FFCP PHASE1:Hg19::chr12:75603482..75603534,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3747 | |EntrezGene=3747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6234 | |HGNC=6234 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PR1 | |UniProt=Q96PR1 | ||
|association_with_transcript=0bp_to_ENST00000298972,ENST00000341669,ENST00000350228,NM_139136,NM_139137,NM_153748,uc001sxe.2,uc001sxf.2,uc001sxg.1,uc010stw.1_5end | |association_with_transcript=0bp_to_ENST00000298972,ENST00000341669,ENST00000350228,NM_139136,NM_139137,NM_153748,uc001sxe.2,uc001sxf.2,uc001sxg.1,uc010stw.1_5end | ||
|cluster_id=chr12:75603482..75603534,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_KCNC2_5end | |description=CAGE_peak_1_at_KCNC2_5end | ||
|id=chr12:75603482..75603534,- | |id=chr12:75603482..75603534,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.21e-20;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.40e-81!82;UBERON:0001049!6.11e-81!57;UBERON:0005068!6.11e-81!57;UBERON:0006241!6.11e-81!57;UBERON:0007135!6.11e-81!57;UBERON:0005743!2.41e-80!86;UBERON:0000073!2.25e-74!94;UBERON:0001016!2.25e-74!94;UBERON:0000955!1.11e-70!69;UBERON:0006238!1.11e-70!69;UBERON:0002780!1.73e-68!41;UBERON:0001890!1.73e-68!41;UBERON:0006240!1.73e-68!41;UBERON:0002616!4.23e-67!59;UBERON:0003080!1.17e-66!42;UBERON:0001893!2.52e-60!34;UBERON:0003075!3.15e-60!86;UBERON:0007284!3.15e-60!86;UBERON:0001869!4.90e-60!32;UBERON:0002020!6.28e-60!34;UBERON:0003528!6.28e-60!34;UBERON:0002791!1.19e-57!33;UBERON:0002346!5.40e-57!90;UBERON:0002619!1.76e-55!22;UBERON:0001950!1.72e-50!20;UBERON:0003056!1.49e-48!61;UBERON:0000956!2.70e-48!25;UBERON:0000203!2.70e-48!25;UBERON:0007023!2.19e-46!115;UBERON:0000033!5.01e-42!123;UBERON:0004121!2.61e-40!169;UBERON:0000153!1.77e-39!129;UBERON:0007811!1.77e-39!129;UBERON:0000924!4.73e-39!173;UBERON:0006601!4.73e-39!173;UBERON:0000025!8.05e-22!194;UBERON:0004111!1.07e-18!241;UBERON:0000200!1.76e-17!6;UBERON:0001871!7.55e-17!7;UBERON:0000477!2.67e-15!286;UBERON:0003076!3.10e-15!15;UBERON:0003057!3.10e-15!15;UBERON:0001872!1.75e-14!5;UBERON:0002021!1.90e-14!5;UBERON:0000349!4.52e-14!5;UBERON:0002420!2.25e-13!9;UBERON:0007245!2.25e-13!9;UBERON:0010009!2.25e-13!9;UBERON:0010011!2.25e-13!9;UBERON:0000454!2.25e-13!9;UBERON:0000483!3.41e-13!309;UBERON:0000475!4.03e-13!365;UBERON:0002308!4.79e-13!9;UBERON:0000125!4.79e-13!9;UBERON:0000119!6.17e-13!312;UBERON:0002298!1.82e-11!8;UBERON:0000064!1.87e-11!219;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0004733!1.00e-09!12;UBERON:0002028!1.00e-09!12;UBERON:0007277!1.00e-09!12;UBERON:0001894!1.52e-09!7;UBERON:0006222!1.52e-09!7;UBERON:0002771!1.94e-09!3;UBERON:0000062!2.38e-09!511;UBERON:0009663!6.80e-09!7;UBERON:0004732!6.82e-09!13;UBERON:0000988!9.32e-09!3;UBERON:0001896!1.79e-08!3;UBERON:0005290!1.79e-08!3;UBERON:0010096!1.79e-08!3;UBERON:0000481!2.69e-08!347;UBERON:0002240!3.58e-08!3;UBERON:0005383!4.28e-08!3;UBERON:0005382!4.28e-08!3;UBERON:0000922!1.14e-07!612;UBERON:0000923!2.06e-07!604;UBERON:0005291!2.06e-07!604;UBERON:0006598!2.06e-07!604;UBERON:0002532!2.06e-07!604;UBERON:0002050!2.25e-07!605;UBERON:0005423!2.25e-07!605;UBERON:0000467!3.73e-07!625;UBERON:0000480!4.08e-07!626;UBERON:0001870!4.49e-07!2 | |ontology_enrichment_uberon=UBERON:0001017!1.40e-81!82;UBERON:0001049!6.11e-81!57;UBERON:0005068!6.11e-81!57;UBERON:0006241!6.11e-81!57;UBERON:0007135!6.11e-81!57;UBERON:0005743!2.41e-80!86;UBERON:0000073!2.25e-74!94;UBERON:0001016!2.25e-74!94;UBERON:0000955!1.11e-70!69;UBERON:0006238!1.11e-70!69;UBERON:0002780!1.73e-68!41;UBERON:0001890!1.73e-68!41;UBERON:0006240!1.73e-68!41;UBERON:0002616!4.23e-67!59;UBERON:0003080!1.17e-66!42;UBERON:0001893!2.52e-60!34;UBERON:0003075!3.15e-60!86;UBERON:0007284!3.15e-60!86;UBERON:0001869!4.90e-60!32;UBERON:0002020!6.28e-60!34;UBERON:0003528!6.28e-60!34;UBERON:0002791!1.19e-57!33;UBERON:0002346!5.40e-57!90;UBERON:0002619!1.76e-55!22;UBERON:0001950!1.72e-50!20;UBERON:0003056!1.49e-48!61;UBERON:0000956!2.70e-48!25;UBERON:0000203!2.70e-48!25;UBERON:0007023!2.19e-46!115;UBERON:0000033!5.01e-42!123;UBERON:0004121!2.61e-40!169;UBERON:0000153!1.77e-39!129;UBERON:0007811!1.77e-39!129;UBERON:0000924!4.73e-39!173;UBERON:0006601!4.73e-39!173;UBERON:0000025!8.05e-22!194;UBERON:0004111!1.07e-18!241;UBERON:0000200!1.76e-17!6;UBERON:0001871!7.55e-17!7;UBERON:0000477!2.67e-15!286;UBERON:0003076!3.10e-15!15;UBERON:0003057!3.10e-15!15;UBERON:0001872!1.75e-14!5;UBERON:0002021!1.90e-14!5;UBERON:0000349!4.52e-14!5;UBERON:0002420!2.25e-13!9;UBERON:0007245!2.25e-13!9;UBERON:0010009!2.25e-13!9;UBERON:0010011!2.25e-13!9;UBERON:0000454!2.25e-13!9;UBERON:0000483!3.41e-13!309;UBERON:0000475!4.03e-13!365;UBERON:0002308!4.79e-13!9;UBERON:0000125!4.79e-13!9;UBERON:0000119!6.17e-13!312;UBERON:0002298!1.82e-11!8;UBERON:0000064!1.87e-11!219;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0004733!1.00e-09!12;UBERON:0002028!1.00e-09!12;UBERON:0007277!1.00e-09!12;UBERON:0001894!1.52e-09!7;UBERON:0006222!1.52e-09!7;UBERON:0002771!1.94e-09!3;UBERON:0000062!2.38e-09!511;UBERON:0009663!6.80e-09!7;UBERON:0004732!6.82e-09!13;UBERON:0000988!9.32e-09!3;UBERON:0001896!1.79e-08!3;UBERON:0005290!1.79e-08!3;UBERON:0010096!1.79e-08!3;UBERON:0000481!2.69e-08!347;UBERON:0002240!3.58e-08!3;UBERON:0005383!4.28e-08!3;UBERON:0005382!4.28e-08!3;UBERON:0000922!1.14e-07!612;UBERON:0000923!2.06e-07!604;UBERON:0005291!2.06e-07!604;UBERON:0006598!2.06e-07!604;UBERON:0002532!2.06e-07!604;UBERON:0002050!2.25e-07!605;UBERON:0005423!2.25e-07!605;UBERON:0000467!3.73e-07!625;UBERON:0000480!4.08e-07!626;UBERON:0001870!4.49e-07!2 | ||
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| ||
|short_description=p1@KCNC2 | |short_description=p1@KCNC2 | ||
}} | }} |
Latest revision as of 19:31, 24 September 2015
Short description: | p1@KCNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNC2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000298972, ENST00000341669, ENST00000350228, NM_139136, NM_139137, NM_153748, uc001sxe.2, uc001sxf.2, uc001sxg.1, uc010stw.1_5end |
EntrezGene: | KCNC2 |
HGNC: | 6234 |
UniProt: | Q96PR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data