FFCP PHASE1:Hg19::chr6:31021973..31021990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285834 | |EntrezGene=285834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27780 | |HGNC=27780 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | |association_with_transcript=0bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | ||
|cluster_id=chr6:31021973..31021990,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_HCG22_5end | |description=CAGE_peak_1_at_HCG22_5end | ||
|id=chr6:31021973..31021990,+ | |id=chr6:31021973..31021990,+ | ||
|ontology_enrichment_celltype=CL:0002605!5.69e-08!3;CL:0000064!2.54e-07!3;CL:0005012!2.54e-07!3;CL:0000067!2.54e-07!3;CL:0002304!2.54e-07!3;CL:0000047!4.80e-07!8 | |ontology_enrichment_celltype=CL:0002605!5.69e-08!3;CL:0000064!2.54e-07!3;CL:0005012!2.54e-07!3;CL:0000067!2.54e-07!3;CL:0002304!2.54e-07!3;CL:0000047!4.80e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.54e-15;2!CL:0002605;6.44e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.69e-11,3;CL:0000047,1.03e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.13e-24;3!UBERON:0003057;9.13e-24;3!UBERON:0006601;1.47e-09;82!UBERON:0006222;1.27e-08;1!UBERON:0005425;1.27e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.31e-59!82;UBERON:0001049!1.80e-58!57;UBERON:0005068!1.80e-58!57;UBERON:0006241!1.80e-58!57;UBERON:0007135!1.80e-58!57;UBERON:0005743!5.83e-56!86;UBERON:0000073!9.72e-52!94;UBERON:0001016!9.72e-52!94;UBERON:0003075!2.85e-49!86;UBERON:0007284!2.85e-49!86;UBERON:0002346!1.05e-48!90;UBERON:0002616!7.98e-47!59;UBERON:0001893!8.79e-46!34;UBERON:0002020!9.95e-46!34;UBERON:0003528!9.95e-46!34;UBERON:0000955!1.88e-44!69;UBERON:0006238!1.88e-44!69;UBERON:0002791!6.65e-44!33;UBERON:0002780!6.96e-43!41;UBERON:0001890!6.96e-43!41;UBERON:0006240!6.96e-43!41;UBERON:0003080!1.16e-41!42;UBERON:0001869!1.67e-41!32;UBERON:0000153!2.06e-40!129;UBERON:0007811!2.06e-40!129;UBERON:0003056!1.44e-36!61;UBERON:0000033!3.41e-36!123;UBERON:0000924!1.12e-34!173;UBERON:0006601!1.12e-34!173;UBERON:0004121!2.02e-34!169;UBERON:0007023!1.81e-33!115;UBERON:0000956!4.22e-32!25;UBERON:0000203!4.22e-32!25;UBERON:0002619!3.60e-26!22;UBERON:0001950!4.73e-22!20;UBERON:0003076!2.45e-17!15;UBERON:0003057!2.45e-17!15;UBERON:0002308!5.50e-15!9;UBERON:0000125!5.50e-15!9;UBERON:0002298!1.47e-14!8;UBERON:0004732!2.98e-13!13;UBERON:0000064!2.14e-12!219;UBERON:0000025!7.49e-12!194;UBERON:0002420!1.79e-11!9;UBERON:0007245!1.79e-11!9;UBERON:0010009!1.79e-11!9;UBERON:0010011!1.79e-11!9;UBERON:0000454!1.79e-11!9;UBERON:0004733!2.14e-11!12;UBERON:0002028!2.14e-11!12;UBERON:0007277!2.14e-11!12;UBERON:0009663!5.01e-11!7;UBERON:0000477!5.97e-11!286;UBERON:0004111!7.45e-10!241;UBERON:0000475!1.14e-09!365;UBERON:0000488!4.54e-09!4;UBERON:0001871!6.62e-09!7;UBERON:0000369!7.09e-09!4;UBERON:0002435!7.09e-09!4;UBERON:0000204!7.09e-09!4;UBERON:0010082!7.09e-09!4;UBERON:0000483!7.22e-09!309;UBERON:0000119!1.19e-08!312;UBERON:0000200!1.80e-08!6;UBERON:0002240!1.81e-08!3;UBERON:0001896!2.04e-08!3;UBERON:0005290!2.04e-08!3;UBERON:0010096!2.04e-08!3;UBERON:0000349!2.94e-08!5;UBERON:0000988!6.10e-08!3;UBERON:0006331!6.53e-08!3;UBERON:0000922!2.01e-07!612;UBERON:0001778!2.54e-07!3;UBERON:0001775!2.54e-07!3;UBERON:0002021!4.48e-07!5;UBERON:0001872!5.20e-07!5;UBERON:0005383!7.24e-07!3;UBERON:0005382!7.24e-07!3;UBERON:0000481!9.89e-07!347 | |ontology_enrichment_uberon=UBERON:0001017!2.31e-59!82;UBERON:0001049!1.80e-58!57;UBERON:0005068!1.80e-58!57;UBERON:0006241!1.80e-58!57;UBERON:0007135!1.80e-58!57;UBERON:0005743!5.83e-56!86;UBERON:0000073!9.72e-52!94;UBERON:0001016!9.72e-52!94;UBERON:0003075!2.85e-49!86;UBERON:0007284!2.85e-49!86;UBERON:0002346!1.05e-48!90;UBERON:0002616!7.98e-47!59;UBERON:0001893!8.79e-46!34;UBERON:0002020!9.95e-46!34;UBERON:0003528!9.95e-46!34;UBERON:0000955!1.88e-44!69;UBERON:0006238!1.88e-44!69;UBERON:0002791!6.65e-44!33;UBERON:0002780!6.96e-43!41;UBERON:0001890!6.96e-43!41;UBERON:0006240!6.96e-43!41;UBERON:0003080!1.16e-41!42;UBERON:0001869!1.67e-41!32;UBERON:0000153!2.06e-40!129;UBERON:0007811!2.06e-40!129;UBERON:0003056!1.44e-36!61;UBERON:0000033!3.41e-36!123;UBERON:0000924!1.12e-34!173;UBERON:0006601!1.12e-34!173;UBERON:0004121!2.02e-34!169;UBERON:0007023!1.81e-33!115;UBERON:0000956!4.22e-32!25;UBERON:0000203!4.22e-32!25;UBERON:0002619!3.60e-26!22;UBERON:0001950!4.73e-22!20;UBERON:0003076!2.45e-17!15;UBERON:0003057!2.45e-17!15;UBERON:0002308!5.50e-15!9;UBERON:0000125!5.50e-15!9;UBERON:0002298!1.47e-14!8;UBERON:0004732!2.98e-13!13;UBERON:0000064!2.14e-12!219;UBERON:0000025!7.49e-12!194;UBERON:0002420!1.79e-11!9;UBERON:0007245!1.79e-11!9;UBERON:0010009!1.79e-11!9;UBERON:0010011!1.79e-11!9;UBERON:0000454!1.79e-11!9;UBERON:0004733!2.14e-11!12;UBERON:0002028!2.14e-11!12;UBERON:0007277!2.14e-11!12;UBERON:0009663!5.01e-11!7;UBERON:0000477!5.97e-11!286;UBERON:0004111!7.45e-10!241;UBERON:0000475!1.14e-09!365;UBERON:0000488!4.54e-09!4;UBERON:0001871!6.62e-09!7;UBERON:0000369!7.09e-09!4;UBERON:0002435!7.09e-09!4;UBERON:0000204!7.09e-09!4;UBERON:0010082!7.09e-09!4;UBERON:0000483!7.22e-09!309;UBERON:0000119!1.19e-08!312;UBERON:0000200!1.80e-08!6;UBERON:0002240!1.81e-08!3;UBERON:0001896!2.04e-08!3;UBERON:0005290!2.04e-08!3;UBERON:0010096!2.04e-08!3;UBERON:0000349!2.94e-08!5;UBERON:0000988!6.10e-08!3;UBERON:0006331!6.53e-08!3;UBERON:0000922!2.01e-07!612;UBERON:0001778!2.54e-07!3;UBERON:0001775!2.54e-07!3;UBERON:0002021!4.48e-07!5;UBERON:0001872!5.20e-07!5;UBERON:0005383!7.24e-07!3;UBERON:0005382!7.24e-07!3;UBERON:0000481!9.89e-07!347 | ||
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| ||
|short_description=p1@HCG22 | |short_description=p1@HCG22 | ||
}} | }} |
Latest revision as of 19:41, 17 September 2015
Short description: | p1@HCG22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCG22_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000426185, NR_003948, uc003nsj.1, uc010jsi.1_5end |
EntrezGene: | HCG22 |
HGNC: | 27780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.69e-11 | 3 |
neuronal stem cell | 1.03e-08 | 8 |