FFCP PHASE1:Hg19::chr6:31021973..31021990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285834 | |EntrezGene=285834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27780 | |HGNC=27780 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | |association_with_transcript=0bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | ||
|cluster_id=chr6:31021973..31021990,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_HCG22_5end | |description=CAGE_peak_1_at_HCG22_5end | ||
|id=chr6:31021973..31021990,+ | |id=chr6:31021973..31021990,+ | ||
|ontology_enrichment_celltype=CL:0002605!5.69e-08!3;CL:0000064!2.54e-07!3;CL:0005012!2.54e-07!3;CL:0000067!2.54e-07!3;CL:0002304!2.54e-07!3;CL:0000047!4.80e-07!8 | |ontology_enrichment_celltype=CL:0002605!5.69e-08!3;CL:0000064!2.54e-07!3;CL:0005012!2.54e-07!3;CL:0000067!2.54e-07!3;CL:0002304!2.54e-07!3;CL:0000047!4.80e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.54e-15;2!CL:0002605;6.44e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.69e-11,3;CL:0000047,1.03e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.13e-24;3!UBERON:0003057;9.13e-24;3!UBERON:0006601;1.47e-09;82!UBERON:0006222;1.27e-08;1!UBERON:0005425;1.27e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;7.20e-31;6!UBERON:0002240;9.13e-24;3!UBERON:0005174;9.13e-24;3!UBERON:0001137;9.13e-24;3!UBERON:0001896;2.55e-23;3!UBERON:0005290;2.55e-23;3!UBERON:0004732;4.53e-20;13!UBERON:0000073;5.61e-20;53!UBERON:0002616;5.61e-20;53!UBERON:0001954;1.27e-16;2!UBERON:0003022;1.27e-16;2!UBERON:0002421;1.27e-16;2!UBERON:0002600;1.27e-16;2!UBERON:0005162;6.52e-16;2!UBERON:0000122;6.52e-16;2!UBERON:0004733;2.15e-15;12!UBERON:0002028;2.15e-15;12!UBERON:0002780;2.14e-14;41!UBERON:0001890;2.14e-14;41!UBERON:0000349;2.49e-14;5!UBERON:0001016;7.10e-13;83!UBERON:0001017;2.09e-12;75!UBERON:0000988;1.14e-10;3!UBERON:0001723;1.14e-10;3!UBERON:0001033;1.14e-10;3!UBERON:0001893;1.18e-10;34!UBERON:0003528;4.97e-10;34!UBERON:0002020;4.97e-10;34!UBERON:0002791;6.01e-10;32!UBERON:0000956;6.47e-10;25!UBERON:0000203;6.47e-10;25!UBERON:0002336;5.27e-09;1!UBERON:0011215;5.27e-09;1!UBERON:0001018;5.27e-09;1!UBERON:0002473;5.27e-09;1!UBERON:0005340;5.27e-09;1!UBERON:0003544;5.27e-09;1!UBERON:0005970;5.27e-09;1!UBERON:0002316;5.27e-09;1!UBERON:0001020;5.27e-09;1!UBERON:0002437;5.27e-09;1!UBERON:0002372;1.27e-08;1!UBERON:0002038;1.27e-08;1!UBERON:0003112;1.27e-08;1!UBERON:0000941;1.27e-08;1!UBERON:0001785;1.27e-08;1!UBERON:0002464;1.27e-08;1!UBERON:0004904;1.27e-08;1!UBERON:0011158;1.27e-08;1!UBERON:0001961;1.27e-08;1!UBERON:0001021;1.27e-08;1!UBERON:0001744;1.27e-08;1!UBERON:0009661;1.27e-08;1!UBERON:0002950;1.27e-08;1!UBERON:0003128;1.27e-08;1!UBERON:0001042;1.27e-08;1!UBERON:0001891;1.27e-08;1!UBERON:0001735;1.27e-08;1!UBERON:0001703;1.27e-08;1!UBERON:0002241;1.27e-08;1!UBERON:0000955;8.47e-08;68!UBERON:0001869;8.71e-08;32!UBERON:0007023;5.19e-07;114 | |||
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| ||
|short_description=p1@HCG22 | |short_description=p1@HCG22 | ||
}} | }} |
Latest revision as of 19:41, 17 September 2015
Short description: | p1@HCG22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCG22_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000426185, NR_003948, uc003nsj.1, uc010jsi.1_5end |
EntrezGene: | HCG22 |
HGNC: | 27780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.69e-11 | 3 |
neuronal stem cell | 1.03e-08 | 8 |