FFCP PHASE1:Hg19::chr14:33403881..33403924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64067 | |EntrezGene=64067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |HGNC=19311 | ||
|TSSclassifier=strong | |||
|UniProt=F8VR32,F8VS42 | |UniProt=F8VR32,F8VS42 | ||
|association_with_transcript=-214bp_to_ENST00000551492,ENST00000551634_5end | |association_with_transcript=-214bp_to_ENST00000551492,ENST00000551634_5end | ||
|cluster_id=chr14:33403881..33403924,+ | |||
|coexpression_cluster_id=C1030 | |coexpression_cluster_id=C1030 | ||
|description=CAGE_peak_1_at_NPAS3_5end | |description=CAGE_peak_1_at_NPAS3_5end | ||
|id=chr14:33403881..33403924,+ | |id=chr14:33403881..33403924,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.99e-10!25;CL:0000128!4.32e-07!7;CL:0000126!4.32e-07!7;CL:0000127!4.32e-07!7;CL:0002453!4.32e-07!7;CL:0000133!6.20e-07!59 | |ontology_enrichment_celltype=CL:0002319!5.99e-10!25;CL:0000128!4.32e-07!7;CL:0000126!4.32e-07!7;CL:0000127!4.32e-07!7;CL:0002453!4.32e-07!7;CL:0000133!6.20e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.39e-10;25!CL:0000128;4.29e-09;7!CL:0000126;4.29e-09;7!CL:0000127;4.29e-09;7!CL:0002605;2.35e-07;3!CL:0000243;7.98e-07;15!CL:0000125;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.67e-10,25;CL:0000128,3.65e-09,7;CL:0000126,3.65e-09,7;CL:0000127,3.65e-09,7;CL:0002453,3.65e-09,7;CL:0002605,2.35e-07,3;CL:0000243,7.13e-07,15;CL:0000125,7.13e-07,15;CL:0000030,7.13e-07,15;CL:0000339,7.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.11e-15;82!UBERON:0006238;5.83e-07;10!CL:0000339;7.98e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.50e-56!82;UBERON:0005743!6.90e-55!86;UBERON:0000073!9.13e-54!94;UBERON:0001016!9.13e-54!94;UBERON:0001049!4.96e-51!57;UBERON:0005068!4.96e-51!57;UBERON:0006241!4.96e-51!57;UBERON:0007135!4.96e-51!57;UBERON:0000955!1.33e-46!69;UBERON:0006238!1.33e-46!69;UBERON:0002346!1.37e-43!90;UBERON:0002616!2.30e-43!59;UBERON:0003075!1.90e-42!86;UBERON:0007284!1.90e-42!86;UBERON:0002780!4.86e-39!41;UBERON:0001890!4.86e-39!41;UBERON:0006240!4.86e-39!41;UBERON:0003080!1.08e-37!42;UBERON:0001893!1.88e-35!34;UBERON:0002020!1.96e-35!34;UBERON:0003528!1.96e-35!34;UBERON:0002791!1.78e-34!33;UBERON:0000924!7.51e-34!173;UBERON:0006601!7.51e-34!173;UBERON:0000153!8.15e-34!129;UBERON:0007811!8.15e-34!129;UBERON:0001869!1.12e-33!32;UBERON:0003056!1.91e-33!61;UBERON:0000033!6.64e-33!123;UBERON:0004121!1.47e-32!169;UBERON:0007023!7.47e-32!115;UBERON:0000956!8.87e-27!25;UBERON:0000203!8.87e-27!25;UBERON:0002619!1.86e-23!22;UBERON:0001950!2.34e-21!20;UBERON:0003076!5.19e-14!15;UBERON:0003057!5.19e-14!15;UBERON:0000475!4.69e-13!365;UBERON:0004732!5.52e-12!13;UBERON:0004733!3.11e-11!12;UBERON:0002028!3.11e-11!12;UBERON:0007277!3.11e-11!12;UBERON:0000064!1.17e-10!219;UBERON:0002420!3.53e-10!9;UBERON:0007245!3.53e-10!9;UBERON:0010009!3.53e-10!9;UBERON:0010011!3.53e-10!9;UBERON:0000454!3.53e-10!9;UBERON:0002308!5.25e-10!9;UBERON:0000125!5.25e-10!9;UBERON:0001871!5.48e-09!7;UBERON:0002680!1.94e-08!9;UBERON:0001895!1.94e-08!9;UBERON:0010092!1.94e-08!9;UBERON:0000468!3.38e-08!659;UBERON:0009663!3.45e-08!7;UBERON:0000119!6.27e-08!312;UBERON:0000483!6.41e-08!309;UBERON:0000922!8.55e-08!612;UBERON:0000062!2.84e-07!511;UBERON:0000200!3.79e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!3.50e-56!82;UBERON:0005743!6.90e-55!86;UBERON:0000073!9.13e-54!94;UBERON:0001016!9.13e-54!94;UBERON:0001049!4.96e-51!57;UBERON:0005068!4.96e-51!57;UBERON:0006241!4.96e-51!57;UBERON:0007135!4.96e-51!57;UBERON:0000955!1.33e-46!69;UBERON:0006238!1.33e-46!69;UBERON:0002346!1.37e-43!90;UBERON:0002616!2.30e-43!59;UBERON:0003075!1.90e-42!86;UBERON:0007284!1.90e-42!86;UBERON:0002780!4.86e-39!41;UBERON:0001890!4.86e-39!41;UBERON:0006240!4.86e-39!41;UBERON:0003080!1.08e-37!42;UBERON:0001893!1.88e-35!34;UBERON:0002020!1.96e-35!34;UBERON:0003528!1.96e-35!34;UBERON:0002791!1.78e-34!33;UBERON:0000924!7.51e-34!173;UBERON:0006601!7.51e-34!173;UBERON:0000153!8.15e-34!129;UBERON:0007811!8.15e-34!129;UBERON:0001869!1.12e-33!32;UBERON:0003056!1.91e-33!61;UBERON:0000033!6.64e-33!123;UBERON:0004121!1.47e-32!169;UBERON:0007023!7.47e-32!115;UBERON:0000956!8.87e-27!25;UBERON:0000203!8.87e-27!25;UBERON:0002619!1.86e-23!22;UBERON:0001950!2.34e-21!20;UBERON:0003076!5.19e-14!15;UBERON:0003057!5.19e-14!15;UBERON:0000475!4.69e-13!365;UBERON:0004732!5.52e-12!13;UBERON:0004733!3.11e-11!12;UBERON:0002028!3.11e-11!12;UBERON:0007277!3.11e-11!12;UBERON:0000064!1.17e-10!219;UBERON:0002420!3.53e-10!9;UBERON:0007245!3.53e-10!9;UBERON:0010009!3.53e-10!9;UBERON:0010011!3.53e-10!9;UBERON:0000454!3.53e-10!9;UBERON:0002308!5.25e-10!9;UBERON:0000125!5.25e-10!9;UBERON:0001871!5.48e-09!7;UBERON:0002680!1.94e-08!9;UBERON:0001895!1.94e-08!9;UBERON:0010092!1.94e-08!9;UBERON:0000468!3.38e-08!659;UBERON:0009663!3.45e-08!7;UBERON:0000119!6.27e-08!312;UBERON:0000483!6.41e-08!309;UBERON:0000922!8.55e-08!612;UBERON:0000062!2.84e-07!511;UBERON:0000200!3.79e-07!6 | ||
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| ||
|short_description=p1@NPAS3 | |short_description=p1@NPAS3 | ||
}} | }} |
Latest revision as of 18:09, 19 September 2015
Short description: | p1@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPAS3_5end |
Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
Association with transcript: | -214bp_to_ENST00000551492, ENST00000551634_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | F8VR32F8VS42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.67e-10 | 25 |
oligodendrocyte | 3.65e-09 | 7 |
macroglial cell | 3.65e-09 | 7 |
astrocyte | 3.65e-09 | 7 |
oligodendrocyte precursor cell | 3.65e-09 | 7 |
astrocyte of the cerebral cortex | 2.35e-07 | 3 |
glial cell (sensu Vertebrata) | 7.13e-07 | 15 |
glial cell | 7.13e-07 | 15 |
glioblast | 7.13e-07 | 15 |
glioblast (sensu Vertebrata) | 7.13e-07 | 15 |