FFCP PHASE1:Hg19::chr20:4804008..4804023,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:4804008..4804023,- to FFCP PHASE1:Hg19::chr20:4804008..4804023,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9770 | |EntrezGene=9770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9883 | |HGNC=9883 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_ENST00000474232,uc002wle.2_5end | |||
|cluster_id=chr20:4804008..4804023,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_RASSF2_5end | |||
|id=chr20:4804008..4804023,- | |||
|ontology_enrichment_celltype=CL:0002057!1.29e-07!42;CL:0000860!1.00e-06!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.95e-21;82!UBERON:0006241;6.66e-10;3!UBERON:0003057;6.66e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.36e-54!57;UBERON:0005068!6.36e-54!57;UBERON:0006241!6.36e-54!57;UBERON:0007135!6.36e-54!57;UBERON:0007023!1.55e-44!115;UBERON:0002616!2.76e-44!59;UBERON:0002780!3.10e-42!41;UBERON:0001890!3.10e-42!41;UBERON:0006240!3.10e-42!41;UBERON:0001017!3.16e-42!82;UBERON:0005743!5.14e-41!86;UBERON:0003080!6.95e-41!42;UBERON:0000955!7.40e-40!69;UBERON:0006238!7.40e-40!69;UBERON:0001893!3.35e-39!34;UBERON:0002020!4.14e-39!34;UBERON:0003528!4.14e-39!34;UBERON:0002791!5.89e-38!33;UBERON:0000073!7.68e-37!94;UBERON:0001016!7.68e-37!94;UBERON:0003075!1.09e-36!86;UBERON:0007284!1.09e-36!86;UBERON:0001869!1.71e-36!32;UBERON:0002346!3.92e-34!90;UBERON:0002619!4.83e-28!22;UBERON:0000956!6.98e-28!25;UBERON:0000203!6.98e-28!25;UBERON:0003056!1.18e-26!61;UBERON:0001950!1.22e-25!20;UBERON:0000033!5.50e-19!123;UBERON:0000153!3.31e-18!129;UBERON:0007811!3.31e-18!129;UBERON:0004121!4.33e-15!169;UBERON:0000924!2.74e-14!173;UBERON:0006601!2.74e-14!173;UBERON:0000025!9.81e-14!194;UBERON:0003076!1.07e-13!15;UBERON:0003057!1.07e-13!15;UBERON:0002308!1.33e-12!9;UBERON:0000125!1.33e-12!9;UBERON:0002420!2.08e-12!9;UBERON:0007245!2.08e-12!9;UBERON:0010009!2.08e-12!9;UBERON:0010011!2.08e-12!9;UBERON:0000454!2.08e-12!9;UBERON:0004732!1.80e-11!13;UBERON:0001871!1.37e-10!7;UBERON:0004111!2.51e-10!241;UBERON:0004733!3.28e-10!12;UBERON:0002028!3.28e-10!12;UBERON:0007277!3.28e-10!12;UBERON:0009663!3.67e-10!7;UBERON:0002298!8.08e-09!8;UBERON:0000200!1.52e-08!6;UBERON:0000062!7.61e-08!511;UBERON:0000477!7.89e-08!286;UBERON:0001872!1.74e-07!5;UBERON:0000349!1.74e-07!5;UBERON:0002021!2.34e-07!5;UBERON:0002680!9.28e-07!9;UBERON:0001895!9.28e-07!9;UBERON:0010092!9.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.34e-62;34!UBERON:0002020;5.34e-62;34!UBERON:0001893;3.18e-61;34!UBERON:0002791;2.38e-60;32!UBERON:0001869;3.01e-60;32!UBERON:0002619;4.83e-56;22!UBERON:0002780;7.39e-55;41!UBERON:0001890;7.39e-55;41!UBERON:0001950;1.17e-50;20!UBERON:0000073;2.76e-50;53!UBERON:0002616;2.76e-50;53!UBERON:0000956;7.44e-49;25!UBERON:0000203;7.44e-49;25!UBERON:0000955;3.54e-32;68!UBERON:0001017;6.59e-32;75!UBERON:0001016;2.81e-29;83!UBERON:0000125;4.05e-26;9!UBERON:0002308;4.05e-26;9!UBERON:0002420;1.21e-25;9!UBERON:0007245;1.21e-25;9!UBERON:0010009;1.21e-25;9!UBERON:0010011;1.21e-25;9!UBERON:0000454;1.21e-25;9!UBERON:0009663;1.29e-20;7!UBERON:0002298;2.71e-18;6!UBERON:0004732;5.04e-18;13!UBERON:0000200;3.76e-17;6!UBERON:0007023;2.27e-16;114!UBERON:0004733;2.10e-15;12!UBERON:0002028;2.10e-15;12!UBERON:0001872;8.06e-15;5!UBERON:0000349;9.45e-15;5!UBERON:0001871;1.08e-14;6!UBERON:0002021;1.68e-14;5!UBERON:0000369;7.24e-12;4!UBERON:0002435;7.24e-12;4!UBERON:0000204;7.24e-12;4!UBERON:0011216;1.16e-11;132!UBERON:0000988;5.09e-10;3!UBERON:0010314;5.14e-10;132!UBERON:0001896;5.48e-10;3!UBERON:0005290;5.48e-10;3!UBERON:0002240;6.66e-10;3!UBERON:0005174;6.66e-10;3!UBERON:0001137;6.66e-10;3!UBERON:0005383;3.88e-09;3!UBERON:0005382;3.88e-09;3!UBERON:0001870;4.11e-09;3!UBERON:0002680;1.74e-08;9!UBERON:0001895;1.74e-08;9!UBERON:0005162;1.00e-07;2!UBERON:0000122;1.00e-07;2!UBERON:0001875;1.48e-07;2!UBERON:0006514;1.48e-07;2!UBERON:0001897;1.78e-07;2!UBERON:0010225;1.78e-07;2!UBERON:0002784;2.27e-07;4!UBERON:0001894;3.18e-07;7!UBERON:0002148;3.39e-07;2!UBERON:0006331;3.39e-07;2!UBERON:0009662;3.39e-07;2!UBERON:0001954;5.72e-07;2!UBERON:0003022;5.72e-07;2!UBERON:0002421;5.72e-07;2!UBERON:0002600;5.72e-07;2!UBERON:0002771;6.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.81e-101,56;UBERON:0005068,2.81e-101,56;UBERON:0006241,2.81e-101,56;UBERON:0007135,2.81e-101,56;UBERON:0000073,6.66e-93,53;UBERON:0002616,6.66e-93,53;UBERON:0001017,3.51e-79,81;UBERON:0002780,2.00e-78,41;UBERON:0001890,2.00e-78,41;UBERON:0003080,2.00e-78,41;UBERON:0006240,2.00e-78,41;UBERON:0000955,1.58e-76,68;UBERON:0006238,1.58e-76,68;UBERON:0001893,7.43e-74,34;UBERON:0003528,1.16e-73,34;UBERON:0002020,1.16e-73,34;UBERON:0001016,1.40e-73,89;UBERON:0003075,2.48e-72,82;UBERON:0007284,2.48e-72,82;UBERON:0002346,2.00e-68,86;UBERON:0002791,4.51e-68,32;UBERON:0001869,6.97e-68,32;UBERON:0010371,4.75e-57,104;UBERON:0003056,1.49e-56,61;UBERON:0002619,4.23e-56,22;UBERON:0007023,2.78e-54,114;UBERON:0001950,1.06e-50,20;UBERON:0000956,6.63e-49,25;UBERON:0000203,6.63e-49,25;UBERON:0010314,1.57e-48,132;UBERON:0004121,1.59e-37,171;UBERON:0000924,1.59e-37,171;UBERON:0006601,1.59e-37,171;UBERON:0011216,6.31e-27,223;UBERON:0000125,2.98e-26,9;UBERON:0002308,2.98e-26,9;UBERON:0002420,8.08e-26,9;UBERON:0007245,8.08e-26,9;UBERON:0010009,8.08e-26,9;UBERON:0010011,8.08e-26,9;UBERON:0000454,8.08e-26,9;UBERON:0003076,9.19e-23,15;UBERON:0003057,9.19e-23,15;UBERON:0000025,1.44e-22,192;UBERON:0009663,8.83e-21,7;UBERON:0002298,2.68e-18,6;UBERON:0004732,5.16e-18,13;UBERON:0000200,3.61e-17,6;UBERON:0004111,1.29e-16,240;UBERON:0004733,2.14e-15,12;UBERON:0002028,2.14e-15,12;UBERON:0007277,2.14e-15,12;UBERON:0001872,8.31e-15,5;UBERON:0000349,8.31e-15,5;UBERON:0001871,1.07e-14,6;UBERON:0002021,1.61e-14,5;UBERON:0000483,7.17e-13,306;UBERON:0000119,1.26e-12,309;UBERON:0000369,5.14e-12,4;UBERON:0002435,5.14e-12,4;UBERON:0000204,5.14e-12,4;UBERON:0010082,5.14e-12,4;UBERON:0001896,4.94e-10,3;UBERON:0005290,4.94e-10,3;UBERON:0010096,4.94e-10,3;UBERON:0000988,5.57e-10,3;UBERON:0002240,7.73e-10,3;UBERON:0005174,7.73e-10,3;UBERON:0001137,7.73e-10,3;UBERON:0005383,2.96e-09,3;UBERON:0005382,2.96e-09,3;UBERON:0001870,3.83e-09,3;UBERON:0002680,1.87e-08,9;UBERON:0001895,1.87e-08,9;UBERON:0010092,1.87e-08,9;UBERON:0005162,1.00e-07,2;UBERON:0000122,1.00e-07,2;UBERON:0000922,1.32e-07,592;UBERON:0001875,1.41e-07,2;UBERON:0006514,1.41e-07,2;UBERON:0001897,1.76e-07,2;UBERON:0010225,1.76e-07,2;UBERON:0002784,2.04e-07,4;UBERON:0001894,2.94e-07,7;UBERON:0006222,2.94e-07,7;UBERON:0002148,3.66e-07,2;UBERON:0006331,3.66e-07,2;UBERON:0009662,3.66e-07,2;UBERON:0001954,5.56e-07,2;UBERON:0003022,5.56e-07,2;UBERON:0002421,5.56e-07,2;UBERON:0002600,5.56e-07,2;UBERON:0002050,5.64e-07,564;UBERON:0005423,6.71e-07,581;UBERON:0002771,6.84e-07,2;UBERON:0001873,9.17e-07,2;UBERON:0010122,9.17e-07,2 | |||
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| ||
|short_description=p4@RASSF2 | |||
}} | }} |
Latest revision as of 19:04, 16 September 2015
Short description: | p4@RASSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 78bp_to_ENST00000474232, uc002wle.2_5end |
EntrezGene: | RASSF2 |
HGNC: | 9883 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data