FFCP PHASE1:Hg19::chr3:192127333..192127358,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:192127333..192127358,- to FFCP PHASE1:Hg19::chr3:192127333..192127358,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2257 | |EntrezGene=2257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3668 | |HGNC=3668 | ||
|TSSclassifier=strong | |||
|UniProt=P61328 | |UniProt=P61328 | ||
|association_with_transcript=-495bp_to_ENST00000454309,NM_021032,uc003fsx.2_5end | |||
|cluster_id=chr3:192127333..192127358,- | |||
|description=CAGE_peak_3_at_FGF12_5end | |||
|id=chr3:192127333..192127358,- | |||
|ontology_enrichment_celltype=CL:0002139!5.56e-20!24;CL:0000115!6.34e-20!35;CL:0000071!2.36e-15!18;CL:0002546!2.36e-15!18;CL:0000213!2.89e-14!57;CL:0000215!2.89e-14!57;CL:0002078!1.41e-13!44;CL:1000413!1.17e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.51e-26;36!CL:0002139;1.80e-23;24!CL:0000071;8.29e-21;18!CL:1000413;8.23e-15;9!CL:0002078;2.79e-14;45!CL:0000213;1.06e-11;58!CL:0000215;1.06e-11;58!CL:0002188;1.97e-09;5!CL:0002544;7.37e-08;6!CL:0002545;5.64e-07;2!CL:0002262;7.35e-07;2!CL:1000398;7.35e-07;2!CL:1000746;9.87e-07;7!CL:1000612;9.87e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.06e-30,36;CL:0002139,4.38e-24,24;CL:0002078,4.97e-23,45;CL:0000071,2.53e-21,18;CL:0002546,2.53e-21,18;CL:0000213,2.31e-18,58;CL:0000215,2.31e-18,58;CL:1000413,1.66e-15,9;CL:0002188,4.18e-09,5;CL:0002544,2.70e-08,6;CL:0002545,3.00e-07,2;CL:0002262,6.32e-07,2;CL:1000398,6.32e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;8.29e-21;18!UBERON:0006601;2.05e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;5.64e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-33!115;UBERON:0005743!7.87e-32!86;UBERON:0001017!9.54e-31!82;UBERON:0000073!9.08e-30!94;UBERON:0001016!9.08e-30!94;UBERON:0003075!3.23e-28!86;UBERON:0007284!3.23e-28!86;UBERON:0000477!1.26e-27!286;UBERON:0001049!1.76e-27!57;UBERON:0005068!1.76e-27!57;UBERON:0006241!1.76e-27!57;UBERON:0007135!1.76e-27!57;UBERON:0000955!2.94e-26!69;UBERON:0006238!2.94e-26!69;UBERON:0002346!5.68e-26!90;UBERON:0002616!1.66e-24!59;UBERON:0004111!8.53e-22!241;UBERON:0000025!1.60e-21!194;UBERON:0000153!3.49e-20!129;UBERON:0007811!3.49e-20!129;UBERON:0002780!3.94e-20!41;UBERON:0001890!3.94e-20!41;UBERON:0006240!3.94e-20!41;UBERON:0003056!6.21e-20!61;UBERON:0003080!2.31e-19!42;UBERON:0000033!2.38e-19!123;UBERON:0001893!1.03e-16!34;UBERON:0002020!1.20e-16!34;UBERON:0003528!1.20e-16!34;UBERON:0004121!2.66e-16!169;UBERON:0002791!6.51e-16!33;UBERON:0001869!9.68e-16!32;UBERON:0000924!2.35e-15!173;UBERON:0006601!2.35e-15!173;UBERON:0001986!2.36e-15!18;UBERON:0004638!2.36e-15!18;UBERON:0004852!2.36e-15!18;UBERON:0000483!1.21e-14!309;UBERON:0001950!1.58e-14!20;UBERON:0000119!3.58e-14!312;UBERON:0002619!3.64e-14!22;UBERON:0000064!1.23e-13!219;UBERON:0000956!6.51e-13!25;UBERON:0000203!6.51e-13!25;UBERON:0000468!8.34e-12!659;UBERON:0000487!2.18e-11!22;UBERON:0000922!2.80e-11!612;UBERON:0000467!4.33e-11!625;UBERON:0000480!5.50e-11!626;UBERON:0004732!8.58e-10!13;UBERON:0003915!1.17e-09!9;UBERON:0004700!1.17e-09!9;UBERON:0001917!1.17e-09!9;UBERON:0000923!1.71e-09!604;UBERON:0005291!1.71e-09!604;UBERON:0006598!1.71e-09!604;UBERON:0002532!1.71e-09!604;UBERON:0002050!2.14e-09!605;UBERON:0005423!2.14e-09!605;UBERON:0003076!2.57e-09!15;UBERON:0003057!2.57e-09!15;UBERON:0000481!2.65e-09!347;UBERON:0006914!2.70e-09!25;UBERON:0000063!3.56e-09!97;UBERON:0004733!6.54e-09!12;UBERON:0002028!6.54e-09!12;UBERON:0007277!6.54e-09!12;UBERON:0002049!2.30e-08!79;UBERON:0007798!2.30e-08!79;UBERON:0001737!3.24e-08!9;UBERON:0000055!6.58e-08!69;UBERON:0002680!4.30e-07!9;UBERON:0001895!4.30e-07!9;UBERON:0010092!4.30e-07!9;UBERON:0000200!6.35e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.29e-21;18!UBERON:0001986;8.29e-21;18!UBERON:0004852;8.29e-21;18!UBERON:0000487;1.68e-16;22!UBERON:0003915;8.23e-15;9!UBERON:0004700;8.23e-15;9!UBERON:0001917;8.23e-15;9!UBERON:0001950;2.62e-14;20!UBERON:0006914;3.52e-14;25!UBERON:0002619;7.53e-13;22!UBERON:0000956;4.35e-11;25!UBERON:0000203;4.35e-11;25!UBERON:0000490;5.88e-11;33!UBERON:0002021;1.19e-09;5!UBERON:0001869;5.43e-09;32!UBERON:0001893;1.77e-08;34!UBERON:0000200;4.87e-08;6!UBERON:0002780;1.13e-07;41!UBERON:0001890;1.13e-07;41!UBERON:0001905;1.26e-07;2!UBERON:0002757;1.26e-07;2!UBERON:0010134;1.26e-07;2!UBERON:0005408;1.26e-07;2!UBERON:0001899;1.26e-07;2!UBERON:0003528;1.28e-07;34!UBERON:0002020;1.28e-07;34!UBERON:0002784;1.36e-07;4!UBERON:0000073;2.01e-07;53!UBERON:0002616;2.01e-07;53!UBERON:0002791;2.35e-07;32!UBERON:0005800;5.64e-07;2!UBERON:0001515;5.64e-07;2!UBERON:0001281;7.35e-07;2!UBERON:0003497;7.35e-07;2!UBERON:0003909;7.35e-07;2!UBERON:0003835;7.35e-07;2!UBERON:0000074;9.87e-07;7!UBERON:0001229;9.87e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.53e-21,18;UBERON:0001986,2.53e-21,18;UBERON:0004852,2.53e-21,18;UBERON:0007023,3.41e-17,114;UBERON:0000487,6.50e-17,22;UBERON:0004111,1.34e-15,240;UBERON:0003915,1.66e-15,9;UBERON:0004700,1.66e-15,9;UBERON:0001917,1.66e-15,9;UBERON:0006914,1.55e-14,25;UBERON:0000073,2.54e-14,53;UBERON:0002616,2.54e-14,53;UBERON:0001950,4.04e-14,20;UBERON:0000025,1.49e-13,192;UBERON:0001049,2.59e-13,56;UBERON:0005068,2.59e-13,56;UBERON:0006241,2.59e-13,56;UBERON:0007135,2.59e-13,56;UBERON:0000955,1.08e-12,68;UBERON:0006238,1.08e-12,68;UBERON:0002619,1.11e-12,22;UBERON:0001017,3.53e-12,81;UBERON:0003075,5.01e-12,82;UBERON:0007284,5.01e-12,82;UBERON:0002780,8.20e-12,41;UBERON:0001890,8.20e-12,41;UBERON:0003080,8.20e-12,41;UBERON:0006240,8.20e-12,41;UBERON:0001016,1.48e-11,89;UBERON:0002346,3.27e-11,86;UBERON:0003887,4.37e-11,12;UBERON:0000956,6.10e-11,25;UBERON:0000203,6.10e-11,25;UBERON:0000055,1.60e-10,68;UBERON:0001869,1.07e-09,32;UBERON:0002021,1.32e-09,5;UBERON:0003056,3.91e-09,61;UBERON:0000483,4.85e-09,306;UBERON:0001893,5.40e-09,34;UBERON:0003528,5.58e-09,34;UBERON:0002020,5.58e-09,34;UBERON:0000119,7.56e-09,309;UBERON:0007500,1.00e-08,59;UBERON:0001981,1.00e-08,59;UBERON:0004537,1.00e-08,59;UBERON:0006965,1.00e-08,59;UBERON:0002049,1.37e-08,78;UBERON:0007798,1.37e-08,78;UBERON:0000058,1.66e-08,19;UBERON:0010371,2.41e-08,104;UBERON:0002791,3.96e-08,32;UBERON:0000200,4.93e-08,6;UBERON:0004872,5.93e-08,83;UBERON:0000080,8.98e-08,9;UBERON:0002120,8.98e-08,9;UBERON:0004875,8.98e-08,9;UBERON:0005721,8.98e-08,9;UBERON:0005754,8.98e-08,9;UBERON:0007297,8.98e-08,9;UBERON:0010314,1.08e-07,132;UBERON:0002784,1.11e-07,4;UBERON:0011216,1.20e-07,223;UBERON:0001905,1.35e-07,2;UBERON:0002757,1.35e-07,2;UBERON:0010134,1.35e-07,2;UBERON:0005408,1.35e-07,2;UBERON:0001899,1.35e-07,2;UBERON:0005800,3.00e-07,2;UBERON:0001515,3.00e-07,2;UBERON:0000923,4.43e-07,560;UBERON:0010316,4.43e-07,560;UBERON:0005291,4.43e-07,560;UBERON:0006598,4.43e-07,560;UBERON:0010317,4.43e-07,560;UBERON:0002532,4.43e-07,560;UBERON:0002050,6.31e-07,564;UBERON:0001281,6.32e-07,2;UBERON:0003497,6.32e-07,2;UBERON:0003909,6.32e-07,2;UBERON:0003835,6.32e-07,2;UBERON:0004121,6.34e-07,171;UBERON:0000924,6.34e-07,171;UBERON:0006601,6.34e-07,171 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.347140501607594,1.69592382577203,2.93649605346934,1.6507082516404,1.46296476575767,1.55050055501597,0.35576626268671,1.67360306382335,1.20848795132744,0.760272105718513,1.46437234528902,1.83831540172934,3.24056779152704,0.892997282840798,2.2452937262617,2.25222960966644,4.5994991239765,0,0.549605231791222,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0,0.414644220061482,0.504641701751257,0,0,0,0,0,0,1.18306800039844,0.337169380156203,0.964044119533928,0.661763836394364,1.30727666455444,0.71181185733329,1.21348177344148,0.784885860501384,0.769494313892781,2.95262181849859,1.40241773803446,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.469634776943287,0.577465791044295,1.38895653772983,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.462092022626489,0,0,0.422206515571503,1.13733384070897,1.53084334748864,1.0795795805107,3.08454505380579,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.445234820091624,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0.969332746095218,2.22643435588443,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,3.05163472634166,0.774054819518572,0.295547618953547,1.09692698576986,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,3.10142335502381,0,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.988511511572023,2.71497068714184,0.337005664903385,0,0.702793337176017,0,0,0,1.97292201424695,0,0.30607276163049,0.252746318513952,0,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.90392296312213,2.32971271899477,0,1.45614830698521,0.391102765469606,0.240476460754601,0,0,0,0,0,0,0,0,0.951329442515298,1.77824838730966,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,1.14580212005842,0,0.199679000498991,0.858452096273142,0,0.201550417460179,0,0,0,0,0,0,0,0,0.544813624446302,0.643012593860077,0.412618309791701,0.415440338029185,0,0,1.03274246318642,0,0.236417121897595,0.262272940674991,0,0.717149357331379,0,0,1.98627591109629,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,1.16354660725395,0.26446520348538,0.171086837884329,0,0,0,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,2.07444650333337,0.751145584238999,1.72022758707021,0.443716206147409,0.18628920882415,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0.537266523244462,0,0,0.176689145945881,0.771656153083659,0.168942440653073,1.28120759293973,0,0.607719912354764,0.829550616910385,0,0,0,0,0,0,0.19998739585493,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,2.8339315265117,1.43670473151436,2.2562800066483,0.504143392443436,1.24483054435592,1.29180516505481,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,1.2156765231311,1.56215619722769,0.413373593002368,1.01465296310251,0,1.09651553371436,0,0,0.255524855279191,4.28561468702629,4.37168838884471,0,0.227662191351298,0.177404740325278,0,0,1.35939465953663,2.23627430113687,0.236387681767936,0,0.627944742804112,0.314231179832004,0,0.913158720509496,0,0,0.428859265059938,0.316027223465453,0,0,0,0,0,0,2.58136415292167,0.118332000730565,0.170426809518315,3.81048345171836,2.06196181689645,0,0,1.67783147696688,0,0,1.94228651156368,0.513314034281235,1.1598144313382,0,0,0,0,0.11294608203896,0.989464650708862,0.150962843566674,0,0,0,0.245148321753905,0.471353094203252,0.588925401344836,0,0.8453114551668,0,1.691710523637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| ||
|short_description=p3@FGF12 | |||
}} | }} |
Latest revision as of 10:57, 17 September 2015
Short description: | p3@FGF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGF12_5end |
Coexpression cluster: | NA |
Association with transcript: | -495bp_to_ENST00000454309, NM_021032, uc003fsx.2_5end |
EntrezGene: | FGF12 |
HGNC: | 3668 |
UniProt: | P61328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.06e-30 | 36 |
endothelial cell of vascular tree | 4.38e-24 | 24 |
meso-epithelial cell | 4.97e-23 | 45 |
blood vessel endothelial cell | 2.53e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.53e-21 | 18 |
lining cell | 2.31e-18 | 58 |
barrier cell | 2.31e-18 | 58 |
endothelial cell of artery | 1.66e-15 | 9 |
glomerular endothelial cell | 4.18e-09 | 5 |
aortic endothelial cell | 2.70e-08 | 6 |
thoracic aorta endothelial cell | 3.00e-07 | 2 |
endothelial cell of sinusoid | 6.32e-07 | 2 |
endothelial cell of hepatic sinusoid | 6.32e-07 | 2 |