FFCP PHASE1:Hg19::chr3:6902794..6902808,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:6902794..6902808,+ to FFCP PHASE1:Hg19::chr3:6902794..6902808,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2917 | |EntrezGene=2917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4599 | |HGNC=4599 | ||
|TSSclassifier=strong | |||
|UniProt=Q14831,B2R693,Q59G95,B9EGG9 | |UniProt=Q14831,B2R693,Q59G95,B9EGG9 | ||
|association_with_transcript=0bp_to_ENST00000357716,ENST00000467425,ENST00000486284,NM_000844,NM_181874,uc003bql.2,uc003bqm.2,uc010hcf.2,uc010hcg.2,uc011ata.1,uc011atb.1,uc011atc.1_5end | |||
|cluster_id=chr3:6902794..6902808,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_GRM7_5end | |||
|id=chr3:6902794..6902808,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.27e-09!25;CL:0000047!3.62e-07!8;CL:0000133!7.21e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.31e-09;7!CL:0000126;5.31e-09;7!CL:0000127;5.31e-09;7!CL:0002319;3.21e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.65e-09,7;CL:0000126,5.65e-09,7;CL:0000127,5.65e-09,7;CL:0002453,5.65e-09,7;CL:0002319,3.02e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.68e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.64e-72!82;UBERON:0001049!5.78e-71!57;UBERON:0005068!5.78e-71!57;UBERON:0006241!5.78e-71!57;UBERON:0007135!5.78e-71!57;UBERON:0000073!6.66e-71!94;UBERON:0001016!6.66e-71!94;UBERON:0007023!4.90e-70!115;UBERON:0005743!5.21e-70!86;UBERON:0002616!4.95e-62!59;UBERON:0000955!9.02e-60!69;UBERON:0006238!9.02e-60!69;UBERON:0003075!1.53e-55!86;UBERON:0007284!1.53e-55!86;UBERON:0002346!1.65e-53!90;UBERON:0003080!4.69e-53!42;UBERON:0002780!5.55e-52!41;UBERON:0001890!5.55e-52!41;UBERON:0006240!5.55e-52!41;UBERON:0001893!1.41e-44!34;UBERON:0002020!1.55e-44!34;UBERON:0003528!1.55e-44!34;UBERON:0002791!2.91e-43!33;UBERON:0004121!9.67e-43!169;UBERON:0001869!1.77e-42!32;UBERON:0003056!3.06e-42!61;UBERON:0000924!4.42e-42!173;UBERON:0006601!4.42e-42!173;UBERON:0000153!1.27e-40!129;UBERON:0007811!1.27e-40!129;UBERON:0000033!1.53e-38!123;UBERON:0000956!7.72e-34!25;UBERON:0000203!7.72e-34!25;UBERON:0002619!7.12e-31!22;UBERON:0001950!3.51e-28!20;UBERON:0003076!3.59e-18!15;UBERON:0003057!3.59e-18!15;UBERON:0000025!3.01e-17!194;UBERON:0004732!8.32e-16!13;UBERON:0004111!2.83e-15!241;UBERON:0000922!5.15e-15!612;UBERON:0004733!1.02e-14!12;UBERON:0002028!1.02e-14!12;UBERON:0007277!1.02e-14!12;UBERON:0000064!1.10e-14!219;UBERON:0000477!1.67e-14!286;UBERON:0000475!3.41e-13!365;UBERON:0000062!8.90e-13!511;UBERON:0002050!2.10e-12!605;UBERON:0005423!2.10e-12!605;UBERON:0000481!2.28e-12!347;UBERON:0002420!3.66e-12!9;UBERON:0007245!3.66e-12!9;UBERON:0010009!3.66e-12!9;UBERON:0010011!3.66e-12!9;UBERON:0000454!3.66e-12!9;UBERON:0002308!5.70e-12!9;UBERON:0000125!5.70e-12!9;UBERON:0000923!6.79e-12!604;UBERON:0005291!6.79e-12!604;UBERON:0006598!6.79e-12!604;UBERON:0002532!6.79e-12!604;UBERON:0000468!6.86e-12!659;UBERON:0002680!1.83e-11!9;UBERON:0001895!1.83e-11!9;UBERON:0010092!1.83e-11!9;UBERON:0001871!1.99e-11!7;UBERON:0000483!4.98e-11!309;UBERON:0000119!1.08e-10!312;UBERON:0000467!2.94e-10!625;UBERON:0002298!2.98e-10!8;UBERON:0000480!3.54e-10!626;UBERON:0009663!1.19e-09!7;UBERON:0000200!2.90e-09!6;UBERON:0001894!1.11e-08!7;UBERON:0006222!1.11e-08!7;UBERON:0000349!4.32e-08!5;UBERON:0002021!4.57e-08!5;UBERON:0001872!4.97e-08!5;UBERON:0002037!4.98e-08!6;UBERON:0006215!4.98e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.92e-55;32!UBERON:0003528;5.82e-55;34!UBERON:0002020;5.82e-55;34!UBERON:0001893;6.58e-55;34!UBERON:0002791;7.35e-55;32!UBERON:0002780;2.74e-53;41!UBERON:0001890;2.74e-53;41!UBERON:0000073;1.69e-52;53!UBERON:0002616;1.69e-52;53!UBERON:0000956;1.86e-48;25!UBERON:0000203;1.86e-48;25!UBERON:0002619;3.94e-44;22!UBERON:0001950;3.16e-40;20!UBERON:0001017;8.31e-36;75!UBERON:0000955;8.68e-36;68!UBERON:0001016;2.75e-31;83!UBERON:0004732;3.74e-22;13!UBERON:0004733;1.37e-20;12!UBERON:0002028;1.37e-20;12!UBERON:0002420;6.12e-17;9!UBERON:0007245;6.12e-17;9!UBERON:0010009;6.12e-17;9!UBERON:0010011;6.12e-17;9!UBERON:0000454;6.12e-17;9!UBERON:0000125;1.14e-16;9!UBERON:0002308;1.14e-16;9!UBERON:0002680;6.69e-16;9!UBERON:0001895;6.69e-16;9!UBERON:0007023;3.03e-15;114!UBERON:0001871;5.52e-14;6!UBERON:0009663;2.62e-13;7!UBERON:0000200;1.05e-12;6!UBERON:0011216;5.76e-12;132!UBERON:0001894;8.23e-12;7!UBERON:0002298;2.41e-11;6!UBERON:0000349;5.30e-11;5!UBERON:0002021;5.52e-11;5!UBERON:0001872;6.41e-11;5!UBERON:0002037;6.44e-11;6!UBERON:0010314;7.17e-09;132!UBERON:0000369;7.92e-09;4!UBERON:0002435;7.92e-09;4!UBERON:0000204;7.92e-09;4!UBERON:0002784;9.43e-08;4!UBERON:0001870;2.74e-07;3!UBERON:0005383;5.86e-07;3!UBERON:0005382;5.86e-07;3!UBERON:0000922;7.64e-07;49!UBERON:0003296;7.71e-07;4!UBERON:0010133;7.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.55e-101,56;UBERON:0005068,9.55e-101,56;UBERON:0006241,9.55e-101,56;UBERON:0007135,9.55e-101,56;UBERON:0000073,2.94e-95,53;UBERON:0002616,2.94e-95,53;UBERON:0001017,4.52e-95,81;UBERON:0001016,9.79e-90,89;UBERON:0000955,1.01e-81,68;UBERON:0006238,1.01e-81,68;UBERON:0003075,1.18e-78,82;UBERON:0007284,1.18e-78,82;UBERON:0002780,9.52e-75,41;UBERON:0001890,9.52e-75,41;UBERON:0003080,9.52e-75,41;UBERON:0006240,9.52e-75,41;UBERON:0002346,3.82e-74,86;UBERON:0001893,5.61e-64,34;UBERON:0003528,6.44e-64,34;UBERON:0002020,6.44e-64,34;UBERON:0003056,4.35e-61,61;UBERON:0001869,6.33e-61,32;UBERON:0002791,2.15e-60,32;UBERON:0010371,4.06e-60,104;UBERON:0007023,5.42e-53,114;UBERON:0004121,5.35e-49,171;UBERON:0000924,5.35e-49,171;UBERON:0006601,5.35e-49,171;UBERON:0000956,2.31e-48,25;UBERON:0000203,2.31e-48,25;UBERON:0010314,6.42e-47,132;UBERON:0002619,4.71e-44,22;UBERON:0011216,2.09e-42,223;UBERON:0001950,3.84e-40,20;UBERON:0003076,1.32e-25,15;UBERON:0003057,1.32e-25,15;UBERON:0004732,3.56e-22,13;UBERON:0004733,1.34e-20,12;UBERON:0002028,1.34e-20,12;UBERON:0007277,1.34e-20,12;UBERON:0000025,3.45e-20,192;UBERON:0002420,6.75e-17,9;UBERON:0007245,6.75e-17,9;UBERON:0010009,6.75e-17,9;UBERON:0010011,6.75e-17,9;UBERON:0000454,6.75e-17,9;UBERON:0000125,1.28e-16,9;UBERON:0002308,1.28e-16,9;UBERON:0004111,1.81e-16,240;UBERON:0002680,6.96e-16,9;UBERON:0001895,6.96e-16,9;UBERON:0010092,6.96e-16,9;UBERON:0001871,6.33e-14,6;UBERON:0009663,2.91e-13,7;UBERON:0000483,8.90e-13,306;UBERON:0000200,1.05e-12,6;UBERON:0000119,1.76e-12,309;UBERON:0001894,7.35e-12,7;UBERON:0006222,7.35e-12,7;UBERON:0002298,2.37e-11,6;UBERON:0000922,3.95e-11,592;UBERON:0002050,4.34e-11,564;UBERON:0000349,5.21e-11,5;UBERON:0002021,5.64e-11,5;UBERON:0001872,6.36e-11,5;UBERON:0002037,6.39e-11,6;UBERON:0006215,6.39e-11,6;UBERON:0000923,9.94e-11,560;UBERON:0010316,9.94e-11,560;UBERON:0005291,9.94e-11,560;UBERON:0006598,9.94e-11,560;UBERON:0010317,9.94e-11,560;UBERON:0002532,9.94e-11,560;UBERON:0005423,1.31e-10,581;UBERON:0000369,8.09e-09,4;UBERON:0002435,8.09e-09,4;UBERON:0000204,8.09e-09,4;UBERON:0010082,8.09e-09,4;UBERON:0002784,8.38e-08,4;UBERON:0001870,2.83e-07,3;UBERON:0005383,5.92e-07,3;UBERON:0005382,5.92e-07,3;UBERON:0003296,7.09e-07,4;UBERON:0010133,7.09e-07,4 | |||
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| ||
|short_description=p1@GRM7 | |||
}} | }} |
Latest revision as of 11:09, 19 September 2015
Short description: | p1@GRM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRM7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000357716, ENST00000467425, ENST00000486284, NM_000844, NM_181874, uc003bql.2, uc003bqm.2, uc010hcf.2, uc010hcg.2, uc011ata.1, uc011atb.1, uc011atc.1_5end |
EntrezGene: | GRM7 |
HGNC: | 4599 |
UniProt: | Q14831B2R693Q59G95B9EGG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.65e-09 | 7 |
macroglial cell | 5.65e-09 | 7 |
astrocyte | 5.65e-09 | 7 |
oligodendrocyte precursor cell | 5.65e-09 | 7 |
neural cell | 3.02e-07 | 25 |