FFCP PHASE1:Hg19::chr3:147110145..147110180,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:147110145..147110180,-
|short_description=p4@ZIC4
|description=CAGE_peak_4_at_ZIC4_5end
|association_with_transcript=0bp_to_ENST00000472749_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84107 | |EntrezGene=84107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20393 | |HGNC=20393 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472749_5end | |||
|cluster_id=chr3:147110145..147110180,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_ZIC4_5end | |||
|id=chr3:147110145..147110180,- | |||
|ontology_enrichment_celltype=CL:0002620!8.90e-13!23 | |||
|ontology_enrichment_celltype_v019=CL:0000064;8.87e-11;3!CL:0002573;8.87e-11;2!CL:0000067;8.87e-11;3!CL:0005012;8.87e-11;3!CL:0002304;8.87e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,4.66e-11,2;CL:0000064,1.69e-10,3;CL:0000067,1.69e-10,3;CL:0005012,1.69e-10,3;CL:0002304,1.69e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.91e-24;3!UBERON:0006241;5.13e-11;3!UBERON:0003057;5.13e-11;3!UBERON:0005425;1.05e-08;1 | |||
|ontology_enrichment_disease=DOID:17!3.20e-07!5;DOID:450!3.20e-07!5;DOID:66!3.20e-07!5;DOID:423!3.20e-07!5;DOID:0080000!3.20e-07!5;DOID:11722!3.20e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.53e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.62e-42!57;UBERON:0005068!2.62e-42!57;UBERON:0006241!2.62e-42!57;UBERON:0007135!2.62e-42!57;UBERON:0003075!1.34e-40!86;UBERON:0007284!1.34e-40!86;UBERON:0000073!4.22e-40!94;UBERON:0001016!4.22e-40!94;UBERON:0002616!7.12e-40!59;UBERON:0001017!2.19e-38!82;UBERON:0002346!6.18e-38!90;UBERON:0005743!3.14e-37!86;UBERON:0000955!1.39e-36!69;UBERON:0006238!1.39e-36!69;UBERON:0002780!6.32e-25!41;UBERON:0001890!6.32e-25!41;UBERON:0006240!6.32e-25!41;UBERON:0004121!1.78e-24!169;UBERON:0003080!4.25e-24!42;UBERON:0000924!2.08e-23!173;UBERON:0006601!2.08e-23!173;UBERON:0003056!9.60e-23!61;UBERON:0000033!2.88e-22!123;UBERON:0001893!6.73e-21!34;UBERON:0003076!8.14e-21!15;UBERON:0003057!8.14e-21!15;UBERON:0002020!1.33e-20!34;UBERON:0003528!1.33e-20!34;UBERON:0000153!2.05e-20!129;UBERON:0007811!2.05e-20!129;UBERON:0002791!4.24e-20!33;UBERON:0001869!6.48e-19!32;UBERON:0007023!3.04e-18!115;UBERON:0004732!4.48e-18!13;UBERON:0004733!1.18e-16!12;UBERON:0002028!1.18e-16!12;UBERON:0007277!1.18e-16!12;UBERON:0000475!1.12e-13!365;UBERON:0002680!2.07e-12!9;UBERON:0001895!2.07e-12!9;UBERON:0010092!2.07e-12!9;UBERON:0002619!2.07e-12!22;UBERON:0000956!1.07e-11!25;UBERON:0000203!1.07e-11!25;UBERON:0002308!1.35e-11!9;UBERON:0000125!1.35e-11!9;UBERON:0001950!3.17e-10!20;UBERON:0000119!7.38e-10!312;UBERON:0009663!8.37e-10!7;UBERON:0002420!1.99e-09!9;UBERON:0007245!1.99e-09!9;UBERON:0010009!1.99e-09!9;UBERON:0010011!1.99e-09!9;UBERON:0000454!1.99e-09!9;UBERON:0002097!2.68e-09!40;UBERON:0002037!3.73e-09!6;UBERON:0006215!3.73e-09!6;UBERON:0000483!4.09e-09!309;UBERON:0002199!1.53e-08!45;UBERON:0002416!1.53e-08!45;UBERON:0002298!2.22e-08!8;UBERON:0005174!4.77e-08!5;UBERON:0001137!4.77e-08!5;UBERON:0000369!8.97e-07!4;UBERON:0002435!8.97e-07!4;UBERON:0000204!8.97e-07!4;UBERON:0010082!8.97e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;2.23e-36;13!UBERON:0004733;1.74e-30;12!UBERON:0002028;1.74e-30;12!UBERON:0001896;4.81e-23;3!UBERON:0005290;4.81e-23;3!UBERON:0002298;2.27e-20;6!UBERON:0002784;3.77e-17;4!UBERON:0001905;1.06e-15;2!UBERON:0005162;1.06e-15;2!UBERON:0000122;1.06e-15;2!UBERON:0002757;1.06e-15;2!UBERON:0010134;1.06e-15;2!UBERON:0005408;1.06e-15;2!UBERON:0001899;1.06e-15;2!UBERON:0000073;3.15e-15;53!UBERON:0002616;3.15e-15;53!UBERON:0002680;3.99e-14;9!UBERON:0001895;3.99e-14;9!UBERON:0002037;2.38e-12;6!UBERON:0001016;1.35e-11;83!UBERON:0002240;5.13e-11;3!UBERON:0005174;5.13e-11;3!UBERON:0001137;5.13e-11;3!UBERON:0001778;8.87e-11;3!UBERON:0001775;8.87e-11;3!UBERON:0000955;1.17e-10;68!UBERON:0001017;4.68e-10;75!UBERON:0001894;4.91e-10;7!UBERON:0002336;1.05e-08;1!UBERON:0000941;1.05e-08;1!UBERON:0001785;1.05e-08;1!UBERON:0002464;1.05e-08;1!UBERON:0004904;1.05e-08;1!UBERON:0011215;1.05e-08;1!UBERON:0001018;1.05e-08;1!UBERON:0001021;1.05e-08;1!UBERON:0002473;1.05e-08;1!UBERON:0005340;1.05e-08;1!UBERON:0003544;1.05e-08;1!UBERON:0005970;1.05e-08;1!UBERON:0002316;1.05e-08;1!UBERON:0001020;1.05e-08;1!UBERON:0002437;1.05e-08;1!UBERON:0003296;2.67e-08;4!UBERON:0010133;2.67e-08;4!UBERON:0000488;2.67e-08;4!UBERON:0000010;6.52e-08;8 | |||
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| ||
|short_description=p4@ZIC4 | |||
}} | }} |
Latest revision as of 18:01, 15 September 2015
Short description: | p4@ZIC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZIC4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000472749_5end |
EntrezGene: | ZIC4 |
HGNC: | 20393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 4.66e-11 | 2 |
ciliated cell | 1.69e-10 | 3 |
ciliated epithelial cell | 1.69e-10 | 3 |
multi-ciliated epithelial cell | 1.69e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.69e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.53e-08 | 1 |