FFCP PHASE1:Mm9::chr13:78339096..78339116,-: Difference between revisions
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{{FFCP|EntrezGene=13865|HGNC=|UniProt=Q32NY6|association_with_transcript=-78bp_to_ENSMUST00000091458_5end|description=CAGE_peak_12_at_Nr2f1_5end|id=chr13:78339096..78339116,-|ontology_enrichment_celltype=CL:0000221!4.82e-17!44;CL:0000133!4.82e-17!44;CL:0002319!3.51e-16!43;CL:0000055!1.80e-13!50;CL:0000540!6.35e-10!33;CL:0000047!6.35e-10!33;CL:0000031!6.35e-10!33;CL:0000404!6.35e-10!33;CL:0000393!2.78e-08!39;CL:0000211!2.78e-08!39;CL:0000333!5.82e-08!10;CL:0000095!5.82e-08!10;CL:0000243!5.82e-08!10;CL:0000123!5.82e-08!10;CL:0000125!5.82e-08!10;CL:0000030!5.82e-08!10;CL:0000339!5.82e-08!10;CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23;CL:0002453!9.93e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,1.11e-17,44;CL:0000133,1.11e-17,44;CL:0002319,9.70e-16,43;CL:0000117,1.28e-14,23;CL:0000337,1.28e-14,23;CL:0000540,1.11e-11,33;CL:0000047,1.11e-11,33;CL:0000031,1.11e-11,33;CL:0000404,1.11e-11,33;CL:0002321,7.71e-10,70;CL:0002613,1.14e-09,3;CL:0000393,1.55e-09,39;CL:0000211,1.55e-09,39;CL:0002609,3.97e-09,6;CL:0000197,2.68e-08,2;CL:0002491,2.68e-08,2;CL:0000098,2.68e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.67e-25!75;UBERON:0001016!5.67e-25!75;UBERON:0001017!1.38e-23!73;UBERON:0005743!1.38e-23!73;UBERON:0002020!2.00e-19!34;UBERON:0001049!3.97e-19!52;UBERON:0005068!3.97e-19!52;UBERON:0006241!3.97e-19!52;UBERON:0007135!3.97e-19!52;UBERON:0004121!1.20e-18!102;UBERON:0000924!1.20e-18!102;UBERON:0006601!1.20e-18!102;UBERON:0002346!1.22e-16!71;UBERON:0003075!1.22e-16!71;UBERON:0007284!1.22e-16!71;UBERON:0002791!1.05e-15!29;UBERON:0003528!1.05e-15!29;UBERON:0001893!1.05e-15!29;UBERON:0002780!1.31e-15!39;UBERON:0001890!1.31e-15!39;UBERON:0006240!1.31e-15!39;UBERON:0000955!5.25e-15!50;UBERON:0006238!5.25e-15!50;UBERON:0000033!5.60e-15!63;UBERON:0003080!6.98e-15!40;UBERON:0002616!1.36e-14!49;UBERON:0000956!2.44e-14!21;UBERON:0001869!2.44e-14!21;UBERON:0000203!2.44e-14!21;UBERON:0003056!5.09e-14!49;UBERON:0002619!1.05e-11!17;UBERON:0002021!4.53e-09!10;UBERON:0000411!4.53e-09!10;UBERON:0001950!4.53e-09!10;UBERON:0007811!2.02e-08!86;UBERON:0000153!6.41e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.29e-27,34;UBERON:0003528,2.38e-22,29;UBERON:0002791,2.38e-22,29;UBERON:0001893,2.38e-22,29;UBERON:0000956,1.54e-20,21;UBERON:0001869,1.54e-20,21;UBERON:0000203,1.54e-20,21;UBERON:0001049,8.05e-19,52;UBERON:0005068,8.05e-19,52;UBERON:0006241,8.05e-19,52;UBERON:0007135,8.05e-19,52;UBERON:0001016,1.58e-18,75;UBERON:0000073,5.56e-18,54;UBERON:0001017,2.35e-17,73;UBERON:0002780,7.73e-16,39;UBERON:0001890,7.73e-16,39;UBERON:0006240,7.73e-16,39;UBERON:0010371,8.20e-16,73;UBERON:0002021,1.25e-15,10;UBERON:0000411,1.25e-15,10;UBERON:0001950,1.25e-15,10;UBERON:0003080,2.29e-15,40;UBERON:0004121,2.54e-15,95;UBERON:0000924,2.54e-15,95;UBERON:0006601,2.54e-15,95;UBERON:0002616,5.48e-15,46;UBERON:0000955,1.34e-14,47;UBERON:0006238,1.34e-14,47;UBERON:0002346,1.43e-14,64;UBERON:0003075,1.43e-14,64;UBERON:0007284,1.43e-14,64;UBERON:0002619,3.44e-14,17;UBERON:0003056,5.51e-12,49;UBERON:0010314,1.12e-11,92;UBERON:0004766,2.68e-08,2;UBERON:0008193,2.68e-08,2;UBERON:0005913,2.68e-08,2;UBERON:0011158,2.68e-08,2;UBERON:0005744,2.68e-08,2;UBERON:0003457,2.68e-08,2;UBERON:0008001,2.68e-08,2;UBERON:0007497,2.68e-08,2;UBERON:0009955,2.68e-08,2;UBERON:0003067,2.68e-08,2;UBERON:0002546,2.68e-08,2;UBERON:0007914,2.68e-08,2;UBERON:0005253,2.68e-08,2;UBERON:0002227,2.68e-08,2;UBERON:0001846,2.68e-08,2;UBERON:0004339,2.68e-08,2;UBERON:0002105,2.68e-08,2;UBERON:0001678,2.68e-08,2;UBERON:0003128,2.68e-08,2;UBERON:0001694,2.68e-08,2;UBERON:0004681,2.68e-08,2;UBERON:0001839,2.68e-08,2;UBERON:0001690,2.68e-08,2;UBERON:0001844,2.68e-08,2;UBERON:0001849,2.68e-08,2;UBERON:0002499,2.68e-08,2;UBERON:0001855,2.68e-08,2;UBERON:0011137,2.68e-08,2;UBERON:0001703,2.68e-08,2;UBERON:0010323,2.68e-08,2;UBERON:0003129,2.68e-08,2;UBERON:0003069,2.68e-08,2;UBERON:0003051,2.68e-08,2;UBERON:0004637,2.68e-08,2;UBERON:0004761,2.68e-08,2;UBERON:0010113,2.68e-08,2;UBERON:0009123,2.68e-08,2;UBERON:0010351,2.68e-08,2;UBERON:0009617,2.68e-08,2;UBERON:0005641,2.68e-08,2;UBERON:0010349,2.68e-08,2;UBERON:0004111,9.16e-08,122|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,1.56478268869608,0.872100625521786,0.439372365468944,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.01158230429799,0,0,0,2.66788438833342,0.449949858640699,0,0,0.898800331555214,0.384218305321555,1.65903379693564,2.56511282830212,2.73422449756797,0.571301968807607,1.10434270475807,0.61245399607477,1.15014565221884,0,0,0.383062014255563,0,1.05509030184155,1.55528994124096,1.04182674111352,0.279182999001381,0,0.30559649555362,1.76777151284201,1.28134512719193,0.745597783301202,0.454357159999104,1.058001841495,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,6.19711047017394,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13865 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q32NY6 | |||
|association_with_transcript=-78bp_to_ENSMUST00000091458_5end | |||
|cluster_id=chr13:78339096..78339116,- | |||
|description=CAGE_peak_12_at_Nr2f1_5end | |||
|id=chr13:78339096..78339116,- | |||
|ontology_enrichment_celltype=CL:0000221!4.82e-17!44;CL:0000133!4.82e-17!44;CL:0002319!3.51e-16!43;CL:0000055!1.80e-13!50;CL:0000540!6.35e-10!33;CL:0000047!6.35e-10!33;CL:0000031!6.35e-10!33;CL:0000404!6.35e-10!33;CL:0000393!2.78e-08!39;CL:0000211!2.78e-08!39;CL:0000333!5.82e-08!10;CL:0000095!5.82e-08!10;CL:0000243!5.82e-08!10;CL:0000123!5.82e-08!10;CL:0000125!5.82e-08!10;CL:0000030!5.82e-08!10;CL:0000339!5.82e-08!10;CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23;CL:0002453!9.93e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.11e-17,44;CL:0000133,1.11e-17,44;CL:0002319,9.70e-16,43;CL:0000117,1.28e-14,23;CL:0000337,1.28e-14,23;CL:0000540,1.11e-11,33;CL:0000047,1.11e-11,33;CL:0000031,1.11e-11,33;CL:0000404,1.11e-11,33;CL:0002321,7.71e-10,70;CL:0002613,1.14e-09,3;CL:0000393,1.55e-09,39;CL:0000211,1.55e-09,39;CL:0002609,3.97e-09,6;CL:0000197,2.68e-08,2;CL:0002491,2.68e-08,2;CL:0000098,2.68e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.67e-25!75;UBERON:0001016!5.67e-25!75;UBERON:0001017!1.38e-23!73;UBERON:0005743!1.38e-23!73;UBERON:0002020!2.00e-19!34;UBERON:0001049!3.97e-19!52;UBERON:0005068!3.97e-19!52;UBERON:0006241!3.97e-19!52;UBERON:0007135!3.97e-19!52;UBERON:0004121!1.20e-18!102;UBERON:0000924!1.20e-18!102;UBERON:0006601!1.20e-18!102;UBERON:0002346!1.22e-16!71;UBERON:0003075!1.22e-16!71;UBERON:0007284!1.22e-16!71;UBERON:0002791!1.05e-15!29;UBERON:0003528!1.05e-15!29;UBERON:0001893!1.05e-15!29;UBERON:0002780!1.31e-15!39;UBERON:0001890!1.31e-15!39;UBERON:0006240!1.31e-15!39;UBERON:0000955!5.25e-15!50;UBERON:0006238!5.25e-15!50;UBERON:0000033!5.60e-15!63;UBERON:0003080!6.98e-15!40;UBERON:0002616!1.36e-14!49;UBERON:0000956!2.44e-14!21;UBERON:0001869!2.44e-14!21;UBERON:0000203!2.44e-14!21;UBERON:0003056!5.09e-14!49;UBERON:0002619!1.05e-11!17;UBERON:0002021!4.53e-09!10;UBERON:0000411!4.53e-09!10;UBERON:0001950!4.53e-09!10;UBERON:0007811!2.02e-08!86;UBERON:0000153!6.41e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.29e-27,34;UBERON:0003528,2.38e-22,29;UBERON:0002791,2.38e-22,29;UBERON:0001893,2.38e-22,29;UBERON:0000956,1.54e-20,21;UBERON:0001869,1.54e-20,21;UBERON:0000203,1.54e-20,21;UBERON:0001049,8.05e-19,52;UBERON:0005068,8.05e-19,52;UBERON:0006241,8.05e-19,52;UBERON:0007135,8.05e-19,52;UBERON:0001016,1.58e-18,75;UBERON:0000073,5.56e-18,54;UBERON:0001017,2.35e-17,73;UBERON:0002780,7.73e-16,39;UBERON:0001890,7.73e-16,39;UBERON:0006240,7.73e-16,39;UBERON:0010371,8.20e-16,73;UBERON:0002021,1.25e-15,10;UBERON:0000411,1.25e-15,10;UBERON:0001950,1.25e-15,10;UBERON:0003080,2.29e-15,40;UBERON:0004121,2.54e-15,95;UBERON:0000924,2.54e-15,95;UBERON:0006601,2.54e-15,95;UBERON:0002616,5.48e-15,46;UBERON:0000955,1.34e-14,47;UBERON:0006238,1.34e-14,47;UBERON:0002346,1.43e-14,64;UBERON:0003075,1.43e-14,64;UBERON:0007284,1.43e-14,64;UBERON:0002619,3.44e-14,17;UBERON:0003056,5.51e-12,49;UBERON:0010314,1.12e-11,92;UBERON:0004766,2.68e-08,2;UBERON:0008193,2.68e-08,2;UBERON:0005913,2.68e-08,2;UBERON:0011158,2.68e-08,2;UBERON:0005744,2.68e-08,2;UBERON:0003457,2.68e-08,2;UBERON:0008001,2.68e-08,2;UBERON:0007497,2.68e-08,2;UBERON:0009955,2.68e-08,2;UBERON:0003067,2.68e-08,2;UBERON:0002546,2.68e-08,2;UBERON:0007914,2.68e-08,2;UBERON:0005253,2.68e-08,2;UBERON:0002227,2.68e-08,2;UBERON:0001846,2.68e-08,2;UBERON:0004339,2.68e-08,2;UBERON:0002105,2.68e-08,2;UBERON:0001678,2.68e-08,2;UBERON:0003128,2.68e-08,2;UBERON:0001694,2.68e-08,2;UBERON:0004681,2.68e-08,2;UBERON:0001839,2.68e-08,2;UBERON:0001690,2.68e-08,2;UBERON:0001844,2.68e-08,2;UBERON:0001849,2.68e-08,2;UBERON:0002499,2.68e-08,2;UBERON:0001855,2.68e-08,2;UBERON:0011137,2.68e-08,2;UBERON:0001703,2.68e-08,2;UBERON:0010323,2.68e-08,2;UBERON:0003129,2.68e-08,2;UBERON:0003069,2.68e-08,2;UBERON:0003051,2.68e-08,2;UBERON:0004637,2.68e-08,2;UBERON:0004761,2.68e-08,2;UBERON:0010113,2.68e-08,2;UBERON:0009123,2.68e-08,2;UBERON:0010351,2.68e-08,2;UBERON:0009617,2.68e-08,2;UBERON:0005641,2.68e-08,2;UBERON:0010349,2.68e-08,2;UBERON:0004111,9.16e-08,122 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,1.56478268869608,0.872100625521786,0.439372365468944,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.01158230429799,0,0,0,2.66788438833342,0.449949858640699,0,0,0.898800331555214,0.384218305321555,1.65903379693564,2.56511282830212,2.73422449756797,0.571301968807607,1.10434270475807,0.61245399607477,1.15014565221884,0,0,0.383062014255563,0,1.05509030184155,1.55528994124096,1.04182674111352,0.279182999001381,0,0.30559649555362,1.76777151284201,1.28134512719193,0.745597783301202,0.454357159999104,1.058001841495,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,6.19711047017394,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376963056338593,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0,0.390361328888111,0,0.180062129805349,0.60281927134286,0,0.12811372028485,0.281105173679186,0,0,0,0,0,0.278047249225598,0,0,1.39323986772945,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0.630869845692382,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.456994050438915,0,0.610953983535943,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0.655739781506702,0,0,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.108005340821801,0.209088296014469,0,0.404593039154462,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0.51968329191118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,2.76195141904306,4.58316410751517,2.57779773515531,1.37016503954128,1.5107877947794,1.35004500046361,0.45032120322422,0.906284817968409,1.55328093525546,1.45302286617847,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0,0.29551344712669,0.409231043169689,0,0.578719832943424,0.249810577937946,0.935726433781634,0.214871054048298,0,0,0 | |||
|short_description=p12@Nr2f1 | |||
}} |
Latest revision as of 23:05, 1 October 2015
Short description: | p12@Nr2f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Nr2f1_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENSMUST00000091458_5end |
EntrezGene: | Nr2f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.11e-17 | 44 |
neurectodermal cell | 1.11e-17 | 44 |
neural cell | 9.70e-16 | 43 |
CNS neuron (sensu Vertebrata) | 1.28e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-14 | 23 |
neuron | 1.11e-11 | 33 |
neuronal stem cell | 1.11e-11 | 33 |
neuroblast | 1.11e-11 | 33 |
electrically signaling cell | 1.11e-11 | 33 |
embryonic cell | 7.71e-10 | 70 |
striatum neuron | 1.14e-09 | 3 |
electrically responsive cell | 1.55e-09 | 39 |
electrically active cell | 1.55e-09 | 39 |
neuron of cerebral cortex | 3.97e-09 | 6 |
receptor cell | 2.68e-08 | 2 |
auditory epithelial cell | 2.68e-08 | 2 |
sensory epithelial cell | 2.68e-08 | 2 |