FFCP PHASE1:Hg19::chr11:18813315..18813350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84867 | |EntrezGene=84867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9657 | |HGNC=9657 | ||
|TSSclassifier=strong | |||
|UniProt=P54829,B3KXG7,Q86TL3 | |UniProt=P54829,B3KXG7,Q86TL3 | ||
|association_with_transcript=38bp_to_ENST00000358540,ENST00000396167,ENST00000396171,NM_001039970,NM_006906,NM_032781,uc001mpb.2,uc001mpc.2,uc001mpd.2,uc001mpe.2,uc001mpf.2,uc010rdj.1,uc010rdk.1_5end | |association_with_transcript=38bp_to_ENST00000358540,ENST00000396167,ENST00000396171,NM_001039970,NM_006906,NM_032781,uc001mpb.2,uc001mpc.2,uc001mpd.2,uc001mpe.2,uc001mpf.2,uc010rdj.1,uc010rdk.1_5end | ||
|cluster_id=chr11:18813315..18813350,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_PTPN5_5end | |description=CAGE_peak_2_at_PTPN5_5end | ||
|id=chr11:18813315..18813350,- | |id=chr11:18813315..18813350,- | ||
|ontology_enrichment_celltype=CL:0000540!8.37e-07!6;CL:0000031!8.37e-07!6;CL:0000404!8.37e-07!6 | |ontology_enrichment_celltype=CL:0000540!8.37e-07!6;CL:0000031!8.37e-07!6;CL:0000404!8.37e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.39e-08;5!CL:0000540;4.83e-07;6!CL:0000404;4.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.40e-08,5;CL:0000047,2.71e-07,8;CL:0000540,5.77e-07,6;CL:0000031,5.77e-07,6;CL:0000404,5.77e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-17;82!CL:0000031;4.83e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-77!115;UBERON:0001017!7.05e-51!82;UBERON:0000073!4.96e-50!94;UBERON:0001016!4.96e-50!94;UBERON:0001049!1.51e-49!57;UBERON:0005068!1.51e-49!57;UBERON:0006241!1.51e-49!57;UBERON:0007135!1.51e-49!57;UBERON:0005743!4.61e-49!86;UBERON:0002346!5.87e-44!90;UBERON:0003075!2.40e-41!86;UBERON:0007284!2.40e-41!86;UBERON:0003080!6.72e-41!42;UBERON:0002616!8.09e-41!59;UBERON:0002780!3.73e-40!41;UBERON:0001890!3.73e-40!41;UBERON:0006240!3.73e-40!41;UBERON:0000955!5.85e-40!69;UBERON:0006238!5.85e-40!69;UBERON:0002020!2.17e-33!34;UBERON:0003528!2.17e-33!34;UBERON:0001893!4.55e-33!34;UBERON:0002791!6.50e-32!33;UBERON:0001869!1.31e-31!32;UBERON:0000924!3.46e-31!173;UBERON:0006601!3.46e-31!173;UBERON:0003056!3.85e-29!61;UBERON:0004121!5.23e-29!169;UBERON:0002619!4.17e-27!22;UBERON:0000153!7.78e-26!129;UBERON:0007811!7.78e-26!129;UBERON:0001950!1.16e-24!20;UBERON:0000033!2.79e-24!123;UBERON:0000956!5.83e-23!25;UBERON:0000203!5.83e-23!25;UBERON:0000025!1.43e-16!194;UBERON:0004111!8.24e-15!241;UBERON:0000922!1.79e-12!612;UBERON:0000477!2.17e-12!286;UBERON:0002420!3.91e-12!9;UBERON:0007245!3.91e-12!9;UBERON:0010009!3.91e-12!9;UBERON:0010011!3.91e-12!9;UBERON:0000454!3.91e-12!9;UBERON:0002308!5.60e-12!9;UBERON:0000125!5.60e-12!9;UBERON:0000468!4.03e-11!659;UBERON:0003076!6.76e-10!15;UBERON:0003057!6.76e-10!15;UBERON:0000481!7.77e-10!347;UBERON:0009663!1.18e-09!7;UBERON:0000923!1.19e-09!604;UBERON:0005291!1.19e-09!604;UBERON:0006598!1.19e-09!604;UBERON:0002532!1.19e-09!604;UBERON:0002050!1.43e-09!605;UBERON:0005423!1.43e-09!605;UBERON:0002298!2.04e-09!8;UBERON:0000200!6.86e-09!6;UBERON:0001871!9.37e-09!7;UBERON:0000483!1.95e-08!309;UBERON:0001894!2.10e-08!7;UBERON:0006222!2.10e-08!7;UBERON:0000119!3.81e-08!312;UBERON:0002021!4.41e-08!5;UBERON:0000062!5.62e-08!511;UBERON:0000467!6.59e-08!625;UBERON:0004732!7.58e-08!13;UBERON:0000064!7.61e-08!219;UBERON:0000480!7.82e-08!626;UBERON:0000349!9.38e-08!5;UBERON:0001872!9.89e-08!5;UBERON:0004733!4.69e-07!12;UBERON:0002028!4.69e-07!12;UBERON:0007277!4.69e-07!12;UBERON:0000475!6.24e-07!365;UBERON:0000369!7.49e-07!4;UBERON:0002435!7.49e-07!4;UBERON:0000204!7.49e-07!4;UBERON:0010082!7.49e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.82e-77!115;UBERON:0001017!7.05e-51!82;UBERON:0000073!4.96e-50!94;UBERON:0001016!4.96e-50!94;UBERON:0001049!1.51e-49!57;UBERON:0005068!1.51e-49!57;UBERON:0006241!1.51e-49!57;UBERON:0007135!1.51e-49!57;UBERON:0005743!4.61e-49!86;UBERON:0002346!5.87e-44!90;UBERON:0003075!2.40e-41!86;UBERON:0007284!2.40e-41!86;UBERON:0003080!6.72e-41!42;UBERON:0002616!8.09e-41!59;UBERON:0002780!3.73e-40!41;UBERON:0001890!3.73e-40!41;UBERON:0006240!3.73e-40!41;UBERON:0000955!5.85e-40!69;UBERON:0006238!5.85e-40!69;UBERON:0002020!2.17e-33!34;UBERON:0003528!2.17e-33!34;UBERON:0001893!4.55e-33!34;UBERON:0002791!6.50e-32!33;UBERON:0001869!1.31e-31!32;UBERON:0000924!3.46e-31!173;UBERON:0006601!3.46e-31!173;UBERON:0003056!3.85e-29!61;UBERON:0004121!5.23e-29!169;UBERON:0002619!4.17e-27!22;UBERON:0000153!7.78e-26!129;UBERON:0007811!7.78e-26!129;UBERON:0001950!1.16e-24!20;UBERON:0000033!2.79e-24!123;UBERON:0000956!5.83e-23!25;UBERON:0000203!5.83e-23!25;UBERON:0000025!1.43e-16!194;UBERON:0004111!8.24e-15!241;UBERON:0000922!1.79e-12!612;UBERON:0000477!2.17e-12!286;UBERON:0002420!3.91e-12!9;UBERON:0007245!3.91e-12!9;UBERON:0010009!3.91e-12!9;UBERON:0010011!3.91e-12!9;UBERON:0000454!3.91e-12!9;UBERON:0002308!5.60e-12!9;UBERON:0000125!5.60e-12!9;UBERON:0000468!4.03e-11!659;UBERON:0003076!6.76e-10!15;UBERON:0003057!6.76e-10!15;UBERON:0000481!7.77e-10!347;UBERON:0009663!1.18e-09!7;UBERON:0000923!1.19e-09!604;UBERON:0005291!1.19e-09!604;UBERON:0006598!1.19e-09!604;UBERON:0002532!1.19e-09!604;UBERON:0002050!1.43e-09!605;UBERON:0005423!1.43e-09!605;UBERON:0002298!2.04e-09!8;UBERON:0000200!6.86e-09!6;UBERON:0001871!9.37e-09!7;UBERON:0000483!1.95e-08!309;UBERON:0001894!2.10e-08!7;UBERON:0006222!2.10e-08!7;UBERON:0000119!3.81e-08!312;UBERON:0002021!4.41e-08!5;UBERON:0000062!5.62e-08!511;UBERON:0000467!6.59e-08!625;UBERON:0004732!7.58e-08!13;UBERON:0000064!7.61e-08!219;UBERON:0000480!7.82e-08!626;UBERON:0000349!9.38e-08!5;UBERON:0001872!9.89e-08!5;UBERON:0004733!4.69e-07!12;UBERON:0002028!4.69e-07!12;UBERON:0007277!4.69e-07!12;UBERON:0000475!6.24e-07!365;UBERON:0000369!7.49e-07!4;UBERON:0002435!7.49e-07!4;UBERON:0000204!7.49e-07!4;UBERON:0010082!7.49e-07!4 | ||
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| ||
|short_description=p2@PTPN5 | |short_description=p2@PTPN5 | ||
}} | }} |
Latest revision as of 04:02, 17 September 2015
Short description: | p2@PTPN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPN5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 38bp_to_ENST00000358540, ENST00000396167, ENST00000396171, NM_001039970, NM_006906, NM_032781, uc001mpb.2, uc001mpc.2, uc001mpd.2, uc001mpe.2, uc001mpf.2, uc010rdj.1, uc010rdk.1_5end |
EntrezGene: | PTPN5 |
HGNC: | 9657 |
UniProt: | P54829B3KXG7Q86TL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.40e-08 | 5 |
neuronal stem cell | 2.71e-07 | 8 |
neuron | 5.77e-07 | 6 |
neuroblast | 5.77e-07 | 6 |
electrically signaling cell | 5.77e-07 | 6 |