FFCP PHASE1:Hg19::chr14:60097553..60097561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |EntrezGene=6252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |HGNC=10467 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3B9,Q16799 | |UniProt=A8K3B9,Q16799 | ||
|association_with_transcript=-21bp_to_ENST00000342503,NM_206852_5end | |association_with_transcript=-21bp_to_ENST00000342503,NM_206852_5end | ||
|cluster_id=chr14:60097553..60097561,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_7_at_RTN1_5end | |description=CAGE_peak_7_at_RTN1_5end | ||
|id=chr14:60097553..60097561,- | |id=chr14:60097553..60097561,- | ||
|ontology_enrichment_celltype=CL:0000047!1.28e-12!8;CL:0002319!9.48e-10!25;CL:0000540!5.41e-09!6;CL:0000031!5.41e-09!6;CL:0000404!5.41e-09!6 | |ontology_enrichment_celltype=CL:0000047!1.28e-12!8;CL:0002319!9.48e-10!25;CL:0000540!5.41e-09!6;CL:0000031!5.41e-09!6;CL:0000404!5.41e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.53e-08;2!CL:0000333;2.30e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.78e-12,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.68e-17;82!UBERON:0006215;1.42e-13;3!UBERON:0010122;7.99e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.03e-90!82;UBERON:0005743!6.28e-88!86;UBERON:0000073!6.20e-87!94;UBERON:0001016!6.20e-87!94;UBERON:0001049!1.80e-83!57;UBERON:0005068!1.80e-83!57;UBERON:0006241!1.80e-83!57;UBERON:0007135!1.80e-83!57;UBERON:0000955!1.28e-71!69;UBERON:0006238!1.28e-71!69;UBERON:0002616!5.04e-70!59;UBERON:0003075!5.58e-60!86;UBERON:0007284!5.58e-60!86;UBERON:0002780!2.66e-59!41;UBERON:0001890!2.66e-59!41;UBERON:0006240!2.66e-59!41;UBERON:0003080!1.18e-57!42;UBERON:0002346!1.23e-56!90;UBERON:0002020!2.17e-54!34;UBERON:0003528!2.17e-54!34;UBERON:0001869!2.63e-54!32;UBERON:0001893!3.79e-54!34;UBERON:0002791!3.86e-52!33;UBERON:0004121!4.09e-47!169;UBERON:0000924!1.32e-45!173;UBERON:0006601!1.32e-45!173;UBERON:0001950!4.55e-44!20;UBERON:0002619!3.11e-43!22;UBERON:0000956!8.15e-41!25;UBERON:0000203!8.15e-41!25;UBERON:0007023!1.88e-39!115;UBERON:0000033!7.25e-39!123;UBERON:0003056!1.34e-38!61;UBERON:0000153!2.34e-36!129;UBERON:0007811!2.34e-36!129;UBERON:0003076!6.88e-26!15;UBERON:0003057!6.88e-26!15;UBERON:0000025!5.06e-22!194;UBERON:0004733!1.71e-20!12;UBERON:0002028!1.71e-20!12;UBERON:0007277!1.71e-20!12;UBERON:0004732!1.06e-18!13;UBERON:0001871!1.40e-17!7;UBERON:0004111!1.46e-15!241;UBERON:0002680!7.47e-15!9;UBERON:0001895!7.47e-15!9;UBERON:0010092!7.47e-15!9;UBERON:0002420!9.36e-15!9;UBERON:0007245!9.36e-15!9;UBERON:0010009!9.36e-15!9;UBERON:0010011!9.36e-15!9;UBERON:0000454!9.36e-15!9;UBERON:0002308!9.90e-15!9;UBERON:0000125!9.90e-15!9;UBERON:0000064!2.68e-14!219;UBERON:0000200!1.33e-13!6;UBERON:0000477!3.93e-12!286;UBERON:0002021!5.75e-12!5;UBERON:0001872!1.27e-11!5;UBERON:0009663!6.17e-11!7;UBERON:0000483!1.07e-10!309;UBERON:0000119!1.89e-10!312;UBERON:0002298!1.23e-09!8;UBERON:0000369!1.90e-09!4;UBERON:0002435!1.90e-09!4;UBERON:0000204!1.90e-09!4;UBERON:0010082!1.90e-09!4;UBERON:0002037!3.21e-09!6;UBERON:0006215!3.21e-09!6;UBERON:0000475!8.08e-09!365;UBERON:0000922!8.84e-09!612;UBERON:0005383!1.32e-07!3;UBERON:0005382!1.32e-07!3;UBERON:0002771!1.58e-07!3;UBERON:0000988!1.96e-07!3;UBERON:0001896!2.28e-07!3;UBERON:0005290!2.28e-07!3;UBERON:0010096!2.28e-07!3;UBERON:0000923!4.14e-07!604;UBERON:0005291!4.14e-07!604;UBERON:0006598!4.14e-07!604;UBERON:0002532!4.14e-07!604;UBERON:0000349!4.55e-07!5;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0002240!4.73e-07!3;UBERON:0001894!5.22e-07!7;UBERON:0006222!5.22e-07!7;UBERON:0000481!7.82e-07!347 | |ontology_enrichment_uberon=UBERON:0001017!4.03e-90!82;UBERON:0005743!6.28e-88!86;UBERON:0000073!6.20e-87!94;UBERON:0001016!6.20e-87!94;UBERON:0001049!1.80e-83!57;UBERON:0005068!1.80e-83!57;UBERON:0006241!1.80e-83!57;UBERON:0007135!1.80e-83!57;UBERON:0000955!1.28e-71!69;UBERON:0006238!1.28e-71!69;UBERON:0002616!5.04e-70!59;UBERON:0003075!5.58e-60!86;UBERON:0007284!5.58e-60!86;UBERON:0002780!2.66e-59!41;UBERON:0001890!2.66e-59!41;UBERON:0006240!2.66e-59!41;UBERON:0003080!1.18e-57!42;UBERON:0002346!1.23e-56!90;UBERON:0002020!2.17e-54!34;UBERON:0003528!2.17e-54!34;UBERON:0001869!2.63e-54!32;UBERON:0001893!3.79e-54!34;UBERON:0002791!3.86e-52!33;UBERON:0004121!4.09e-47!169;UBERON:0000924!1.32e-45!173;UBERON:0006601!1.32e-45!173;UBERON:0001950!4.55e-44!20;UBERON:0002619!3.11e-43!22;UBERON:0000956!8.15e-41!25;UBERON:0000203!8.15e-41!25;UBERON:0007023!1.88e-39!115;UBERON:0000033!7.25e-39!123;UBERON:0003056!1.34e-38!61;UBERON:0000153!2.34e-36!129;UBERON:0007811!2.34e-36!129;UBERON:0003076!6.88e-26!15;UBERON:0003057!6.88e-26!15;UBERON:0000025!5.06e-22!194;UBERON:0004733!1.71e-20!12;UBERON:0002028!1.71e-20!12;UBERON:0007277!1.71e-20!12;UBERON:0004732!1.06e-18!13;UBERON:0001871!1.40e-17!7;UBERON:0004111!1.46e-15!241;UBERON:0002680!7.47e-15!9;UBERON:0001895!7.47e-15!9;UBERON:0010092!7.47e-15!9;UBERON:0002420!9.36e-15!9;UBERON:0007245!9.36e-15!9;UBERON:0010009!9.36e-15!9;UBERON:0010011!9.36e-15!9;UBERON:0000454!9.36e-15!9;UBERON:0002308!9.90e-15!9;UBERON:0000125!9.90e-15!9;UBERON:0000064!2.68e-14!219;UBERON:0000200!1.33e-13!6;UBERON:0000477!3.93e-12!286;UBERON:0002021!5.75e-12!5;UBERON:0001872!1.27e-11!5;UBERON:0009663!6.17e-11!7;UBERON:0000483!1.07e-10!309;UBERON:0000119!1.89e-10!312;UBERON:0002298!1.23e-09!8;UBERON:0000369!1.90e-09!4;UBERON:0002435!1.90e-09!4;UBERON:0000204!1.90e-09!4;UBERON:0010082!1.90e-09!4;UBERON:0002037!3.21e-09!6;UBERON:0006215!3.21e-09!6;UBERON:0000475!8.08e-09!365;UBERON:0000922!8.84e-09!612;UBERON:0005383!1.32e-07!3;UBERON:0005382!1.32e-07!3;UBERON:0002771!1.58e-07!3;UBERON:0000988!1.96e-07!3;UBERON:0001896!2.28e-07!3;UBERON:0005290!2.28e-07!3;UBERON:0010096!2.28e-07!3;UBERON:0000923!4.14e-07!604;UBERON:0005291!4.14e-07!604;UBERON:0006598!4.14e-07!604;UBERON:0002532!4.14e-07!604;UBERON:0000349!4.55e-07!5;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0002240!4.73e-07!3;UBERON:0001894!5.22e-07!7;UBERON:0006222!5.22e-07!7;UBERON:0000481!7.82e-07!347 | ||
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| ||
|short_description=p7@RTN1 | |short_description=p7@RTN1 | ||
}} | }} |
Latest revision as of 19:57, 24 September 2015
Short description: | p7@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RTN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -21bp_to_ENST00000342503, NM_206852_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | A8K3B9Q16799 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.78e-12 | 8 |