FFCP PHASE1:Hg19::chr2:20665905..20665909,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:20665905..20665909,- to FFCP PHASE1:Hg19::chr2:20665905..20665909,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:20665905..20665909,- | |||
|coexpression_cluster_id=C372 | |||
|description=CAGE_peak_at_chr2:20665905..20665909,- | |||
|id=chr2:20665905..20665909,- | |||
|ontology_enrichment_celltype=CL:0002605!5.33e-12!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.92e-12;3!UBERON:0003057;7.92e-12;3!UBERON:0006215;2.08e-11;3!UBERON:0005754;1.16e-09;1!UBERON:0006601;1.50e-09;82!UBERON:0008425;3.53e-09;1 | |||
|ontology_enrichment_disease=DOID:5093!1.03e-09!4;DOID:1612!1.03e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.94e-18;4!DOID:1612;1.94e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.94e-18,4;DOID:1612,1.94e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-83!57;UBERON:0005068!1.57e-83!57;UBERON:0006241!1.57e-83!57;UBERON:0007135!1.57e-83!57;UBERON:0002616!4.03e-71!59;UBERON:0000955!2.96e-66!69;UBERON:0006238!2.96e-66!69;UBERON:0001017!4.38e-65!82;UBERON:0005743!4.82e-65!86;UBERON:0003075!2.55e-62!86;UBERON:0007284!2.55e-62!86;UBERON:0000073!2.78e-61!94;UBERON:0001016!2.78e-61!94;UBERON:0002780!3.25e-60!41;UBERON:0001890!3.25e-60!41;UBERON:0006240!3.25e-60!41;UBERON:0002346!3.56e-59!90;UBERON:0003080!1.18e-58!42;UBERON:0007023!4.46e-53!115;UBERON:0002020!2.09e-52!34;UBERON:0003528!2.09e-52!34;UBERON:0001893!5.12e-52!34;UBERON:0002791!5.28e-49!33;UBERON:0001869!1.11e-45!32;UBERON:0003056!7.87e-45!61;UBERON:0000033!4.54e-38!123;UBERON:0000153!6.57e-36!129;UBERON:0007811!6.57e-36!129;UBERON:0004121!4.96e-34!169;UBERON:0000924!4.91e-33!173;UBERON:0006601!4.91e-33!173;UBERON:0000956!2.69e-29!25;UBERON:0000203!2.69e-29!25;UBERON:0002308!5.32e-27!9;UBERON:0000125!5.32e-27!9;UBERON:0003076!7.20e-25!15;UBERON:0003057!7.20e-25!15;UBERON:0002619!3.39e-21!22;UBERON:0002420!1.50e-20!9;UBERON:0007245!1.50e-20!9;UBERON:0010009!1.50e-20!9;UBERON:0010011!1.50e-20!9;UBERON:0000454!1.50e-20!9;UBERON:0004733!4.37e-20!12;UBERON:0002028!4.37e-20!12;UBERON:0007277!4.37e-20!12;UBERON:0000025!5.70e-20!194;UBERON:0009663!9.33e-20!7;UBERON:0001950!1.39e-19!20;UBERON:0004732!1.96e-18!13;UBERON:0002298!9.05e-18!8;UBERON:0004111!1.16e-16!241;UBERON:0000200!1.03e-15!6;UBERON:0000369!1.05e-15!4;UBERON:0002435!1.05e-15!4;UBERON:0000204!1.05e-15!4;UBERON:0010082!1.05e-15!4;UBERON:0002680!3.36e-15!9;UBERON:0001895!3.36e-15!9;UBERON:0010092!3.36e-15!9;UBERON:0000477!1.59e-13!286;UBERON:0006331!7.35e-13!3;UBERON:0000483!1.24e-12!309;UBERON:0000475!1.46e-12!365;UBERON:0005383!1.61e-12!3;UBERON:0005382!1.61e-12!3;UBERON:0000988!1.68e-12!3;UBERON:0002771!1.74e-12!3;UBERON:0000119!2.02e-12!312;UBERON:0000064!5.05e-12!219;UBERON:0001871!7.17e-12!7;UBERON:0001894!1.87e-09!7;UBERON:0006222!1.87e-09!7;UBERON:0001897!2.81e-09!2;UBERON:0002148!4.02e-09!2;UBERON:0009662!4.02e-09!2;UBERON:0001873!4.72e-09!2;UBERON:0010122!4.72e-09!2;UBERON:0000349!2.21e-07!5;UBERON:0001872!3.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.18e-30;53!UBERON:0002616;1.18e-30;53!UBERON:0002780;2.62e-23;41!UBERON:0001890;2.62e-23;41!UBERON:0003528;9.98e-20;34!UBERON:0002020;9.98e-20;34!UBERON:0002791;5.11e-19;32!UBERON:0001897;4.14e-17;2!UBERON:0010225;4.14e-17;2!UBERON:0004733;8.83e-17;12!UBERON:0002028;8.83e-17;12!UBERON:0001893;1.20e-16;34!UBERON:0001869;8.79e-16;32!UBERON:0004732;1.76e-15;13!UBERON:0000125;1.59e-14;9!UBERON:0002308;1.59e-14;9!UBERON:0000956;2.63e-14;25!UBERON:0000203;2.63e-14;25!UBERON:0002420;2.79e-14;9!UBERON:0007245;2.79e-14;9!UBERON:0010009;2.79e-14;9!UBERON:0010011;2.79e-14;9!UBERON:0000454;2.79e-14;9!UBERON:0001017;2.57e-13;75!UBERON:0002298;4.61e-13;6!UBERON:0001016;1.08e-12;83!UBERON:0000955;1.77e-12;68!UBERON:0002619;4.10e-12;22!UBERON:0001896;5.12e-12;3!UBERON:0005290;5.12e-12;3!UBERON:0002240;7.92e-12;3!UBERON:0005174;7.92e-12;3!UBERON:0001137;7.92e-12;3!UBERON:0006947;1.01e-11;3!UBERON:0004054;1.01e-11;3!UBERON:0001894;5.58e-11;7!UBERON:0009663;8.81e-11;7!UBERON:0000998;1.16e-09;1!UBERON:0006868;1.16e-09;1!UBERON:0001950;1.79e-09;20!UBERON:0002038;3.53e-09;1!UBERON:0001000;3.53e-09;1!UBERON:0009661;3.53e-09;1!UBERON:0002950;3.53e-09;1!UBERON:0005352;3.53e-09;1!UBERON:0001891;3.53e-09;1!UBERON:0005904;5.19e-09;4!UBERON:0002784;5.19e-09;4!UBERON:0002680;1.41e-08;9!UBERON:0001895;1.41e-08;9!UBERON:0000310;1.08e-07;10!UBERON:0007023;1.98e-07;114!UBERON:0000349;3.44e-07;5!UBERON:0001443;4.91e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-52,56;UBERON:0005068,1.05e-52,56;UBERON:0006241,1.05e-52,56;UBERON:0007135,1.05e-52,56;UBERON:0000073,8.54e-45,53;UBERON:0002616,8.54e-45,53;UBERON:0001017,3.67e-35,81;UBERON:0003075,3.67e-35,82;UBERON:0007284,3.67e-35,82;UBERON:0000955,7.48e-34,68;UBERON:0006238,7.48e-34,68;UBERON:0002346,2.16e-33,86;UBERON:0001016,2.15e-31,89;UBERON:0010371,4.58e-30,104;UBERON:0002780,8.07e-30,41;UBERON:0001890,8.07e-30,41;UBERON:0003080,8.07e-30,41;UBERON:0006240,8.07e-30,41;UBERON:0003528,8.78e-26,34;UBERON:0002020,8.78e-26,34;UBERON:0003076,1.40e-25,15;UBERON:0003057,1.40e-25,15;UBERON:0007023,1.06e-24,114;UBERON:0002791,1.57e-22,32;UBERON:0001893,3.73e-21,34;UBERON:0010314,1.15e-20,132;UBERON:0003056,1.79e-19,61;UBERON:0001869,3.19e-18,32;UBERON:0001897,3.38e-17,2;UBERON:0010225,3.38e-17,2;UBERON:0004121,9.67e-17,171;UBERON:0000924,9.67e-17,171;UBERON:0006601,9.67e-17,171;UBERON:0004733,1.01e-16,12;UBERON:0002028,1.01e-16,12;UBERON:0007277,1.01e-16,12;UBERON:0004732,1.99e-15,13;UBERON:0000125,1.01e-14,9;UBERON:0002308,1.01e-14,9;UBERON:0002420,2.11e-14,9;UBERON:0007245,2.11e-14,9;UBERON:0010009,2.11e-14,9;UBERON:0010011,2.11e-14,9;UBERON:0000454,2.11e-14,9;UBERON:0000956,3.31e-14,25;UBERON:0000203,3.31e-14,25;UBERON:0000025,3.72e-13,192;UBERON:0002298,4.81e-13,6;UBERON:0004111,1.81e-12,240;UBERON:0002619,5.02e-12,22;UBERON:0001896,5.42e-12,3;UBERON:0005290,5.42e-12,3;UBERON:0010096,5.42e-12,3;UBERON:0006947,8.83e-12,3;UBERON:0004054,8.83e-12,3;UBERON:0002240,9.83e-12,3;UBERON:0005174,9.83e-12,3;UBERON:0001137,9.83e-12,3;UBERON:0001894,4.95e-11,7;UBERON:0006222,4.95e-11,7;UBERON:0009663,5.68e-11,7;UBERON:0011216,1.18e-10,223;UBERON:0000998,1.03e-09,1;UBERON:0006868,1.03e-09,1;UBERON:0001950,1.92e-09,20;UBERON:0002038,2.35e-09,1;UBERON:0009661,2.35e-09,1;UBERON:0002950,2.35e-09,1;UBERON:0001891,2.35e-09,1;UBERON:0009616,2.35e-09,1;UBERON:0010286,2.35e-09,1;UBERON:0001000,3.25e-09,1;UBERON:0005352,3.25e-09,1;UBERON:0005904,4.69e-09,4;UBERON:0002784,4.69e-09,4;UBERON:0002680,1.53e-08,9;UBERON:0001895,1.53e-08,9;UBERON:0010092,1.53e-08,9;UBERON:0000483,6.84e-08,306;UBERON:0000119,8.87e-08,309;UBERON:0000310,1.08e-07,10;UBERON:0000349,4.86e-07,5;UBERON:0001443,4.91e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,1.31189999994294,0,0,0,0,0,0,0,0.885741385813839,2.89431452700979,1.52581736317083,1.21637185924347,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,5.42153667145029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,3.1297732676625,0,6.43388498913743,2.54595252059672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,2.23487402680012,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,3.10030194751776,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,2.73194629621557,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,12.1789024134105,0,0,0,0,0,0,0,0,0,0,1.72007499781742,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,3.10298987585686,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,1.31189999994294,0,0,0,0,0,0,0,0.885741385813839,2.89431452700979,1.52581736317083,1.21637185924347,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,5.42153667145029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,3.1297732676625,0,6.43388498913743,2.54595252059672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,2.23487402680012,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,3.10030194751776,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,2.73194629621557,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,12.1789024134105,0,0,0,0,0,0,0,0,0,0,1.72007499781742,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,3.10298987585686,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:20665905..20665909,- | |||
}} | }} |
Latest revision as of 05:22, 29 July 2015
Short description: | p@chr2:20665905..20665909, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20665905..20665909, - |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.94e-18 | 4 |
breast cancer | 1.94e-18 | 4 |