FFCP PHASE1:Hg19::chr6:70992888..70992906,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1297 | |EntrezGene=1297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2217 | |HGNC=2217 | ||
|TSSclassifier=strong | |||
|UniProt=P20849 | |UniProt=P20849 | ||
|association_with_transcript=4bp_to_NM_078485,uc003pff.3_5end | |association_with_transcript=4bp_to_NM_078485,uc003pff.3_5end | ||
|cluster_id=chr6:70992888..70992906,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_COL9A1_5end | |description=CAGE_peak_1_at_COL9A1_5end | ||
|id=chr6:70992888..70992906,- | |id=chr6:70992888..70992906,- | ||
|ontology_enrichment_celltype=CL:0002322!3.08e-08!5 | |ontology_enrichment_celltype=CL:0002322!3.08e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.94e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.19e-11,5;CL:0000047,1.05e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-16;82!UBERON:0006241;6.42e-08;3!UBERON:0003057;6.42e-08;3!UBERON:0006215;5.52e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.30e-73!57;UBERON:0005068!1.30e-73!57;UBERON:0006241!1.30e-73!57;UBERON:0007135!1.30e-73!57;UBERON:0001017!7.23e-71!82;UBERON:0005743!2.46e-69!86;UBERON:0003075!3.27e-65!86;UBERON:0007284!3.27e-65!86;UBERON:0000073!3.87e-65!94;UBERON:0001016!3.87e-65!94;UBERON:0002616!1.22e-61!59;UBERON:0002346!2.20e-61!90;UBERON:0007023!1.21e-58!115;UBERON:0000955!1.25e-58!69;UBERON:0006238!1.25e-58!69;UBERON:0002780!1.69e-56!41;UBERON:0001890!1.69e-56!41;UBERON:0006240!1.69e-56!41;UBERON:0003080!7.59e-55!42;UBERON:0002020!3.39e-47!34;UBERON:0003528!3.39e-47!34;UBERON:0001893!3.89e-47!34;UBERON:0003056!3.88e-46!61;UBERON:0002791!1.00e-45!33;UBERON:0001869!8.64e-44!32;UBERON:0000153!7.42e-43!129;UBERON:0007811!7.42e-43!129;UBERON:0004121!1.20e-42!169;UBERON:0000924!4.14e-41!173;UBERON:0006601!4.14e-41!173;UBERON:0000033!5.43e-40!123;UBERON:0000956!1.50e-33!25;UBERON:0000203!1.50e-33!25;UBERON:0002619!3.34e-33!22;UBERON:0001950!4.74e-30!20;UBERON:0003076!5.82e-19!15;UBERON:0003057!5.82e-19!15;UBERON:0000025!1.03e-16!194;UBERON:0004732!4.15e-16!13;UBERON:0000064!3.33e-15!219;UBERON:0002308!6.00e-15!9;UBERON:0000125!6.00e-15!9;UBERON:0002420!9.29e-15!9;UBERON:0007245!9.29e-15!9;UBERON:0010009!9.29e-15!9;UBERON:0010011!9.29e-15!9;UBERON:0000454!9.29e-15!9;UBERON:0004733!1.23e-14!12;UBERON:0002028!1.23e-14!12;UBERON:0007277!1.23e-14!12;UBERON:0000477!1.53e-14!286;UBERON:0004111!4.65e-14!241;UBERON:0001871!1.87e-12!7;UBERON:0000922!2.60e-12!612;UBERON:0009663!6.41e-12!7;UBERON:0000483!1.13e-11!309;UBERON:0000119!2.30e-11!312;UBERON:0002298!1.48e-10!8;UBERON:0001894!1.58e-10!7;UBERON:0006222!1.58e-10!7;UBERON:0002680!2.49e-10!9;UBERON:0001895!2.49e-10!9;UBERON:0010092!2.49e-10!9;UBERON:0000481!2.93e-10!347;UBERON:0000468!3.74e-10!659;UBERON:0000475!5.26e-10!365;UBERON:0000062!8.56e-10!511;UBERON:0000200!8.91e-10!6;UBERON:0000349!5.16e-09!5;UBERON:0002050!1.15e-08!605;UBERON:0005423!1.15e-08!605;UBERON:0001872!1.87e-08!5;UBERON:0002021!2.15e-08!5;UBERON:0000923!3.47e-08!604;UBERON:0005291!3.47e-08!604;UBERON:0006598!3.47e-08!604;UBERON:0002532!3.47e-08!604;UBERON:0000467!1.97e-07!625;UBERON:0000480!2.26e-07!626;UBERON:0000369!2.40e-07!4;UBERON:0002435!2.40e-07!4;UBERON:0000204!2.40e-07!4;UBERON:0010082!2.40e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!1.30e-73!57;UBERON:0005068!1.30e-73!57;UBERON:0006241!1.30e-73!57;UBERON:0007135!1.30e-73!57;UBERON:0001017!7.23e-71!82;UBERON:0005743!2.46e-69!86;UBERON:0003075!3.27e-65!86;UBERON:0007284!3.27e-65!86;UBERON:0000073!3.87e-65!94;UBERON:0001016!3.87e-65!94;UBERON:0002616!1.22e-61!59;UBERON:0002346!2.20e-61!90;UBERON:0007023!1.21e-58!115;UBERON:0000955!1.25e-58!69;UBERON:0006238!1.25e-58!69;UBERON:0002780!1.69e-56!41;UBERON:0001890!1.69e-56!41;UBERON:0006240!1.69e-56!41;UBERON:0003080!7.59e-55!42;UBERON:0002020!3.39e-47!34;UBERON:0003528!3.39e-47!34;UBERON:0001893!3.89e-47!34;UBERON:0003056!3.88e-46!61;UBERON:0002791!1.00e-45!33;UBERON:0001869!8.64e-44!32;UBERON:0000153!7.42e-43!129;UBERON:0007811!7.42e-43!129;UBERON:0004121!1.20e-42!169;UBERON:0000924!4.14e-41!173;UBERON:0006601!4.14e-41!173;UBERON:0000033!5.43e-40!123;UBERON:0000956!1.50e-33!25;UBERON:0000203!1.50e-33!25;UBERON:0002619!3.34e-33!22;UBERON:0001950!4.74e-30!20;UBERON:0003076!5.82e-19!15;UBERON:0003057!5.82e-19!15;UBERON:0000025!1.03e-16!194;UBERON:0004732!4.15e-16!13;UBERON:0000064!3.33e-15!219;UBERON:0002308!6.00e-15!9;UBERON:0000125!6.00e-15!9;UBERON:0002420!9.29e-15!9;UBERON:0007245!9.29e-15!9;UBERON:0010009!9.29e-15!9;UBERON:0010011!9.29e-15!9;UBERON:0000454!9.29e-15!9;UBERON:0004733!1.23e-14!12;UBERON:0002028!1.23e-14!12;UBERON:0007277!1.23e-14!12;UBERON:0000477!1.53e-14!286;UBERON:0004111!4.65e-14!241;UBERON:0001871!1.87e-12!7;UBERON:0000922!2.60e-12!612;UBERON:0009663!6.41e-12!7;UBERON:0000483!1.13e-11!309;UBERON:0000119!2.30e-11!312;UBERON:0002298!1.48e-10!8;UBERON:0001894!1.58e-10!7;UBERON:0006222!1.58e-10!7;UBERON:0002680!2.49e-10!9;UBERON:0001895!2.49e-10!9;UBERON:0010092!2.49e-10!9;UBERON:0000481!2.93e-10!347;UBERON:0000468!3.74e-10!659;UBERON:0000475!5.26e-10!365;UBERON:0000062!8.56e-10!511;UBERON:0000200!8.91e-10!6;UBERON:0000349!5.16e-09!5;UBERON:0002050!1.15e-08!605;UBERON:0005423!1.15e-08!605;UBERON:0001872!1.87e-08!5;UBERON:0002021!2.15e-08!5;UBERON:0000923!3.47e-08!604;UBERON:0005291!3.47e-08!604;UBERON:0006598!3.47e-08!604;UBERON:0002532!3.47e-08!604;UBERON:0000467!1.97e-07!625;UBERON:0000480!2.26e-07!626;UBERON:0000369!2.40e-07!4;UBERON:0002435!2.40e-07!4;UBERON:0000204!2.40e-07!4;UBERON:0010082!2.40e-07!4 | ||
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|short_description=p1@COL9A1 | |short_description=p1@COL9A1 | ||
}} | }} |
Latest revision as of 15:23, 19 September 2015
Short description: | p1@COL9A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL9A1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 4bp_to_NM_078485, uc003pff.3_5end |
EntrezGene: | COL9A1 |
HGNC: | 2217 |
UniProt: | P20849 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.19e-11 | 5 |
neuronal stem cell | 1.05e-08 | 8 |