FFCP PHASE1:Hg19::chr19:13617037..13617069,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1388 | |||
|TSSclassifier=strong | |||
|UniProt=E7EVF2,E9PD31 | |||
|association_with_transcript=0bp_to_ENST00000357018,ENST00000418012_5end | |||
|cluster_id=chr19:13617037..13617069,- | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_4_at_CACNA1A_5end | |||
|id=chr19:13617037..13617069,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.05e-16;82!UBERON:0006215;4.18e-16;3!UBERON:0010122;9.42e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.77e-74!57;UBERON:0005068!1.77e-74!57;UBERON:0006241!1.77e-74!57;UBERON:0007135!1.77e-74!57;UBERON:0002616!5.21e-62!59;UBERON:0001017!2.47e-61!82;UBERON:0005743!3.47e-60!86;UBERON:0000073!2.47e-57!94;UBERON:0001016!2.47e-57!94;UBERON:0002780!6.57e-57!41;UBERON:0001890!6.57e-57!41;UBERON:0006240!6.57e-57!41;UBERON:0003075!7.12e-56!86;UBERON:0007284!7.12e-56!86;UBERON:0000955!9.47e-56!69;UBERON:0006238!9.47e-56!69;UBERON:0003080!2.57e-55!42;UBERON:0002020!5.54e-55!34;UBERON:0003528!5.54e-55!34;UBERON:0001893!6.10e-55!34;UBERON:0002791!8.73e-53!33;UBERON:0002346!1.03e-52!90;UBERON:0001869!1.11e-51!32;UBERON:0002619!1.29e-43!22;UBERON:0007023!4.00e-40!115;UBERON:0001950!1.35e-39!20;UBERON:0000956!9.54e-38!25;UBERON:0000203!9.54e-38!25;UBERON:0003056!4.76e-37!61;UBERON:0000033!2.31e-34!123;UBERON:0000153!4.48e-32!129;UBERON:0007811!4.48e-32!129;UBERON:0004121!5.77e-30!169;UBERON:0000924!6.77e-29!173;UBERON:0006601!6.77e-29!173;UBERON:0003076!2.50e-19!15;UBERON:0003057!2.50e-19!15;UBERON:0002420!1.10e-18!9;UBERON:0007245!1.10e-18!9;UBERON:0010009!1.10e-18!9;UBERON:0010011!1.10e-18!9;UBERON:0000454!1.10e-18!9;UBERON:0002308!1.30e-18!9;UBERON:0000125!1.30e-18!9;UBERON:0000025!1.65e-17!194;UBERON:0009663!9.58e-15!7;UBERON:0000200!2.85e-14!6;UBERON:0004733!2.99e-14!12;UBERON:0002028!2.99e-14!12;UBERON:0007277!2.99e-14!12;UBERON:0000475!2.15e-13!365;UBERON:0000064!2.69e-13!219;UBERON:0001871!2.91e-13!7;UBERON:0004732!5.46e-13!13;UBERON:0002298!1.44e-12!8;UBERON:0002021!7.06e-12!5;UBERON:0000349!1.27e-11!5;UBERON:0001872!1.48e-11!5;UBERON:0004111!2.38e-11!241;UBERON:0000483!1.41e-10!309;UBERON:0000119!2.49e-10!312;UBERON:0000477!2.79e-10!286;UBERON:0000369!8.73e-10!4;UBERON:0002435!8.73e-10!4;UBERON:0000204!8.73e-10!4;UBERON:0010082!8.73e-10!4;UBERON:0002680!3.78e-09!9;UBERON:0001895!3.78e-09!9;UBERON:0010092!3.78e-09!9;UBERON:0000062!7.35e-08!511;UBERON:0002771!8.46e-08!3;UBERON:0005383!9.88e-08!3;UBERON:0005382!9.88e-08!3;UBERON:0000988!1.23e-07!3;UBERON:0001896!3.44e-07!3;UBERON:0005290!3.44e-07!3;UBERON:0010096!3.44e-07!3;UBERON:0002240!6.17e-07!3;UBERON:0006331!6.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.14e-81;32!UBERON:0003528;1.11e-80;34!UBERON:0002020;1.11e-80;34!UBERON:0002619;1.86e-78;22!UBERON:0002791;8.34e-76;32!UBERON:0001893;9.07e-73;34!UBERON:0001950;6.09e-70;20!UBERON:0000956;7.35e-69;25!UBERON:0000203;7.35e-69;25!UBERON:0002780;6.19e-53;41!UBERON:0001890;6.19e-53;41!UBERON:0000073;9.01e-51;53!UBERON:0002616;9.01e-51;53!UBERON:0000955;5.26e-38;68!UBERON:0001017;9.26e-33;75!UBERON:0000200;3.62e-29;6!UBERON:0002420;9.95e-25;9!UBERON:0007245;9.95e-25;9!UBERON:0010009;9.95e-25;9!UBERON:0010011;9.95e-25;9!UBERON:0000454;9.95e-25;9!UBERON:0001016;1.86e-24;83!UBERON:0000125;2.04e-24;9!UBERON:0002308;2.04e-24;9!UBERON:0004733;3.19e-24;12!UBERON:0002028;3.19e-24;12!UBERON:0002021;5.07e-24;5!UBERON:0000349;2.78e-23;5!UBERON:0004732;2.90e-22;13!UBERON:0000369;2.34e-19;4!UBERON:0002435;2.34e-19;4!UBERON:0000204;2.34e-19;4!UBERON:0002680;5.53e-19;9!UBERON:0001895;5.53e-19;9!UBERON:0002298;7.56e-19;6!UBERON:0001871;5.45e-17;6!UBERON:0009663;1.08e-16;7!UBERON:0001872;1.62e-15;5!UBERON:0001870;2.48e-15;3!UBERON:0005383;7.45e-15;3!UBERON:0005382;7.45e-15;3!UBERON:0007023;9.36e-15;114!UBERON:0000988;1.86e-14;3!UBERON:0002702;8.15e-11;2!UBERON:0002771;9.20e-11;2!UBERON:0001873;9.42e-11;2!UBERON:0001876;2.39e-10;2!UBERON:0011216;3.11e-10;132!UBERON:0001954;3.57e-10;2!UBERON:0003022;3.57e-10;2!UBERON:0002421;3.57e-10;2!UBERON:0002600;3.57e-10;2!UBERON:0002148;6.10e-10;2!UBERON:0006331;6.10e-10;2!UBERON:0009662;6.10e-10;2!UBERON:0002037;2.91e-08;6!UBERON:0010314;3.48e-08;132!UBERON:0001896;6.66e-07;3!UBERON:0005290;6.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.31e-101,53;UBERON:0002616,6.31e-101,53;UBERON:0001049,3.10e-95,56;UBERON:0005068,3.10e-95,56;UBERON:0006241,3.10e-95,56;UBERON:0007135,3.10e-95,56;UBERON:0003528,7.50e-93,34;UBERON:0002020,7.50e-93,34;UBERON:0001869,6.99e-92,32;UBERON:0001893,2.73e-86,34;UBERON:0000955,7.49e-86,68;UBERON:0006238,7.49e-86,68;UBERON:0002791,1.59e-84,32;UBERON:0002619,1.88e-78,22;UBERON:0002780,1.92e-76,41;UBERON:0001890,1.92e-76,41;UBERON:0003080,1.92e-76,41;UBERON:0006240,1.92e-76,41;UBERON:0001017,2.41e-75,81;UBERON:0001950,8.36e-70,20;UBERON:0000956,7.43e-69,25;UBERON:0000203,7.43e-69,25;UBERON:0001016,3.07e-67,89;UBERON:0003075,6.11e-67,82;UBERON:0007284,6.11e-67,82;UBERON:0002346,1.60e-63,86;UBERON:0010371,2.30e-51,104;UBERON:0003056,8.68e-50,61;UBERON:0007023,9.40e-50,114;UBERON:0010314,1.71e-41,132;UBERON:0004121,6.27e-34,171;UBERON:0000924,6.27e-34,171;UBERON:0006601,6.27e-34,171;UBERON:0000200,4.10e-29,6;UBERON:0000025,6.76e-28,192;UBERON:0011216,8.64e-26,223;UBERON:0002420,8.48e-25,9;UBERON:0007245,8.48e-25,9;UBERON:0010009,8.48e-25,9;UBERON:0010011,8.48e-25,9;UBERON:0000454,8.48e-25,9;UBERON:0000125,1.13e-24,9;UBERON:0002308,1.13e-24,9;UBERON:0004733,2.13e-24,12;UBERON:0002028,2.13e-24,12;UBERON:0007277,2.13e-24,12;UBERON:0002021,6.61e-24,5;UBERON:0000349,2.36e-23,5;UBERON:0004732,2.01e-22,13;UBERON:0004111,8.47e-21,240;UBERON:0000369,2.29e-19,4;UBERON:0002435,2.29e-19,4;UBERON:0000204,2.29e-19,4;UBERON:0010082,2.29e-19,4;UBERON:0003076,2.90e-19,15;UBERON:0003057,2.90e-19,15;UBERON:0002680,3.69e-19,9;UBERON:0001895,3.69e-19,9;UBERON:0010092,3.69e-19,9;UBERON:0002298,4.61e-19,6;UBERON:0001871,7.38e-17,6;UBERON:0009663,9.01e-17,7;UBERON:0001872,1.37e-15,5;UBERON:0001870,2.55e-15,3;UBERON:0005383,6.32e-15,3;UBERON:0005382,6.32e-15,3;UBERON:0000988,1.01e-14,3;UBERON:0000483,1.20e-14,306;UBERON:0000119,1.98e-14,309;UBERON:0002702,7.59e-11,2;UBERON:0001873,8.78e-11,2;UBERON:0010122,8.78e-11,2;UBERON:0002771,1.06e-10,2;UBERON:0001876,2.51e-10,2;UBERON:0001954,2.51e-10,2;UBERON:0003022,2.51e-10,2;UBERON:0002421,2.51e-10,2;UBERON:0002600,2.51e-10,2;UBERON:0002148,3.66e-10,2;UBERON:0006331,3.66e-10,2;UBERON:0009662,3.66e-10,2;UBERON:0002037,2.91e-08,6;UBERON:0006215,2.91e-08,6;UBERON:0001896,6.67e-07,3;UBERON:0005290,6.67e-07,3;UBERON:0010096,6.67e-07,3;UBERON:0000923,8.98e-07,560;UBERON:0010316,8.98e-07,560;UBERON:0005291,8.98e-07,560;UBERON:0006598,8.98e-07,560;UBERON:0010317,8.98e-07,560;UBERON:0002532,8.98e-07,560 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.538168907066586,0.427114777637135,0.211931901159562,0,0,0.515281080091258,0,0.337552664482532,0,0.757301322732344,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,1.27281299170375,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,3.97659059106519,1.1253553312841,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0.622079175323615,0,0,0,0,0,0,3.87733098438087,1.85536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,4.42870692906919,2.29133233388275,10.6807215421958,12.0531393325035,10.6397142823277,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48209377757333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.90684768556206,0,0,0,0,0,3.82722206945555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,3.29470915235301,2.50381861413,0.573409195690071,1.22021956690538,1.67660287941735,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,3.3399197050159,4.25089728976755,3.51194489925733,1.43581454968528,2.01657356977374,4.08027789538886,2.09918339321406,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,4.05225507710368,1.56215619722769,2.68692835451539,3.55128537085878,0.546974809018219,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0,0,0,3.80630504670258,4.34100305514804,0,0,0,1.57115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0.891139200981258,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,3.12760854878208,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CACNA1A | |||
}} |
Latest revision as of 01:10, 16 September 2015
Short description: | p4@CACNA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CACNA1A_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000357018, ENST00000418012_5end |
EntrezGene: | CACNA1A |
HGNC: | 1388 |
UniProt: | E7EVF2E9PD31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data