FFCP PHASE1:Hg19::chr17:42983770..42983781,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=89bp_to_U92979_5end | |||
|cluster_id=chr17:42983770..42983781,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_27_at_GFAP_5end | |||
|id=chr17:42983770..42983781,- | |||
|ontology_enrichment_celltype=CL:0000128!4.67e-13!7;CL:0000126!4.67e-13!7;CL:0000127!4.67e-13!7;CL:0002453!4.67e-13!7;CL:0002605!1.34e-12!3;CL:0002319!3.26e-09!25;CL:0000047!3.44e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.85e-20;3!CL:0000128;5.63e-09;7!CL:0000126;5.63e-09;7!CL:0000127;5.63e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.58e-20,3;CL:0000128,6.20e-09,7;CL:0000126,6.20e-09,7;CL:0000127,6.20e-09,7;CL:0002453,6.20e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.35e-20;3!UBERON:0003057;3.35e-20;3!UBERON:0006601;5.73e-13;82!UBERON:0005425;4.72e-08;1!UBERON:0006222;2.04e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p27@GFAP | |||
}} |
Latest revision as of 23:09, 24 September 2015
Short description: | p27@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 89bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.58e-20 | 3 |
oligodendrocyte | 6.20e-09 | 7 |
macroglial cell | 6.20e-09 | 7 |
astrocyte | 6.20e-09 | 7 |
oligodendrocyte precursor cell | 6.20e-09 | 7 |