FFCP PHASE1:Hg19::chr19:6502590..6502613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10382 | |EntrezGene=10382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20774 | |HGNC=20774 | ||
|TSSclassifier=strong | |||
|UniProt=P04350 | |UniProt=P04350 | ||
|association_with_transcript=-260bp_to_ENST00000264071,NM_006087,uc002mfg.1_5end | |association_with_transcript=-260bp_to_ENST00000264071,NM_006087,uc002mfg.1_5end | ||
|cluster_id=chr19:6502590..6502613,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_4_at_TUBB4A_5end | |description=CAGE_peak_4_at_TUBB4A_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.01e-22;3!UBERON:0006601;4.72e-11;82!UBERON:0005425;4.56e-08;1 | |ontology_enrichment_development_v019=UBERON:0006215;5.01e-22;3!UBERON:0006601;4.72e-11;82!UBERON:0005425;4.56e-08;1 | ||
|ontology_enrichment_disease=DOID:3095!9.80e-07!22;DOID:2994!9.80e-07!22 | |ontology_enrichment_disease=DOID:3095!9.80e-07!22;DOID:2994!9.80e-07!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.50e-64!94;UBERON:0001016!5.50e-64!94;UBERON:0005743!4.78e-62!86;UBERON:0001017!8.27e-61!82;UBERON:0001049!1.39e-58!57;UBERON:0005068!1.39e-58!57;UBERON:0006241!1.39e-58!57;UBERON:0007135!1.39e-58!57;UBERON:0000955!3.50e-50!69;UBERON:0006238!3.50e-50!69;UBERON:0002346!3.39e-49!90;UBERON:0002616!7.28e-48!59;UBERON:0003075!5.50e-46!86;UBERON:0007284!5.50e-46!86;UBERON:0001893!1.37e-45!34;UBERON:0002020!1.71e-45!34;UBERON:0003528!1.71e-45!34;UBERON:0002791!1.35e-43!33;UBERON:0001869!3.89e-42!32;UBERON:0002780!4.25e-42!41;UBERON:0001890!4.25e-42!41;UBERON:0006240!4.25e-42!41;UBERON:0003080!7.02e-41!42;UBERON:0002619!3.67e-34!22;UBERON:0001950!4.69e-34!20;UBERON:0000924!5.25e-32!173;UBERON:0006601!5.25e-32!173;UBERON:0003056!7.78e-31!61;UBERON:0004121!1.77e-29!169;UBERON:0000956!1.81e-29!25;UBERON:0000203!1.81e-29!25;UBERON:0007023!3.73e-28!115;UBERON:0000033!1.90e-26!123;UBERON:0000153!1.41e-24!129;UBERON:0007811!1.41e-24!129;UBERON:0002420!2.19e-18!9;UBERON:0007245!2.19e-18!9;UBERON:0010009!2.19e-18!9;UBERON:0010011!2.19e-18!9;UBERON:0000454!2.19e-18!9;UBERON:0003076!2.77e-18!15;UBERON:0003057!2.77e-18!15;UBERON:0002308!6.98e-18!9;UBERON:0000125!6.98e-18!9;UBERON:0004732!4.00e-15!13;UBERON:0009663!3.19e-14!7;UBERON:0001871!2.24e-13!7;UBERON:0004733!2.45e-13!12;UBERON:0002028!2.45e-13!12;UBERON:0007277!2.45e-13!12;UBERON:0000200!3.71e-13!6;UBERON:0002680!2.54e-11!9;UBERON:0001895!2.54e-11!9;UBERON:0010092!2.54e-11!9;UBERON:0001872!5.18e-11!5;UBERON:0000025!7.93e-10!194;UBERON:0002298!3.61e-09!8;UBERON:0000369!5.57e-09!4;UBERON:0002435!5.57e-09!4;UBERON:0000204!5.57e-09!4;UBERON:0010082!5.57e-09!4;UBERON:0000064!7.82e-09!219;UBERON:0000349!8.66e-08!5;UBERON:0000988!2.52e-07!3;UBERON:0002771!3.37e-07!3;UBERON:0002021!4.53e-07!5;UBERON:0005383!5.40e-07!3;UBERON:0005382!5.40e-07!3;UBERON:0006331!5.74e-07!3;UBERON:0002240!7.62e-07!3 | |ontology_enrichment_uberon=UBERON:0000073!5.50e-64!94;UBERON:0001016!5.50e-64!94;UBERON:0005743!4.78e-62!86;UBERON:0001017!8.27e-61!82;UBERON:0001049!1.39e-58!57;UBERON:0005068!1.39e-58!57;UBERON:0006241!1.39e-58!57;UBERON:0007135!1.39e-58!57;UBERON:0000955!3.50e-50!69;UBERON:0006238!3.50e-50!69;UBERON:0002346!3.39e-49!90;UBERON:0002616!7.28e-48!59;UBERON:0003075!5.50e-46!86;UBERON:0007284!5.50e-46!86;UBERON:0001893!1.37e-45!34;UBERON:0002020!1.71e-45!34;UBERON:0003528!1.71e-45!34;UBERON:0002791!1.35e-43!33;UBERON:0001869!3.89e-42!32;UBERON:0002780!4.25e-42!41;UBERON:0001890!4.25e-42!41;UBERON:0006240!4.25e-42!41;UBERON:0003080!7.02e-41!42;UBERON:0002619!3.67e-34!22;UBERON:0001950!4.69e-34!20;UBERON:0000924!5.25e-32!173;UBERON:0006601!5.25e-32!173;UBERON:0003056!7.78e-31!61;UBERON:0004121!1.77e-29!169;UBERON:0000956!1.81e-29!25;UBERON:0000203!1.81e-29!25;UBERON:0007023!3.73e-28!115;UBERON:0000033!1.90e-26!123;UBERON:0000153!1.41e-24!129;UBERON:0007811!1.41e-24!129;UBERON:0002420!2.19e-18!9;UBERON:0007245!2.19e-18!9;UBERON:0010009!2.19e-18!9;UBERON:0010011!2.19e-18!9;UBERON:0000454!2.19e-18!9;UBERON:0003076!2.77e-18!15;UBERON:0003057!2.77e-18!15;UBERON:0002308!6.98e-18!9;UBERON:0000125!6.98e-18!9;UBERON:0004732!4.00e-15!13;UBERON:0009663!3.19e-14!7;UBERON:0001871!2.24e-13!7;UBERON:0004733!2.45e-13!12;UBERON:0002028!2.45e-13!12;UBERON:0007277!2.45e-13!12;UBERON:0000200!3.71e-13!6;UBERON:0002680!2.54e-11!9;UBERON:0001895!2.54e-11!9;UBERON:0010092!2.54e-11!9;UBERON:0001872!5.18e-11!5;UBERON:0000025!7.93e-10!194;UBERON:0002298!3.61e-09!8;UBERON:0000369!5.57e-09!4;UBERON:0002435!5.57e-09!4;UBERON:0000204!5.57e-09!4;UBERON:0010082!5.57e-09!4;UBERON:0000064!7.82e-09!219;UBERON:0000349!8.66e-08!5;UBERON:0000988!2.52e-07!3;UBERON:0002771!3.37e-07!3;UBERON:0002021!4.53e-07!5;UBERON:0005383!5.40e-07!3;UBERON:0005382!5.40e-07!3;UBERON:0006331!5.74e-07!3;UBERON:0002240!7.62e-07!3 | ||
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|short_description=p4@TUBB4A | |short_description=p4@TUBB4A | ||
}} | }} |
Latest revision as of 17:01, 24 September 2015
Short description: | p4@TUBB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TUBB4A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -260bp_to_ENST00000264071, NM_006087, uc002mfg.1_5end |
EntrezGene: | TUBB4A |
HGNC: | 20774 |
UniProt: | P04350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data