FFCP PHASE1:Hg19::chr5:161277707..161277761,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:161277707..161277761,+
|short_description=p4@GABRA1
|description=CAGE_peak_4_at_GABRA1_5end
|association_with_transcript=4bp_to_NM_001127648,uc010jjb.2_5en...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2554 | |EntrezGene=2554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |HGNC=4075 | ||
|TSSclassifier=strong | |||
|UniProt=P14867 | |UniProt=P14867 | ||
|association_with_transcript=4bp_to_NM_001127648,uc010jjb.2_5end | |||
|cluster_id=chr5:161277707..161277761,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_GABRA1_5end | |||
|id=chr5:161277707..161277761,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.37e-20;82!UBERON:0006215;3.29e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.04e-101!57;UBERON:0005068!1.04e-101!57;UBERON:0006241!1.04e-101!57;UBERON:0007135!1.04e-101!57;UBERON:0002616!4.81e-89!59;UBERON:0001017!1.21e-84!82;UBERON:0005743!1.10e-83!86;UBERON:0000955!1.40e-81!69;UBERON:0006238!1.40e-81!69;UBERON:0002780!7.31e-79!41;UBERON:0001890!7.31e-79!41;UBERON:0006240!7.31e-79!41;UBERON:0003080!8.07e-77!42;UBERON:0000073!7.95e-75!94;UBERON:0001016!7.95e-75!94;UBERON:0002020!5.00e-74!34;UBERON:0003528!5.00e-74!34;UBERON:0003075!5.51e-74!86;UBERON:0007284!5.51e-74!86;UBERON:0001893!6.22e-74!34;UBERON:0001869!1.75e-73!32;UBERON:0002346!2.26e-73!90;UBERON:0002791!1.03e-70!33;UBERON:0002619!1.03e-60!22;UBERON:0007023!3.24e-56!115;UBERON:0001950!8.31e-55!20;UBERON:0003056!1.03e-53!61;UBERON:0000956!5.01e-53!25;UBERON:0000203!5.01e-53!25;UBERON:0000033!4.89e-46!123;UBERON:0000153!1.62e-45!129;UBERON:0007811!1.62e-45!129;UBERON:0000924!1.30e-37!173;UBERON:0006601!1.30e-37!173;UBERON:0004121!4.96e-37!169;UBERON:0000025!1.55e-26!194;UBERON:0003076!1.61e-24!15;UBERON:0003057!1.61e-24!15;UBERON:0002420!5.31e-22!9;UBERON:0007245!5.31e-22!9;UBERON:0010009!5.31e-22!9;UBERON:0010011!5.31e-22!9;UBERON:0000454!5.31e-22!9;UBERON:0002308!5.79e-22!9;UBERON:0000125!5.79e-22!9;UBERON:0004733!2.75e-21!12;UBERON:0002028!2.75e-21!12;UBERON:0007277!2.75e-21!12;UBERON:0000200!4.81e-21!6;UBERON:0001871!5.18e-20!7;UBERON:0004732!1.64e-19!13;UBERON:0004111!3.51e-19!241;UBERON:0001872!3.11e-17!5;UBERON:0000349!1.13e-16!5;UBERON:0009663!5.32e-16!7;UBERON:0000477!2.13e-15!286;UBERON:0000483!3.79e-15!309;UBERON:0000119!6.85e-15!312;UBERON:0002298!2.56e-14!8;UBERON:0000064!1.92e-13!219;UBERON:0002680!2.21e-13!9;UBERON:0001895!2.21e-13!9;UBERON:0010092!2.21e-13!9;UBERON:0000369!5.83e-13!4;UBERON:0002435!5.83e-13!4;UBERON:0000204!5.83e-13!4;UBERON:0010082!5.83e-13!4;UBERON:0000475!7.70e-12!365;UBERON:0002021!2.00e-11!5;UBERON:0002771!2.80e-11!3;UBERON:0000988!9.04e-11!3;UBERON:0001896!2.83e-10!3;UBERON:0005290!2.83e-10!3;UBERON:0010096!2.83e-10!3;UBERON:0005383!5.89e-10!3;UBERON:0005382!5.89e-10!3;UBERON:0001870!2.34e-08!2;UBERON:0001876!7.26e-08!2;UBERON:0002148!8.03e-08!2;UBERON:0009662!8.03e-08!2;UBERON:0002360!1.51e-07!2;UBERON:0000094!1.51e-07!2;UBERON:0007645!1.51e-07!2;UBERON:0001875!1.61e-07!2;UBERON:0006514!1.61e-07!2;UBERON:0001894!1.67e-07!7;UBERON:0006222!1.67e-07!7;UBERON:0001954!1.72e-07!2;UBERON:0003022!1.72e-07!2;UBERON:0002421!1.72e-07!2;UBERON:0002600!1.72e-07!2;UBERON:0000481!2.64e-07!347;UBERON:0000062!2.84e-07!511;UBERON:0001897!3.51e-07!2;UBERON:0001873!3.98e-07!2;UBERON:0010122!3.98e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.34e-72;34!UBERON:0001869;7.86e-72;32!UBERON:0002619;4.80e-71;22!UBERON:0003528;2.31e-70;34!UBERON:0002020;2.31e-70;34!UBERON:0002791;1.40e-66;32!UBERON:0001950;1.57e-63;20!UBERON:0000956;2.85e-62;25!UBERON:0000203;2.85e-62;25!UBERON:0000073;3.23e-62;53!UBERON:0002616;3.23e-62;53!UBERON:0002780;1.57e-58;41!UBERON:0001890;1.57e-58;41!UBERON:0000955;2.35e-40;68!UBERON:0001017;2.34e-37;75!UBERON:0001016;7.89e-28;83!UBERON:0004733;3.37e-27;12!UBERON:0002028;3.37e-27;12!UBERON:0000200;1.45e-26;6!UBERON:0004732;5.56e-25;13!UBERON:0002298;2.35e-24;6!UBERON:0002420;1.04e-21;9!UBERON:0007245;1.04e-21;9!UBERON:0010009;1.04e-21;9!UBERON:0010011;1.04e-21;9!UBERON:0000454;1.04e-21;9!UBERON:0001872;1.04e-21;5!UBERON:0000125;1.14e-21;9!UBERON:0002308;1.14e-21;9!UBERON:0000349;5.80e-21;5!UBERON:0002680;5.19e-17;9!UBERON:0001895;5.19e-17;9!UBERON:0007023;2.38e-16;114!UBERON:0001871;1.66e-15;6!UBERON:0009663;2.05e-14;7!UBERON:0002021;2.45e-14;5!UBERON:0001870;2.64e-14;3!UBERON:0000988;2.19e-13;3!UBERON:0001896;9.90e-13;3!UBERON:0005290;9.90e-13;3!UBERON:0011216;5.77e-12;132!UBERON:0002702;4.46e-10;2!UBERON:0002771;5.21e-10;2!UBERON:0000369;1.07e-09;4!UBERON:0002435;1.07e-09;4!UBERON:0000204;1.07e-09;4!UBERON:0001876;1.17e-09;2!UBERON:0002148;1.33e-09;2!UBERON:0006331;1.33e-09;2!UBERON:0009662;1.33e-09;2!UBERON:0001875;3.17e-09;2!UBERON:0006514;3.17e-09;2!UBERON:0001954;3.75e-09;2!UBERON:0003022;3.75e-09;2!UBERON:0002421;3.75e-09;2!UBERON:0002600;3.75e-09;2!UBERON:0010314;3.69e-08;132!UBERON:0002037;2.64e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.07e-112,53;UBERON:0002616,3.07e-112,53;UBERON:0001049,1.95e-111,56;UBERON:0005068,1.95e-111,56;UBERON:0006241,1.95e-111,56;UBERON:0007135,1.95e-111,56;UBERON:0000955,2.41e-94,68;UBERON:0006238,2.41e-94,68;UBERON:0001017,1.20e-86,81;UBERON:0002780,1.01e-84,41;UBERON:0001890,1.01e-84,41;UBERON:0003080,1.01e-84,41;UBERON:0006240,1.01e-84,41;UBERON:0003528,4.00e-83,34;UBERON:0002020,4.00e-83,34;UBERON:0001893,5.21e-83,34;UBERON:0001869,4.91e-82,32;UBERON:0001016,2.54e-77,89;UBERON:0002791,2.00e-75,32;UBERON:0003075,7.04e-74,82;UBERON:0007284,7.04e-74,82;UBERON:0002619,4.54e-71,22;UBERON:0002346,4.31e-70,86;UBERON:0001950,1.57e-63,20;UBERON:0000956,2.72e-62,25;UBERON:0000203,2.72e-62,25;UBERON:0007023,9.29e-58,114;UBERON:0010371,1.29e-56,104;UBERON:0003056,4.38e-55,61;UBERON:0010314,1.85e-45,132;UBERON:0004121,9.75e-37,171;UBERON:0000924,9.75e-37,171;UBERON:0006601,9.75e-37,171;UBERON:0011216,6.77e-31,223;UBERON:0000025,1.67e-28,192;UBERON:0004733,3.27e-27,12;UBERON:0002028,3.27e-27,12;UBERON:0007277,3.27e-27,12;UBERON:0000200,1.36e-26,6;UBERON:0003076,3.07e-26,15;UBERON:0003057,3.07e-26,15;UBERON:0004732,5.41e-25,13;UBERON:0002298,2.25e-24,6;UBERON:0001872,1.09e-21,5;UBERON:0002420,1.09e-21,9;UBERON:0007245,1.09e-21,9;UBERON:0010009,1.09e-21,9;UBERON:0010011,1.09e-21,9;UBERON:0000454,1.09e-21,9;UBERON:0000125,1.20e-21,9;UBERON:0002308,1.20e-21,9;UBERON:0004111,4.42e-21,240;UBERON:0000349,5.68e-21,5;UBERON:0002680,5.19e-17,9;UBERON:0001895,5.19e-17,9;UBERON:0010092,5.19e-17,9;UBERON:0001871,1.58e-15,6;UBERON:0000483,1.18e-14,306;UBERON:0000119,1.99e-14,309;UBERON:0009663,2.14e-14,7;UBERON:0002021,2.46e-14,5;UBERON:0001870,2.64e-14,3;UBERON:0000988,2.20e-13,3;UBERON:0001896,9.50e-13,3;UBERON:0005290,9.50e-13,3;UBERON:0010096,9.50e-13,3;UBERON:0002702,4.46e-10,2;UBERON:0002771,5.09e-10,2;UBERON:0000369,1.10e-09,4;UBERON:0002435,1.10e-09,4;UBERON:0000204,1.10e-09,4;UBERON:0010082,1.10e-09,4;UBERON:0001876,1.17e-09,2;UBERON:0002148,1.33e-09,2;UBERON:0006331,1.33e-09,2;UBERON:0009662,1.33e-09,2;UBERON:0001875,3.24e-09,2;UBERON:0006514,3.24e-09,2;UBERON:0001954,3.53e-09,2;UBERON:0003022,3.53e-09,2;UBERON:0002421,3.53e-09,2;UBERON:0002600,3.53e-09,2;UBERON:0002037,2.64e-07,6;UBERON:0006215,2.64e-07,6;UBERON:0000923,8.08e-07,560;UBERON:0010316,8.08e-07,560;UBERON:0005291,8.08e-07,560;UBERON:0006598,8.08e-07,560;UBERON:0010317,8.08e-07,560;UBERON:0002532,8.08e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7600535584182,4.50142132513641,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,16.4786566836187,24.1197055220813,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,51.8777903478083,18.4667364085145,47.2876190325676,26.5456330556307,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,27.1746757041393,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,42.6714764742622,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,9.60672461935663,3.14882371451584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,4.63091580779357,0,0,0.415440338029185,0,0,19.1968599039358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0996138906171,18.777029447462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.2018634771608,52.7153464376481,22.033603804344,4.0138643698305,2.44043913381075,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2179226250906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,17.2134323258512,75.09918545256,6.5449882213432,36.3055964706136,0,17.9117283882324,24.0598711991458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8363298938157,45.3025297196032,23.7689815976362,31.32741023579,1.09394961803644,0,0,0,0,0,1.00885116665647,0,0,0,0,0,5.64148783707703,24.9936539538826,0,0,0,2.35673384874003,0,0,0,0,0.214429632529969,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,1.17785080268967,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,17.9497534104015,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,14.925049910258,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7600535584182,4.50142132513641,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,16.4786566836187,24.1197055220813,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,51.8777903478083,18.4667364085145,47.2876190325676,26.5456330556307,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,27.1746757041393,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,42.6714764742622,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,9.60672461935663,3.14882371451584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,4.63091580779357,0,0,0.415440338029185,0,0,19.1968599039358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0996138906171,18.777029447462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.2018634771608,52.7153464376481,22.033603804344,4.0138643698305,2.44043913381075,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2179226250906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,17.2134323258512,75.09918545256,6.5449882213432,36.3055964706136,0,17.9117283882324,24.0598711991458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8363298938157,45.3025297196032,23.7689815976362,31.32741023579,1.09394961803644,0,0,0,0,0,1.00885116665647,0,0,0,0,0,5.64148783707703,24.9936539538826,0,0,0,2.35673384874003,0,0,0,0,0.214429632529969,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,1.17785080268967,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,17.9497534104015,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,14.925049910258,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@GABRA1 | |||
}} | }} |
Latest revision as of 17:25, 16 September 2015
Short description: | p4@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 4bp_to_NM_001127648, uc010jjb.2_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data