e-43,68;UBERON:0002346,3.79e-42,86;UBERON:0003075,3.82e-42,82;UBERON:0007284,3.82e-42,82;UBERON:0003056,8.43e-36,61;UBERON:0007023,2.87e-34,114;UBERON:0002619,7.25e-34,22;UBERON:0000956,1.11e-32,25;UBERON:0000203,1.11e-32,25;UBERON:0010371,5.25e-31,104;UBERON:0001950,4.15e-29,20;UBERON:0004121,1.75e-28,171;UBERON:0000924,1.75e-28,171;UBERON:0006601,1.75e-28,171;UBERON:0000025,5.50e-28,192;UBERON:0010314,1.49e-23,132;UBERON:0011216,9.93e-21,223;UBERON:0004638,1.03e-19,18;UBERON:0001986,1.03e-19,18;UBERON:0004852,1.03e-19,18;UBERON:0004111,1.05e-19,240;UBERON:0002420,2.26e-19,9;UBERON:0007245,2.26e-19,9;UBERON:0010009,2.26e-19,9;UBERON:0010011,2.26e-19,9;UBERON:0000454,2.26e-19,9;UBERON:0000125,4.91e-19,9;UBERON:0002308,4.91e-19,9;UBERON:0000487,1.34e-15,22;UBERON:0000200,4.64e-15,6;UBERON:0000349,1.47e-14,5;UBERON:0000483,3.73e-14,306;UBERON:0009663,4.80e-14,7;UBERON:0000119,6.92e-14,309;UBERON:0003915,7.66e-14,9;UBERON:0004700,7.66e-14,9;UBERON:0001917,7.66e-14,9;UBERON:0006914,2.20e-13,25;UBERON:0002298,3.20e-12,6;UBERON:0001871,5.03e-10,6;UBERON:0001896,1.18e-09,3;UBERON:0005290,1.18e-09,3;UBERON:0010096,1.18e-09,3;UBERON:0005423,3.23e-09,581;UBERON:0001870,7.60e-09,3;UBERON:0000923,7.80e-09,560;UBERON:0010316,7.80e-09,560;UBERON:0005291,7.80e-09,560;UBERON:0006598,7.80e-09,560;UBERON:0010317,7.80e-09,560;UBERON:0002532,7.80e-09,560;UBERON:0000922,9.65e-09,592;UBERON:0002050,1.17e-08,564;UBERON:0003076,1.27e-08,15;UBERON:0003057,1.27e-08,15;UBERON:0002021,2.00e-08,5;UBERON:0001638,6.08e-08,9;UBERON:0003920,6.08e-08,9;UBERON:0004582,6.08e-08,9;UBERON:0004732,2.35e-07,13;UBERON:0001876,3.52e-07,2;UBERON:0000369,3.99e-07,4;UBERON:0002435,3.99e-07,4;UBERON:0000204,3.99e-07,4;UBERON:0010082,3.99e-07,4;UBERON:0001873,4.58e-07,2;UBERON:0010122,4.58e-07,2;UBERON:0007500,7.70e-07,59;UBERON:0001981,7.70e-07,59;UBERON:0004537,7.70e-07,59;UBERON:0006965,7.70e-07,59;UBERON:0002148,8.84e-07,2;UBERON:0006331,8.84e-07,2;UBERON:0009662,8.84e-07,2;UBERON:0001954,9.90e-07,2;UBERON:0003022,9.90e-07,2;UBERON:0002421,9.90e-07,2;UBERON:0002600,9.90e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.572471974262113,1.09499540058307,0.376627918784408,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,3.57772333260069,2.58070378531837,1.73570250803797,0,1.25849830862972,2.75118041940067,1.04497483268405,0.516833518338658,0,0.33472061276467,0,0,0,3.30896772311282,0.81014194788176,2.58969212023831,2.69435247151404,3.37834441449967,0,5.69559395740877,3.29763139074733,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0.622422070799533,0.808264032418128,0.817309515567294,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99972991182057,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0,0,0,0,0,11.9424473384558,5.20559415430487,5.41302168944387,6.1981018173709,3.18969375826582,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0.356128142586949,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26016233240486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.952927101831156,0.411362273086194,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,4.97073823883149,3.93874365949436,0,0,0,0.398495976502139,0,0,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,1.20598527610407,0,0,0,0,0,0,0,0,1.74962768029953,0,4.42870692906919,3.37670028151142,0,0,0,1.31631238292384,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,2.3590396543237,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,3.16553979779394,0,0,1.28071796843612,0,0,0,0,0,0,0.235694034616795,0,0,0,0,1.20084057741958,5.20240439789574,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.40508515278939,0,0,0,0,0.77380195455795,2.97672827624321,0,0.945668487590378,1.83591058472493,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,2.84422503995411,3.30581504356725,0,0,0.106787412567695,0,0,0,0,0,0,0,1.5041393641362,0,0.327872630709804,0,1.77213635993397,1.58634144372552,2.003054891304,3.44045517414043,3.99344585532668,3.10482014706917,0,0,0.909894705249887,0.856396000634902,0,0,0,0.149254802886874,0,0,0,0,0,0,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,1.79052119825112,3.88169321028054,0,2.83945059299236,0,0.212574920101683,3.34626563499306,0,0,0,0,0,0,1.99110597799025,1.41696576325585,1.75597244962866,1.8460472781668,0,1.45230230174858,1.29180516505481,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,1.41828927698629,0.781078098613847,3.10030194751776,1.58539525484767,0,0,0,0.175871244359621,0,0.535701835878287,1.00885116665647,1.82089681270989,0.682986574053893,0.177404740325278,0,0,0.543757863814654,1.38122824481983,0,0.111231401892069,0,0.785577949580009,0,0.913158720509496,0,3.8220135030964,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,2.55201007249429,3.56455680392503,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,2.15009374727177,0,2.65166811744567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,1.55149493792843,0.426467963801962,0.23806443146374,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@FRMD3 | |||
}} |
Revision as of 01:52, 23 January 2014
Short description: | p3@FRMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FRMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465485_5end |
EntrezGene: | FRMD3 |
HGNC: | 24125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.03e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.03e-19 | 18 |
endothelial cell of vascular tree | 4.63e-14 | 24 |
endothelial cell of artery | 7.66e-14 | 9 |
vein endothelial cell | 3.85e-12 | 6 |
endothelial cell | 1.40e-11 | 36 |
neuronal stem cell | 1.61e-09 | 8 |
endothelial cell of umbilical vein | 2.91e-09 | 3 |
meso-epithelial cell | 1.31e-08 | 45 |
aortic endothelial cell | 9.32e-08 | 6 |
lining cell | 5.24e-07 | 58 |
barrier cell | 5.24e-07 | 58 |